RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 KRT6BP04259 564 aa13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 MTHFD1P11586 935 aaKnown RBP13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 GNAZP19086 355 aa13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 AK4P27144 223 aaPredicted RBP13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 NDUFS1P28331 727 aa13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 CD38P28907 300 aa13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 PRDX6P30041 224 aa13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 ACTR1BP42025 376 aa13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 KRT6CP48668 564 aa13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 BLKP51451 505 aa13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 ACTR1AP61163 376 aa13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 RACK1P63244 317 aaKnown RBP13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 IRF8Q02556 426 aa13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 ZNF33BQ06732 778 aa13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 ILF3Q12906 894 aaKnown RBP eCLIP13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 KLF10Q13118 480 aa13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 PRKG2Q13237 762 aa13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 FASTKQ14296 549 aaKnown RBP13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 SQLEQ14534 574 aa13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 PRAMEF9Q5VWM5 478 aa13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 LCTLQ6UWM7 567 aa13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 PARGQ86W56 976 aa13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 NRROSQ86YC3 692 aa13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 GPBAR1Q8TDU6 330 aa13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 GSDMCQ9BYG8 508 aa13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 EHD1Q9H4M9 534 aa13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 IMP3Q9NV31 184 aaKnown RBP13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 SCHIP1Q9P0W5 487 aaPredicted RBP13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 TBC1D29Q9UFV1 150 aa13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 SNX6Q9UNH7 406 aa13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 DYRK1BQ9Y463 629 aa13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 COPG1Q9Y678 874 aaKnown RBP13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 SLCO1B1Q9Y6L6 691 aa13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 COLEC10Q9Y6Z7 277 aa13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 TP53BP1Q12888 1972 aaPredicted RBP13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 USP24Q9UPU5 2620 aa13.78□□□□□ -0.2
CYB561A3-216ENST00000540755 SERTM1A2A2V5 107 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 A6NCN8 305 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 OR52A4PA6NMU1 304 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 SLC28A1O00337 649 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 KDM1AO60341 852 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 EPN2O95208 641 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 ESRRAP11474 423 aaPredicted RBP13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 NPPBP16860 134 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 HNF4AP41235 474 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 NAA25Q14CX7 972 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 ABRAXAS2Q15018 415 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 CPSF6Q16630 551 aaKnown RBP eCLIP13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 XKR6Q5GH73 641 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 PRAMEF14Q5SWL7 426 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 PRAMEF13Q5VWM6 474 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 GRHL2Q6ISB3 625 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 Q6ZSR9 355 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 TRIM46Q7Z4K8 759 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 SPATA19Q7Z5L4 167 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 MYLK4Q86YV6 388 aaPredicted RBP13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 DEFB119Q8N690 84 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 OR2T11Q8NH01 316 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 CCL4L1Q8NHW4 92 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 HMGCLL1Q8TB92 370 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 SMPDL3AQ92484 453 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 CMTM5Q96DZ9 223 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 WDR34Q96EX3 536 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 HSPA12BQ96MM6 686 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 CAMK1GQ96NX5 476 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 IL17FQ96PD4 163 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 RAB3IPQ96QF0 476 aaPredicted RBP13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 HAUS8Q9BT25 410 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 PCBD2Q9H0N5 130 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 DUSP15Q9H1R2 295 aaPredicted RBP13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 KIR3DX1Q9H7L2 352 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 RXFP3Q9NSD7 469 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 PLAGL1Q9UM63 463 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 CCL27Q9Y4X3 112 aa13.77□□□□□ -0.21
CYB561A3-216ENST00000540755 H0YIV9 168 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 FFAR3O14843 346 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 GPR42O15529 346 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 MAP3K13O43283 966 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 RGS14O43566 566 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 WNT1P04628 370 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 F3P13726 295 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 CD22P20273 847 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 BCKDHBP21953 392 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 PIK3R1P27986 724 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 PKLRP30613 574 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 MRPL19P49406 292 aaKnown RBP13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 RAB28P51157 221 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 DOC2AQ14183 400 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 KRT33BQ14525 404 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 SF3A2Q15428 464 aaKnown RBP13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 ZRSR2Q15696 482 aaKnown RBP13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 CCDC6Q16204 474 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 GSTA3Q16772 222 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 SMU1Q2TAY7 513 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 ATP6AP1LQ52LC2 224 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 SLC30A9Q6PML9 568 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 SCIMPQ6UWF3 145 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 SLCO4C1Q6ZQN7 724 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 ASRGL1Q7L266 308 aa13.76□□□□□ -0.21
CYB561A3-216ENST00000540755 PHACTR4Q8IZ21 702 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms