RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 GRAMD4Q6IC98 578 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 SHQ1Q6PI26 577 aaKnown RBP5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 DCDC5Q6ZRR9 648 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 ZNF551Q7Z340 670 aaPredicted RBP5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 GPR155Q7Z3F1 870 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 TMEM150AQ86TG1 271 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 ANKRD13BQ86YJ7 626 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 HIPK1Q86Z02 1210 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 RASGRP3Q8IV61 690 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 RBM12BQ8IXT5 1001 aaKnown RBP5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 HS3ST5Q8IZT8 346 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 FAM9CQ8IZT9 166 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 EID3Q8N140 333 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 NXPE1Q8N323 547 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 ELMOD1Q8N336 334 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 CPA6Q8N4T0 437 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 SLC15A4Q8N697 577 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 BEND7Q8N7W2 519 aaPredicted RBP5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 L3MBTL4Q8NA19 623 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 HJURPQ8NCD3 748 aaPredicted RBP5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 DDHD1Q8NEL9 900 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 DBF4BQ8NFT6 615 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 WFDC5Q8TCV5 224 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 NETO1Q8TDF5 533 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 ABTB1Q969K4 478 aaPredicted RBP5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 ITFG2Q969R8 447 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 FAM162AQ96A26 154 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 PYURFQ96I23 114 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 REXO5Q96IC2 774 aaKnown RBP5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 ITCHQ96J02 903 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 OR52E6Q96RD3 313 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 CLSTN3Q9BQT9 956 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 VN1R3Q9BXE9 311 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 MRPL9Q9BYD2 267 aaKnown RBP5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 LTB4R2Q9NPC1 389 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 PAK1IP1Q9NWT1 392 aaPredicted RBP5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 KCTD5Q9NXV2 234 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 VNN3Q9NY84 501 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 ENPP5Q9UJA9 477 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 C3orf18Q9UK00 162 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 BLOC1S6Q9UL45 172 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 ERVW-1Q9UQF0 538 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 INVSQ9Y283 1065 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 DLGAP4Q9Y2H0 992 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 PPIL1Q9Y3C6 166 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 ANGPTL3Q9Y5C1 460 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 PCDHB14Q9Y5E9 798 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 CORINQ9Y5Q5 1042 aa5.06□□□□□ -1.6
ATPAF1-212ENST00000542495 ANKRD12Q6UB98 2062 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 IGLV3-16A0A075B6K0 115 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 C1orf232A0A0U1RR37 186 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 CXorf51AA0A1B0GTR3 108 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 A0A1W2PQ45 241 aaPredicted RBP5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 A0A1W2PQY0 241 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 H0Y626 953 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 PER2O15055 1255 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 ZSCAN9O15535 394 aaPredicted RBP5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 SMAD6O43541 496 aaKnown RBP5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 UGT2B11O75310 529 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 GABARAPO95166 117 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 TRIM16O95361 564 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 CLDN7O95471 211 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 ZBTB11O95625 1053 aaPredicted RBP5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 OLFM2O95897 454 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 SERPINA1P01009 418 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 PDYNP01213 254 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 ANXA5P08758 320 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 TFPTP0C1Z6 253 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 IRF1P10914 325 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 BMP1P13497 986 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 PFKLP17858 780 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 RPL17P18621 184 aaKnown RBP5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 AGXTP21549 392 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 HTR1BP28222 390 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 HOXD10P28358 340 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 CD6P30203 668 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 S100A3P33764 101 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 SPAM1P38567 509 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 NSG1P42857 185 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 SLC6A12P48065 614 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 CD97P48960 835 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 RAD23AP54725 363 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 C21orf58P58505 322 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 CXCR4P61073 352 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 BCL2L1Q07817 233 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 CDK5R2Q13319 367 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 KEAP1Q14145 624 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 SPCS2Q15005 226 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 IMPG1Q17R60 797 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 TPGS2Q68CL5 300 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 CAPN13Q6MZZ7 669 aaPredicted RBP5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 SPESP1Q6UW49 350 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 GCNT7Q6ZNI0 430 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 TPGS1Q6ZTW0 290 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 LRRC70Q7Z2Q7 622 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 SERPINA11Q86U17 422 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 JAZF1Q86VZ6 243 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 CYP4Z1Q86W10 505 aa5.05□□□□□ -1.6
ATPAF1-212ENST00000542495 ZSWIM9Q86XI8 627 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms