RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	FAM187A	A6NFU0	413 aa		12.83	□□□□□ -0.36
POLE-222	ENST00000545015	SLC16A5	O15375	505 aa		12.83	□□□□□ -0.36
POLE-222	ENST00000545015	CNOT3	O75175	753 aa	Known RBP	12.83	□□□□□ -0.36
POLE-222	ENST00000545015	CCNDBP1	O95273	360 aa		12.83	□□□□□ -0.36
POLE-222	ENST00000545015	C8G	P07360	202 aa		12.83	□□□□□ -0.36
POLE-222	ENST00000545015	PIM1	P11309	404 aa	Predicted RBP	12.83	□□□□□ -0.36
POLE-222	ENST00000545015	CASR	P41180	1078 aa		12.83	□□□□□ -0.36
POLE-222	ENST00000545015	RGS4	P49798	205 aa		12.83	□□□□□ -0.36
POLE-222	ENST00000545015	SP140	Q13342	867 aa		12.83	□□□□□ -0.36
POLE-222	ENST00000545015	C1orf189	Q5VU69	101 aa		12.83	□□□□□ -0.36
POLE-222	ENST00000545015	FBXO42	Q6P3S6	717 aa		12.83	□□□□□ -0.36
POLE-222	ENST00000545015	MED25	Q71SY5	747 aa		12.83	□□□□□ -0.36
POLE-222	ENST00000545015	PIWIL4	Q7Z3Z4	852 aa	Known RBP	12.83	□□□□□ -0.36
POLE-222	ENST00000545015	RAB43	Q86YS6	212 aa		12.83	□□□□□ -0.36
POLE-222	ENST00000545015	TTC29	Q8NA56	475 aa	Predicted RBP	12.83	□□□□□ -0.36
POLE-222	ENST00000545015	BBOF1	Q8ND07	529 aa		12.83	□□□□□ -0.36
POLE-222	ENST00000545015	ZFYVE21	Q9BQ24	234 aa		12.83	□□□□□ -0.36
POLE-222	ENST00000545015	SELENOS	Q9BQE4	189 aa		12.83	□□□□□ -0.36
POLE-222	ENST00000545015	DPH7	Q9BTV6	452 aa		12.83	□□□□□ -0.36
POLE-222	ENST00000545015	TRIM55	Q9BYV6	548 aa		12.83	□□□□□ -0.36
POLE-222	ENST00000545015	ING2	Q9H160	280 aa		12.83	□□□□□ -0.36
POLE-222	ENST00000545015	WDR54	Q9H977	334 aa		12.83	□□□□□ -0.36
POLE-222	ENST00000545015	SLC6A20	Q9NP91	592 aa		12.83	□□□□□ -0.36
POLE-222	ENST00000545015	MRPS30	Q9NP92	439 aa	Known RBP	12.83	□□□□□ -0.36
POLE-222	ENST00000545015	CUTC	Q9NTM9	273 aa		12.83	□□□□□ -0.36
POLE-222	ENST00000545015	MOCS1	Q9NZB8	636 aa		12.83	□□□□□ -0.36
POLE-222	ENST00000545015	IFT80	Q9P2H3	777 aa	Predicted RBP	12.83	□□□□□ -0.36
POLE-222	ENST00000545015	NDOR1	Q9UHB4	597 aa		12.83	□□□□□ -0.36
POLE-222	ENST00000545015	TRMT6	Q9UJA5	497 aa	Known RBP	12.83	□□□□□ -0.36
POLE-222	ENST00000545015	TP53TG5	Q9Y2B4	290 aa		12.83	□□□□□ -0.36
POLE-222	ENST00000545015	FER1L5	A0AVI2	2057 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	EFCAB8	A8MWE9	144 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	TSPAN12	O95859	305 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	IGHE	P01854	428 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	HRH2	P25021	359 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	IMPA1	P29218	277 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	RPA3	P35244	121 aa	Predicted RBP	12.82	□□□□□ -0.36
POLE-222	ENST00000545015	RPL21	P46778	160 aa	Known RBP	12.82	□□□□□ -0.36
POLE-222	ENST00000545015	CARS	P49589	748 aa	Known RBP	12.82	□□□□□ -0.36
POLE-222	ENST00000545015	RRAD	P55042	308 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	CDKN2D	P55273	166 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	ETF1	P62495	437 aa	Known RBP	12.82	□□□□□ -0.36
POLE-222	ENST00000545015	ILF2	Q12905	390 aa	Known RBP	12.82	□□□□□ -0.36
POLE-222	ENST00000545015	KLRB1	Q12918	225 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	PRTG	Q2VWP7	1150 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	WASHC2D	Q5SRD0	308 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	RBM20	Q5T481	1227 aa	Known RBP	12.82	□□□□□ -0.36
POLE-222	ENST00000545015	MLIP	Q5VWP3	458 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	ICE2	Q659A1	982 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	CPZ	Q66K79	652 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	FRMPD2B	Q6IN97	320 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	TRMT10B	Q6PF06	316 aa	Known RBP	12.82	□□□□□ -0.36
POLE-222	ENST00000545015	SUSD1	Q6UWL2	747 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	TTLL10	Q6ZVT0	673 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	UBE2R2	Q712K3	238 aa	Predicted RBP	12.82	□□□□□ -0.36
POLE-222	ENST00000545015	OVCH1	Q7RTY7	1134 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	PRICKLE2	Q7Z3G6	844 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	MAATS1	Q7Z4T9	603 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	MRGPRE	Q86SM8	312 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	SPATA4	Q8NEY3	305 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	EEF1AKMT1	Q8WVE0	214 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	PTER	Q96BW5	349 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	PDLIM5	Q96HC4	596 aa	Known RBP	12.82	□□□□□ -0.36
POLE-222	ENST00000545015	CCDC138	Q96M89	665 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	PWWP2A	Q96N64	755 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	KRT12	Q99456	494 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	NDN	Q99608	321 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	ERP44	Q9BS26	406 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	ZNF71	Q9NQZ8	489 aa	Predicted RBP	12.82	□□□□□ -0.36
POLE-222	ENST00000545015	IRAK4	Q9NWZ3	460 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	UTP6	Q9NYH9	597 aa	Known RBP	12.82	□□□□□ -0.36
POLE-222	ENST00000545015	GPN3	Q9UHW5	284 aa	Predicted RBP	12.82	□□□□□ -0.36
POLE-222	ENST00000545015	TSR3	Q9UJK0	312 aa	Known RBP	12.82	□□□□□ -0.36
POLE-222	ENST00000545015	CHMP2B	Q9UQN3	213 aa		12.82	□□□□□ -0.36
POLE-222	ENST00000545015	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
POLE-222	ENST00000545015	LOC105369274	A0A096LPK9	316 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	LOC102723532	A0A0G2JNH3	316 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	ARGFX	A6NJG6	315 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015		K7EM74	188 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	DNAJB5	O75953	348 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	UMOD	P07911	640 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	EZR	P15311	586 aa	Known RBP	12.81	□□□□□ -0.36
POLE-222	ENST00000545015	FDXR	P22570	491 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	MCM3	P25205	808 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	FOLR3	P41439	243 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	SOX8	P57073	446 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	VSX2	P58304	361 aa	Predicted RBP	12.81	□□□□□ -0.36
POLE-222	ENST00000545015	YBX1	P67809	324 aa	Known RBP	12.81	□□□□□ -0.36
POLE-222	ENST00000545015	MGAT5	Q09328	741 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	FAM69B	Q5VUD6	431 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	FAM45BP	Q6NSW5	357 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	PRMT9	Q6P2P2	845 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	PAQR3	Q6TCH7	311 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	CYS1	Q717R9	158 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	COX15	Q7KZN9	410 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	ZNF572	Q7Z3I7	529 aa	Predicted RBP	12.81	□□□□□ -0.36
POLE-222	ENST00000545015	SLC26A11	Q86WA9	606 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	PTRH1	Q86Y79	214 aa	Known RBP	12.81	□□□□□ -0.36
POLE-222	ENST00000545015	HPS6	Q86YV9	775 aa		12.81	□□□□□ -0.36
POLE-222	ENST00000545015	OR4N4	Q8N0Y3	316 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms