RNA–Protein interactions for RNA: ENST00000548232.1

NR4A1-209, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best) BASIC

Gene NR4A1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-209ENST00000548232 SOX13Q9UN79 622 aa12.57□□□□□ -0.4
NR4A1-209ENST00000548232 CHMP2BQ9UQN3 213 aa12.57□□□□□ -0.4
NR4A1-209ENST00000548232 NTNG1Q9Y2I2 539 aa12.57□□□□□ -0.4
NR4A1-209ENST00000548232 TCAF1Q9Y4C2 921 aa12.57□□□□□ -0.4
NR4A1-209ENST00000548232 PCSK5Q92824 1860 aa12.57□□□□□ -0.4
NR4A1-209ENST00000548232 SPTBP11277 2137 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 CELSR2Q9HCU4 2923 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 SHANK1Q9Y566 2161 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 ZCWPW2A0A1B0GU75 182 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 CCDC162PA2VCL2 907 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 H7C0S8 307 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 AGPSO00116 658 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 KDM1AO60341 852 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 OR56A5P0C7T3 313 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 GRIA3P42263 894 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 ARL4CP56559 192 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 ACVR1Q04771 509 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 AIMP2Q13155 320 aaKnown RBP12.56□□□□□ -0.4
NR4A1-209ENST00000548232 KIR2DS3Q14952 304 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 UAP1Q16222 522 aaPredicted RBP12.56□□□□□ -0.4
NR4A1-209ENST00000548232 IRAK1BP1Q5VVH5 260 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 STEAP4Q687X5 459 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 MRPL14Q6P1L8 145 aaKnown RBP12.56□□□□□ -0.4
NR4A1-209ENST00000548232 Q6ZS92 163 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 RELL1Q8IUW5 271 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 PARP9Q8IXQ6 854 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 DNAAF3Q8N9W5 541 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 FBXO36Q8NEA4 188 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 OR5K2Q8NHB8 316 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 FLVCR1-AS1Q8TAF5 88 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 DNAJB14Q8TBM8 379 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 MFSD3Q96ES6 412 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 EBNA1BP2Q99848 306 aaKnown RBP12.56□□□□□ -0.4
NR4A1-209ENST00000548232 CDC42EP4Q9H3Q1 356 aaKnown RBP12.56□□□□□ -0.4
NR4A1-209ENST00000548232 SLC22A11Q9NSA0 550 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 NINJ2Q9NZG7 142 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 IL1RAPL1Q9NZN1 696 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 FBXL4Q9UKA2 621 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 PCDHGA10Q9Y5H3 936 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 MYO9AB2RTY4 2548 aa12.56□□□□□ -0.4
NR4A1-209ENST00000548232 UQCRHLA0A096LP55 91 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 SLC5A10A0PJK1 596 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 QSOX1O00391 747 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 EIF3HO15372 352 aaKnown RBP eCLIP12.55□□□□□ -0.4
NR4A1-209ENST00000548232 LRRTM2O43300 516 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 OR1I1O60431 355 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 UQCRHP07919 91 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 F7P08709 466 aaPredicted RBP12.55□□□□□ -0.4
NR4A1-209ENST00000548232 PIM1P11309 404 aaPredicted RBP12.55□□□□□ -0.4
NR4A1-209ENST00000548232 MAGP20916 626 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 NPY2RP49146 381 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 SOX8P57073 446 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 HSPA14Q0VDF9 509 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 ITIH4Q14624 930 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 SLC5A12Q1EHB4 618 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 CRB2Q5IJ48 1285 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 TSTD2Q5T7W7 516 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 AGAP7PQ5VUJ5 663 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 PRAMEF13Q5VWM6 474 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 TRMT10BQ6PF06 316 aaKnown RBP12.55□□□□□ -0.4
NR4A1-209ENST00000548232 OVCH1Q7RTY7 1134 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 TAX1BP1Q86VP1 789 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 CCDC25Q86WR0 208 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 SRRM1Q8IYB3 904 aaKnown RBP12.55□□□□□ -0.4
NR4A1-209ENST00000548232 ZBED8Q8IZ13 594 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.55□□□□□ -0.4
NR4A1-209ENST00000548232 DLG3Q92796 817 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 CNDP1Q96KN2 507 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 AGAP4Q96P64 663 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 TTC1Q99614 292 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 IL22Q9GZX6 179 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 CHRNA10Q9GZZ6 450 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 MRM3Q9HC36 420 aaKnown RBP12.55□□□□□ -0.4
NR4A1-209ENST00000548232 SLC6A20Q9NP91 592 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 SLC17A6Q9P2U8 582 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 OSGIN2Q9Y236 505 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 CSAG2Q9Y5P2 127 aa12.55□□□□□ -0.4
NR4A1-209ENST00000548232 ITPR2Q14571 2701 aa12.54□□□□□ -0.4
NR4A1-209ENST00000548232 FAM237BA0A1B0GVD1 139 aa12.54□□□□□ -0.4
NR4A1-209ENST00000548232 SDR42E2A6NKP2 422 aa12.54□□□□□ -0.4
NR4A1-209ENST00000548232 H2AFXP16104 143 aaPredicted RBP12.54□□□□□ -0.4
NR4A1-209ENST00000548232 MMP11P24347 488 aa12.54□□□□□ -0.4
NR4A1-209ENST00000548232 ADRA1DP25100 572 aa12.54□□□□□ -0.4
NR4A1-209ENST00000548232 PEBP1P30086 187 aaKnown RBP12.54□□□□□ -0.4
NR4A1-209ENST00000548232 SSTR1P30872 391 aa12.54□□□□□ -0.4
NR4A1-209ENST00000548232 MAGEA4P43358 317 aa12.54□□□□□ -0.4
NR4A1-209ENST00000548232 ARSFP54793 590 aa12.54□□□□□ -0.4
NR4A1-209ENST00000548232 PLOD1Q02809 727 aaPredicted RBP12.54□□□□□ -0.4
NR4A1-209ENST00000548232 CDC16Q13042 620 aa12.54□□□□□ -0.4
NR4A1-209ENST00000548232 CRYMQ14894 314 aa12.54□□□□□ -0.4
NR4A1-209ENST00000548232 SF1Q15637 639 aaKnown RBP12.54□□□□□ -0.4
NR4A1-209ENST00000548232 ANKRD20A4Q4UJ75 823 aa12.54□□□□□ -0.4
NR4A1-209ENST00000548232 DNAJC21Q5F1R6 531 aaKnown RBP12.54□□□□□ -0.4
NR4A1-209ENST00000548232 PCID2Q5JVF3 399 aa12.54□□□□□ -0.4
NR4A1-209ENST00000548232 CRYBG3Q68DQ2 2970 aa12.54□□□□□ -0.4
NR4A1-209ENST00000548232 CENPUQ71F23 418 aa12.54□□□□□ -0.4
NR4A1-209ENST00000548232 KCNMB4Q86W47 210 aa12.54□□□□□ -0.4
NR4A1-209ENST00000548232 PDIK1LQ8N165 341 aa12.54□□□□□ -0.4
NR4A1-209ENST00000548232 METTL27Q8N6F8 245 aaPredicted RBP12.54□□□□□ -0.4
NR4A1-209ENST00000548232 OR6P1Q8NGX9 317 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms