RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 C1orf109Q9NX04 203 aa13.23□□□□□ -0.29
HCFC2-202ENST00000544223 SCHIP1Q9P0W5 487 aaPredicted RBP13.23□□□□□ -0.29
HCFC2-202ENST00000544223 STX18Q9P2W9 335 aaKnown RBP13.23□□□□□ -0.29
HCFC2-202ENST00000544223 FEZF1A0PJY2 475 aa13.23□□□□□ -0.29
HCFC2-202ENST00000544223 JUPP14923 745 aa13.23□□□□□ -0.29
HCFC2-202ENST00000544223 METRNLQ641Q3 311 aa13.23□□□□□ -0.29
HCFC2-202ENST00000544223 C8orf82Q6P1X6 216 aaPredicted RBP13.23□□□□□ -0.29
HCFC2-202ENST00000544223 LRRC74BQ6ZQY2 392 aa13.23□□□□□ -0.29
HCFC2-202ENST00000544223 PDZD3Q86UT5 571 aa13.23□□□□□ -0.29
HCFC2-202ENST00000544223 ZFAND4Q86XD8 727 aa13.23□□□□□ -0.29
HCFC2-202ENST00000544223 TCAIMQ8N3R3 496 aa13.23□□□□□ -0.29
HCFC2-202ENST00000544223 OR56A3Q8NH54 315 aa13.23□□□□□ -0.29
HCFC2-202ENST00000544223 HUS1BQ8NHY5 278 aa13.23□□□□□ -0.29
HCFC2-202ENST00000544223 C12orf66Q96MD2 445 aa13.23□□□□□ -0.29
HCFC2-202ENST00000544223 TPSD1Q9BZJ3 242 aa13.23□□□□□ -0.29
HCFC2-202ENST00000544223 TMEM181Q9P2C4 612 aa13.23□□□□□ -0.29
HCFC2-202ENST00000544223 SNX6Q9UNH7 406 aa13.23□□□□□ -0.29
HCFC2-202ENST00000544223 ABCA7Q8IZY2 2146 aa13.23□□□□□ -0.29
HCFC2-202ENST00000544223 TGFB1P01137 390 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 CDH1P12830 882 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 SDC1P18827 310 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 PNLIPRP1P54315 467 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 CYP4F2P78329 520 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 PGS1Q32NB8 556 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 PDCD4Q53EL6 469 aaKnown RBP13.22□□□□□ -0.29
HCFC2-202ENST00000544223 USP39Q53GS9 565 aaKnown RBP13.22□□□□□ -0.29
HCFC2-202ENST00000544223 KBTBD6Q86V97 674 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 OR7G3Q8NG95 312 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 LINC00615Q96LM1 132 aaPredicted RBP13.22□□□□□ -0.29
HCFC2-202ENST00000544223 PPP3R2Q96LZ3 170 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 MACROD1Q9BQ69 325 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 GPATCH1Q9BRR8 931 aaKnown RBP13.22□□□□□ -0.29
HCFC2-202ENST00000544223 APOOQ9BUR5 198 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 IKZF5Q9H5V7 419 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 CARS2Q9HA77 564 aaKnown RBP13.22□□□□□ -0.29
HCFC2-202ENST00000544223 TAC3Q9UHF0 121 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 PPT2Q9UMR5 302 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 PRPF19Q9UMS4 504 aaKnown RBP13.22□□□□□ -0.29
HCFC2-202ENST00000544223 CYP8B1Q9UNU6 501 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 KLHL20Q9Y2M5 609 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 SLC28A1O00337 649 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 DFNA5O60443 496 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 HOXB3P14651 431 aaPredicted RBP13.22□□□□□ -0.29
HCFC2-202ENST00000544223 IL9P15248 144 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 DRD1P21728 446 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 NAA20P61599 178 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 RPS13P62277 151 aaKnown RBP13.22□□□□□ -0.29
HCFC2-202ENST00000544223 SLBPQ14493 270 aaKnown RBP eCLIP13.22□□□□□ -0.29
HCFC2-202ENST00000544223 ENPP7Q6UWV6 458 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 SLCO4C1Q6ZQN7 724 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 LRRC56Q8IYG6 542 aaPredicted RBP13.22□□□□□ -0.29
HCFC2-202ENST00000544223 C10orf111Q8N326 155 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 WDR20Q8TBZ3 569 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 ZNF514Q96K75 400 aaPredicted RBP13.22□□□□□ -0.29
HCFC2-202ENST00000544223 ZNF570Q96NI8 536 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 FERD3LQ96RJ6 166 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 GAS2L1Q99501 681 aaPredicted RBP13.22□□□□□ -0.29
HCFC2-202ENST00000544223 SERPINI1Q99574 410 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 DPY30Q9C005 99 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 OR51B5Q9H339 312 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 C6orf106Q9H6K1 298 aaPredicted RBP13.22□□□□□ -0.29
HCFC2-202ENST00000544223 COPS7BQ9H9Q2 264 aaPredicted RBP13.22□□□□□ -0.29
HCFC2-202ENST00000544223 CD300AQ9UGN4 299 aa13.22□□□□□ -0.29
HCFC2-202ENST00000544223 KANSL1LA0AUZ9 987 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 FAM234BA2RU67 622 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 PDZK1P1A8MUH7 402 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 TRIM38O00635 465 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 MYCLP1P12525 358 aaPredicted RBP13.21□□□□□ -0.29
HCFC2-202ENST00000544223 ATP6V1B2P21281 511 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 PEX2P28328 305 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 AP2B1P63010 937 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 GAS6Q14393 721 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 NANOGP8Q6NSW7 305 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 SPPL2CQ8IUH8 684 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 LILRA2Q8N149 483 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 CLEC4FQ8N1N0 589 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 LINC01555Q8NAE3 123 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 PCYOX1LQ8NBM8 494 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 OR7A2PQ8NGA2 310 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 HHIPQ96QV1 700 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 UHRF1Q96T88 793 aaPredicted RBP13.21□□□□□ -0.29
HCFC2-202ENST00000544223 INPP5KQ9BT40 448 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 SEMA6AQ9H2E6 1030 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 NANOGQ9H9S0 305 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 PHPT1Q9NRX4 125 aaPredicted RBP13.21□□□□□ -0.29
HCFC2-202ENST00000544223 GEMIN8Q9NWZ8 242 aaKnown RBP13.21□□□□□ -0.29
HCFC2-202ENST00000544223 VAPAQ9P0L0 249 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 EIF3LQ9Y262 564 aaKnown RBP13.21□□□□□ -0.29
HCFC2-202ENST00000544223 C15orf41Q9Y2V0 281 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 C17orf113A0A1B0GUU1 675 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 MT-ND1P03886 318 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 SLC35G4P0C7Q5 338 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 TRIM25Q14258 630 aaKnown RBP13.21□□□□□ -0.29
HCFC2-202ENST00000544223 CDKL4Q5MAI5 379 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 CAPN13Q6MZZ7 669 aaPredicted RBP13.21□□□□□ -0.29
HCFC2-202ENST00000544223 SLC30A9Q6PML9 568 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 DLEU7Q6UYE1 221 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 DHDDSQ86SQ9 333 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 PHACTR4Q8IZ21 702 aa13.21□□□□□ -0.29
HCFC2-202ENST00000544223 OR1E3Q8WZA6 343 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms