RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 ANKMY1Q9P2S6 941 aa16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 TAC3Q9UHF0 121 aa16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 SNX7Q9UNH6 387 aa16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 FARSAQ9Y285 508 aaKnown RBP16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 PADI2Q9Y2J8 665 aa16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 PSAT1Q9Y617 370 aa16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 OR2A25A4D2G3 310 aa16.53■□□□□ 0.24
CHMP1A-208ENST00000550102 CTSVO60911 334 aa16.53■□□□□ 0.24
CHMP1A-208ENST00000550102 CTSBP07858 339 aa16.53■□□□□ 0.24
CHMP1A-208ENST00000550102 FURINP09958 794 aa16.53■□□□□ 0.24
CHMP1A-208ENST00000550102 IL2P60568 153 aa16.53■□□□□ 0.24
CHMP1A-208ENST00000550102 ILF2Q12905 390 aaKnown RBP16.53■□□□□ 0.24
CHMP1A-208ENST00000550102 UGT8Q16880 541 aa16.53■□□□□ 0.24
CHMP1A-208ENST00000550102 TCTE1Q5JU00 501 aa16.53■□□□□ 0.24
CHMP1A-208ENST00000550102 ICE2Q659A1 982 aa16.53■□□□□ 0.24
CHMP1A-208ENST00000550102 ZNF385CQ66K41 422 aaPredicted RBP16.53■□□□□ 0.24
CHMP1A-208ENST00000550102 LCN10Q6JVE6 187 aa16.53■□□□□ 0.24
CHMP1A-208ENST00000550102 RNF44Q7L0R7 432 aa16.53■□□□□ 0.24
CHMP1A-208ENST00000550102 STRA8Q7Z7C7 330 aa16.53■□□□□ 0.24
CHMP1A-208ENST00000550102 ZC3HC1Q86WB0 502 aaKnown RBP16.53■□□□□ 0.24
CHMP1A-208ENST00000550102 MCOLN3Q8TDD5 553 aa16.53■□□□□ 0.24
CHMP1A-208ENST00000550102 DPH7Q9BTV6 452 aa16.53■□□□□ 0.24
CHMP1A-208ENST00000550102 MRPS30Q9NP92 439 aaKnown RBP16.53■□□□□ 0.24
CHMP1A-208ENST00000550102 GEMIN8Q9NWZ8 242 aaKnown RBP16.53■□□□□ 0.24
CHMP1A-208ENST00000550102 TUBD1Q9UJT1 453 aa16.53■□□□□ 0.24
CHMP1A-208ENST00000550102 MAN2B2Q9Y2E5 1009 aa16.53■□□□□ 0.24
CHMP1A-208ENST00000550102 HELZ2Q9BYK8 2649 aaKnown RBP16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 PABPN1LA6NDY0 278 aaKnown RBP16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 E7ENX8 843 aa16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 SLC16A5O15375 505 aa16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 IMPA1P29218 277 aa16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 ARSFP54793 590 aa16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 PLTPP55058 493 aa16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 TAP2Q03519 686 aa16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 KCNAB2Q13303 367 aa16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 IL10RAQ13651 578 aa16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 GRM7Q14831 915 aa16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 THEMIS2Q5TEJ8 643 aa16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 C1orf189Q5VU69 101 aa16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 CCDC25Q86WR0 208 aa16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 TTC29Q8NA56 475 aaPredicted RBP16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 PPFIBP2Q8ND30 876 aa16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 FBXO25Q8TCJ0 367 aa16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 ZNF592Q92610 1267 aa16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 ZNF285Q96NJ3 590 aa16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 GBP5Q96PP8 586 aa16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 OLFM1Q99784 485 aa16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 ZFYVE21Q9BQ24 234 aa16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 DHRS4Q9BTZ2 278 aa16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 PARVBQ9HBI1 364 aa16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 CCDC177Q9NQR7 707 aaPredicted RBP16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 UTP6Q9NYH9 597 aaKnown RBP16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 STOX2Q9P2F5 926 aaPredicted RBP16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 DHCR7Q9UBM7 475 aaKnown RBP16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 GPN3Q9UHW5 284 aaPredicted RBP16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 ADAMTS6Q9UKP5 1117 aa16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 TCFL5Q9UL49 500 aa16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 VWA7Q9Y334 891 aa16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 KCNMB2Q9Y691 235 aa16.52■□□□□ 0.24
CHMP1A-208ENST00000550102 FAM95CA0A1B0GW59 222 aa16.51■□□□□ 0.23
CHMP1A-208ENST00000550102 A0A1B0GX78 115 aa16.51■□□□□ 0.23
CHMP1A-208ENST00000550102 KIF2AO00139 706 aaPredicted RBP16.51■□□□□ 0.23
CHMP1A-208ENST00000550102 NRP2O60462 931 aa16.51■□□□□ 0.23
CHMP1A-208ENST00000550102 TSPAN12O95859 305 aa16.51■□□□□ 0.23
CHMP1A-208ENST00000550102 CAPN1P07384 714 aa16.51■□□□□ 0.23
CHMP1A-208ENST00000550102 GCGRP47871 477 aa16.51■□□□□ 0.23
CHMP1A-208ENST00000550102 TBPL1P62380 186 aa16.51■□□□□ 0.23
CHMP1A-208ENST00000550102 DCDP81605 110 aaKnown RBP16.51■□□□□ 0.23
CHMP1A-208ENST00000550102 PRDX1Q06830 199 aaKnown RBP16.51■□□□□ 0.23
CHMP1A-208ENST00000550102 YOD1Q5VVQ6 348 aaPredicted RBP16.51■□□□□ 0.23
CHMP1A-208ENST00000550102 THAP4Q8WY91 577 aa16.51■□□□□ 0.23
CHMP1A-208ENST00000550102 CDKL2Q92772 493 aa16.51■□□□□ 0.23
CHMP1A-208ENST00000550102 CCDC138Q96M89 665 aa16.51■□□□□ 0.23
CHMP1A-208ENST00000550102 PLCD4Q9BRC7 762 aa16.51■□□□□ 0.23
CHMP1A-208ENST00000550102 RHOJQ9H4E5 214 aa16.51■□□□□ 0.23
CHMP1A-208ENST00000550102 ENAMQ9NRM1 1142 aa16.51■□□□□ 0.23
CHMP1A-208ENST00000550102 ABCF3Q9NUQ8 709 aa16.51■□□□□ 0.23
CHMP1A-208ENST00000550102 IFT80Q9P2H3 777 aaPredicted RBP16.51■□□□□ 0.23
CHMP1A-208ENST00000550102 TXNDC16Q9P2K2 825 aa16.51■□□□□ 0.23
CHMP1A-208ENST00000550102 NDOR1Q9UHB4 597 aa16.51■□□□□ 0.23
CHMP1A-208ENST00000550102 PDE10AQ9Y233 779 aa16.51■□□□□ 0.23
CHMP1A-208ENST00000550102 IGKV1-8A0A0C4DH67 115 aa16.5■□□□□ 0.23
CHMP1A-208ENST00000550102 TCRBV9S1A1TA0A576 114 aa16.5■□□□□ 0.23
CHMP1A-208ENST00000550102 FITM1A5D6W6 292 aa16.5■□□□□ 0.23
CHMP1A-208ENST00000550102 DSCR3O14972 297 aa16.5■□□□□ 0.23
CHMP1A-208ENST00000550102 SRPX2O60687 465 aaPredicted RBP16.5■□□□□ 0.23
CHMP1A-208ENST00000550102 GSTA2P09210 222 aa16.5■□□□□ 0.23
CHMP1A-208ENST00000550102 EZRP15311 586 aaKnown RBP16.5■□□□□ 0.23
CHMP1A-208ENST00000550102 ZNF37AP17032 561 aaPredicted RBP16.5■□□□□ 0.23
CHMP1A-208ENST00000550102 SAT1P21673 171 aa16.5■□□□□ 0.23
CHMP1A-208ENST00000550102 SSTR1P30872 391 aa16.5■□□□□ 0.23
CHMP1A-208ENST00000550102 PMS2P54278 862 aa16.5■□□□□ 0.23
CHMP1A-208ENST00000550102 VSX2P58304 361 aaPredicted RBP16.5■□□□□ 0.23
CHMP1A-208ENST00000550102 YBX1P67809 324 aaKnown RBP16.5■□□□□ 0.23
CHMP1A-208ENST00000550102 ABATP80404 500 aa16.5■□□□□ 0.23
CHMP1A-208ENST00000550102 NFKB2Q00653 900 aa16.5■□□□□ 0.23
CHMP1A-208ENST00000550102 PHKG1Q16816 387 aa16.5■□□□□ 0.23
CHMP1A-208ENST00000550102 NKAIN1Q4KMZ8 207 aa16.5■□□□□ 0.23
CHMP1A-208ENST00000550102 PRAMEF13Q5VWM6 474 aa16.5■□□□□ 0.23
CHMP1A-208ENST00000550102 ZNF425Q6IV72 752 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms