RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.31■□□□□ 0.52
MSLN-202ENST00000545450 ARIH1Q9Y4X5 557 aaPredicted RBP18.31■□□□□ 0.52
MSLN-202ENST00000545450 ORC6Q9Y5N6 252 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 EIF2S1P05198 315 aaKnown RBP18.31■□□□□ 0.52
MSLN-202ENST00000545450 PKMP14618 531 aaKnown RBP18.31■□□□□ 0.52
MSLN-202ENST00000545450 IL1RNP18510 177 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 PSMA3P25788 255 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 PBX2P40425 430 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 MAP2K4P45985 399 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 ERVK-21P61565 698 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 NPTX1Q15818 432 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 PLEKHG6Q3KR16 790 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 B3GNT8Q7Z7M8 397 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 TMEM25Q86YD3 366 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 LPCAT1Q8NF37 534 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 LMLNQ96KR4 655 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 TM6SF2Q9BZW4 377 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 PCDH12Q9NPG4 1184 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 SLC25A37Q9NYZ2 338 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 TRMT6Q9UJA5 497 aaKnown RBP18.31■□□□□ 0.52
MSLN-202ENST00000545450 CCL27Q9Y4X3 112 aa18.31■□□□□ 0.52
MSLN-202ENST00000545450 CEBPBP17676 345 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 ALDH4A1P30038 563 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 AKT1P31749 480 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 CDKN1CP49918 316 aaPredicted RBP18.3■□□□□ 0.52
MSLN-202ENST00000545450 CXCR4P61073 352 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 LSM3P62310 102 aaKnown RBP18.3■□□□□ 0.52
MSLN-202ENST00000545450 ABRAXAS2Q15018 415 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 TMEM236Q5W0B7 351 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 PRSS48Q7RTY5 328 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 SLC22A16Q86VW1 577 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 GALNT13Q8IUC8 556 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 MICU2Q8IYU8 434 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 MDGA1Q8NFP4 955 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 OR4K2Q8NGD2 314 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 RHOXF1Q8NHV9 184 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 CD200R1Q8TD46 325 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 SH3GL1Q99961 368 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 SLIRPQ9GZT3 109 aaKnown RBP18.3■□□□□ 0.52
MSLN-202ENST00000545450 TPRKBQ9Y3C4 175 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 NUP210Q8TEM1 1887 aaPredicted RBP18.3■□□□□ 0.52
MSLN-202ENST00000545450 OR7A17O14581 309 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 NIPSNAP2O75323 286 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 ZNF24P17028 368 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 HOXB6P17509 224 aaKnown RBP18.3■□□□□ 0.52
MSLN-202ENST00000545450 HLA-FP30511 346 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 PPP5CP53041 499 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 CDC20Q12834 499 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 PCBP2Q15366 365 aaKnown RBP eCLIP18.3■□□□□ 0.52
MSLN-202ENST00000545450 ZNF77Q15935 545 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 MAPKAPK3Q16644 382 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 RUNDC3AQ59EK9 446 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 LACC1Q8IV20 430 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 SETD9Q8NE22 299 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 OR4F6Q8NGB9 312 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 ZBTB18Q99592 522 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 CTRCQ99895 268 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 TBCDQ9BTW9 1192 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 ASPSCR1Q9BZE9 553 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 THG1LQ9NWX6 298 aaKnown RBP18.3■□□□□ 0.52
MSLN-202ENST00000545450 NUDT4Q9NZJ9 180 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 KLQ9UEF7 1012 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 VPS9D1Q9Y2B5 631 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 AP3M1Q9Y2T2 418 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 PCDHB14Q9Y5E9 798 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 HSPE1-MOB4S4R3N1 261 aa18.3■□□□□ 0.52
MSLN-202ENST00000545450 CREG1O75629 220 aa18.29■□□□□ 0.52
MSLN-202ENST00000545450 FTH1P02794 183 aa18.29■□□□□ 0.52
MSLN-202ENST00000545450 GSSP48637 474 aa18.29■□□□□ 0.52
MSLN-202ENST00000545450 MASP1P48740 699 aa18.29■□□□□ 0.52
MSLN-202ENST00000545450 HNRNPFP52597 415 aaKnown RBP18.29■□□□□ 0.52
MSLN-202ENST00000545450 CLCA4Q14CN2 919 aa18.29■□□□□ 0.52
MSLN-202ENST00000545450 PTPRRQ15256 657 aa18.29■□□□□ 0.52
MSLN-202ENST00000545450 CTSL3PQ5NE16 218 aa18.29■□□□□ 0.52
MSLN-202ENST00000545450 PDE12Q6L8Q7 609 aaKnown RBP18.29■□□□□ 0.52
MSLN-202ENST00000545450 RETSATQ6NUM9 610 aa18.29■□□□□ 0.52
MSLN-202ENST00000545450 CYP2U1Q7Z449 544 aa18.29■□□□□ 0.52
MSLN-202ENST00000545450 ARMC8Q8IUR7 673 aa18.29■□□□□ 0.52
MSLN-202ENST00000545450 PPP3R2Q96LZ3 170 aa18.29■□□□□ 0.52
MSLN-202ENST00000545450 SAMD11Q96NU1 681 aa18.29■□□□□ 0.52
MSLN-202ENST00000545450 LINC00597Q9H2U6 94 aa18.29■□□□□ 0.52
MSLN-202ENST00000545450 ABCB8Q9NUT2 735 aa18.29■□□□□ 0.52
MSLN-202ENST00000545450 ERVK-11Q9UQG0 969 aa18.29■□□□□ 0.52
MSLN-202ENST00000545450 INVSQ9Y283 1065 aa18.29■□□□□ 0.52
MSLN-202ENST00000545450 BMP1P13497 986 aa18.28■□□□□ 0.52
MSLN-202ENST00000545450 FMO3P31513 532 aa18.28■□□□□ 0.52
MSLN-202ENST00000545450 ARL1P40616 181 aaPredicted RBP18.28■□□□□ 0.52
MSLN-202ENST00000545450 CTSOP43234 321 aaPredicted RBP18.28■□□□□ 0.52
MSLN-202ENST00000545450 ST13P50502 369 aaKnown RBP18.28■□□□□ 0.52
MSLN-202ENST00000545450 NCS1P62166 190 aa18.28■□□□□ 0.52
MSLN-202ENST00000545450 TAF1AQ15573 450 aaPredicted RBP18.28■□□□□ 0.52
MSLN-202ENST00000545450 FAM174BQ3ZCQ3 159 aa18.28■□□□□ 0.52
MSLN-202ENST00000545450 ASTLQ6HA08 431 aaPredicted RBP18.28■□□□□ 0.52
MSLN-202ENST00000545450 GOLGA7Q7Z5G4 137 aa18.28■□□□□ 0.52
MSLN-202ENST00000545450 PIANPQ8IYJ0 282 aa18.28■□□□□ 0.52
MSLN-202ENST00000545450 CHCHD4Q8N4Q1 142 aa18.28■□□□□ 0.52
MSLN-202ENST00000545450 C12orf76Q8N812 135 aaPredicted RBP18.28■□□□□ 0.52
MSLN-202ENST00000545450 OR6K2Q8NGY2 324 aa18.28■□□□□ 0.52
MSLN-202ENST00000545450 ITCHQ96J02 903 aa18.28■□□□□ 0.52
MSLN-202ENST00000545450 KAT8Q9H7Z6 458 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms