RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 CDKL1Q00532 357 aa21.65■■□□□ 1.06
BRF1-216ENST00000550208 LGSNQ5TDP6 509 aa21.65■■□□□ 1.06
BRF1-216ENST00000550208 PRAMEF17Q5VTA0 474 aa21.65■■□□□ 1.06
BRF1-216ENST00000550208 CYB5D1Q6P9G0 228 aa21.65■■□□□ 1.06
BRF1-216ENST00000550208 FRA10AC1Q70Z53 315 aa21.65■■□□□ 1.06
BRF1-216ENST00000550208 GPSM1Q86YR5 675 aa21.65■■□□□ 1.06
BRF1-216ENST00000550208 MCATQ8IVS2 390 aaKnown RBP21.65■■□□□ 1.06
BRF1-216ENST00000550208 CENPLQ8N0S6 344 aaPredicted RBP21.65■■□□□ 1.06
BRF1-216ENST00000550208 OR56A3Q8NH54 315 aa21.65■■□□□ 1.06
BRF1-216ENST00000550208 ATL1Q8WXF7 558 aa21.65■■□□□ 1.06
BRF1-216ENST00000550208 ISL2Q96A47 359 aa21.65■■□□□ 1.06
BRF1-216ENST00000550208 PYCR2Q96C36 320 aa21.65■■□□□ 1.06
BRF1-216ENST00000550208 EGFL8Q99944 293 aa21.65■■□□□ 1.06
BRF1-216ENST00000550208 SGPP1Q9BX95 441 aa21.65■■□□□ 1.06
BRF1-216ENST00000550208 ALG9Q9H6U8 611 aa21.65■■□□□ 1.06
BRF1-216ENST00000550208 FETUBQ9UGM5 382 aa21.65■■□□□ 1.06
BRF1-216ENST00000550208 SERTAD3Q9UJW9 196 aa21.65■■□□□ 1.06
BRF1-216ENST00000550208 KLK4Q9Y5K2 254 aa21.65■■□□□ 1.06
BRF1-216ENST00000550208 SDK2Q58EX2 2172 aa21.64■■□□□ 1.06
BRF1-216ENST00000550208 IGKV1-8A0A0C4DH67 115 aa21.64■■□□□ 1.05
BRF1-216ENST00000550208 NRP2O60462 931 aa21.64■■□□□ 1.05
BRF1-216ENST00000550208 KRT37O76014 449 aa21.64■■□□□ 1.05
BRF1-216ENST00000550208 STK17BO94768 372 aa21.64■■□□□ 1.05
BRF1-216ENST00000550208 KIAA0754O94854 1291 aa21.64■■□□□ 1.05
BRF1-216ENST00000550208 MSL3P1P0C860 447 aa21.64■■□□□ 1.05
BRF1-216ENST00000550208 TFEBP19484 476 aa21.64■■□□□ 1.05
BRF1-216ENST00000550208 ABATP80404 500 aa21.64■■□□□ 1.05
BRF1-216ENST00000550208 TGFBIQ15582 683 aa21.64■■□□□ 1.05
BRF1-216ENST00000550208 ST3GAL2Q16842 350 aa21.64■■□□□ 1.05
BRF1-216ENST00000550208 C18orf21Q32NC0 220 aaPredicted RBP21.64■■□□□ 1.05
BRF1-216ENST00000550208 TAF1BQ53T94 588 aaPredicted RBP21.64■■□□□ 1.05
BRF1-216ENST00000550208 PRAMEF13Q5VWM6 474 aa21.64■■□□□ 1.05
BRF1-216ENST00000550208 CAPN13Q6MZZ7 669 aaPredicted RBP21.64■■□□□ 1.05
BRF1-216ENST00000550208 FBXO42Q6P3S6 717 aa21.64■■□□□ 1.05
BRF1-216ENST00000550208 TIPARPQ7Z3E1 657 aaKnown RBP21.64■■□□□ 1.05
BRF1-216ENST00000550208 CCDC91Q7Z6B0 441 aa21.64■■□□□ 1.05
BRF1-216ENST00000550208 DTX1Q86Y01 620 aa21.64■■□□□ 1.05
BRF1-216ENST00000550208 PLD6Q8N2A8 252 aaKnown RBP21.64■■□□□ 1.05
BRF1-216ENST00000550208 OR8K5Q8NH50 307 aa21.64■■□□□ 1.05
BRF1-216ENST00000550208 KCNE4Q8WWG9 221 aa21.64■■□□□ 1.05
BRF1-216ENST00000550208 FCRL4Q96PJ5 515 aa21.64■■□□□ 1.05
BRF1-216ENST00000550208 SPRTNQ9H040 489 aaPredicted RBP21.64■■□□□ 1.05
BRF1-216ENST00000550208 FANCEQ9HB96 536 aa21.64■■□□□ 1.05
BRF1-216ENST00000550208 PILRAQ9UKJ1 303 aa21.64■■□□□ 1.05
BRF1-216ENST00000550208 RAB21Q9UL25 225 aa21.64■■□□□ 1.05
BRF1-216ENST00000550208 PLCL2Q9UPR0 1127 aa21.64■■□□□ 1.05
BRF1-216ENST00000550208 TMEM184BQ9Y519 407 aaPredicted RBP21.64■■□□□ 1.05
BRF1-216ENST00000550208 ACACAQ13085 2346 aa21.64■■□□□ 1.05
BRF1-216ENST00000550208 SPTBP11277 2137 aa21.64■■□□□ 1.05
BRF1-216ENST00000550208 TEX51A0A1B0GUA7 166 aa21.63■■□□□ 1.05
BRF1-216ENST00000550208 NCF1BA6NI72 391 aaPredicted RBP21.63■■□□□ 1.05
BRF1-216ENST00000550208 SRRM3A6NNA2 597 aaPredicted RBP21.63■■□□□ 1.05
BRF1-216ENST00000550208 NCF1CA8MVU1 366 aaPredicted RBP21.63■■□□□ 1.05
BRF1-216ENST00000550208 STMND1H3BQB6 276 aa21.63■■□□□ 1.05
BRF1-216ENST00000550208 CTSVO60911 334 aa21.63■■□□□ 1.05
BRF1-216ENST00000550208 KLHL2O95198 593 aa21.63■■□□□ 1.05
BRF1-216ENST00000550208 CCNDBP1O95273 360 aa21.63■■□□□ 1.05
BRF1-216ENST00000550208 NTRK1P04629 796 aa21.63■■□□□ 1.05
BRF1-216ENST00000550208 NCF1P14598 390 aaPredicted RBP21.63■■□□□ 1.05
BRF1-216ENST00000550208 NPPBP16860 134 aa21.63■■□□□ 1.05
BRF1-216ENST00000550208 CLN3Q13286 438 aa21.63■■□□□ 1.05
BRF1-216ENST00000550208 EMBQ6PCB8 327 aa21.63■■□□□ 1.05
BRF1-216ENST00000550208 PAQR7Q86WK9 346 aa21.63■■□□□ 1.05
BRF1-216ENST00000550208 STAG3L4Q8TBR4 150 aa21.63■■□□□ 1.05
BRF1-216ENST00000550208 N4BP2L2Q92802 583 aaPredicted RBP21.63■■□□□ 1.05
BRF1-216ENST00000550208 RHBDF1Q96CC6 855 aa21.63■■□□□ 1.05
BRF1-216ENST00000550208 GPR78Q96P69 363 aa21.63■■□□□ 1.05
BRF1-216ENST00000550208 PLCD4Q9BRC7 762 aa21.63■■□□□ 1.05
BRF1-216ENST00000550208 ULBP3Q9BZM4 244 aa21.63■■□□□ 1.05
BRF1-216ENST00000550208 PCBD2Q9H0N5 130 aa21.63■■□□□ 1.05
BRF1-216ENST00000550208 CUEDC1Q9NWM3 386 aaPredicted RBP21.63■■□□□ 1.05
BRF1-216ENST00000550208 EURLQ9NYK6 297 aa21.63■■□□□ 1.05
BRF1-216ENST00000550208 RNF112Q9ULX5 631 aa21.63■■□□□ 1.05
BRF1-216ENST00000550208 SNX7Q9UNH6 387 aa21.63■■□□□ 1.05
BRF1-216ENST00000550208 SH2B3Q9UQQ2 575 aa21.63■■□□□ 1.05
BRF1-216ENST00000550208 OR2A25A4D2G3 310 aa21.62■■□□□ 1.05
BRF1-216ENST00000550208 IQCJ-SCHIP1C9J366 451 aaPredicted RBP21.62■■□□□ 1.05
BRF1-216ENST00000550208 H7BY64 318 aa21.62■■□□□ 1.05
BRF1-216ENST00000550208 RRP8O43159 456 aaKnown RBP21.62■■□□□ 1.05
BRF1-216ENST00000550208 RAD1O60671 282 aa21.62■■□□□ 1.05
BRF1-216ENST00000550208 RFPL1O75677 317 aa21.62■■□□□ 1.05
BRF1-216ENST00000550208 DLGAP3O95886 979 aa21.62■■□□□ 1.05
BRF1-216ENST00000550208 LIPCP11150 499 aa21.62■■□□□ 1.05
BRF1-216ENST00000550208 CCND1P24385 295 aa21.62■■□□□ 1.05
BRF1-216ENST00000550208 GLRBP48167 497 aa21.62■■□□□ 1.05
BRF1-216ENST00000550208 FAM83EQ2M2I3 478 aa21.62■■□□□ 1.05
BRF1-216ENST00000550208 PTCHD3Q3KNS1 767 aa21.62■■□□□ 1.05
BRF1-216ENST00000550208 ZNF425Q6IV72 752 aa21.62■■□□□ 1.05
BRF1-216ENST00000550208 LCTLQ6UWM7 567 aa21.62■■□□□ 1.05
BRF1-216ENST00000550208 TIFABQ6ZNK6 161 aa21.62■■□□□ 1.05
BRF1-216ENST00000550208 CAVIN3Q969G5 261 aa21.62■■□□□ 1.05
BRF1-216ENST00000550208 NKD1Q969G9 470 aa21.62■■□□□ 1.05
BRF1-216ENST00000550208 PRAP1Q96NZ9 151 aa21.62■■□□□ 1.05
BRF1-216ENST00000550208 OR4K3Q96R72 315 aa21.62■■□□□ 1.05
BRF1-216ENST00000550208 ZNF358Q9NW07 568 aa21.62■■□□□ 1.05
BRF1-216ENST00000550208 WDR70Q9NW82 654 aa21.62■■□□□ 1.05
BRF1-216ENST00000550208 PSMC3IPQ9P2W1 217 aaPredicted RBP21.62■■□□□ 1.05
BRF1-216ENST00000550208 MAP1BP46821 2468 aaKnown RBP21.62■■□□□ 1.05
BRF1-216ENST00000550208 A0A0J9YVX5 310 aa21.61■■□□□ 1.05
BRF1-216ENST00000550208 IQANK1A0A1B0GTG1 560 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms