RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 SH3BGRLO75368 114 aa21.71■■□□□ 1.07
HOMER3-204ENST00000539827 SLC35G4P0C7Q5 338 aa21.71■■□□□ 1.07
HOMER3-204ENST00000539827 GLULP15104 373 aa21.71■■□□□ 1.07
HOMER3-204ENST00000539827 AMD1P17707 334 aa21.71■■□□□ 1.07
HOMER3-204ENST00000539827 GABRG2P18507 467 aa21.71■■□□□ 1.07
HOMER3-204ENST00000539827 SLC6A2P23975 617 aa21.71■■□□□ 1.07
HOMER3-204ENST00000539827 PLIN5Q00G26 463 aa21.71■■□□□ 1.07
HOMER3-204ENST00000539827 TRIM25Q14258 630 aaKnown RBP21.71■■□□□ 1.07
HOMER3-204ENST00000539827 THEMIS2Q5TEJ8 643 aa21.71■■□□□ 1.07
HOMER3-204ENST00000539827 CCDC177Q9NQR7 707 aaPredicted RBP21.71■■□□□ 1.07
HOMER3-204ENST00000539827 C15orf41Q9Y2V0 281 aa21.71■■□□□ 1.07
HOMER3-204ENST00000539827 TRIOBPQ9H2D6 2365 aa21.71■■□□□ 1.07
HOMER3-204ENST00000539827 POM121BA6NF01 834 aa21.7■■□□□ 1.07
HOMER3-204ENST00000539827 GCKP35557 465 aa21.7■■□□□ 1.07
HOMER3-204ENST00000539827 TPMTP51580 245 aa21.7■■□□□ 1.07
HOMER3-204ENST00000539827 CSTF3Q12996 717 aaKnown RBP21.7■■□□□ 1.07
HOMER3-204ENST00000539827 RNF111Q6ZNA4 994 aa21.7■■□□□ 1.07
HOMER3-204ENST00000539827 GALNT13Q8IUC8 556 aa21.7■■□□□ 1.07
HOMER3-204ENST00000539827 HMGB4Q8WW32 186 aa21.7■■□□□ 1.07
HOMER3-204ENST00000539827 ASB9Q96DX5 294 aa21.7■■□□□ 1.07
HOMER3-204ENST00000539827 ACSL5Q9ULC5 683 aa21.7■■□□□ 1.07
HOMER3-204ENST00000539827 DYTNA2CJ06 578 aa21.7■■□□□ 1.06
HOMER3-204ENST00000539827 DNAJA2O60884 412 aa21.7■■□□□ 1.06
HOMER3-204ENST00000539827 TACR1P25103 407 aa21.7■■□□□ 1.06
HOMER3-204ENST00000539827 MRPS22P82650 360 aaKnown RBP21.7■■□□□ 1.06
HOMER3-204ENST00000539827 FOXM1Q08050 763 aa21.7■■□□□ 1.06
HOMER3-204ENST00000539827 PYCR3Q53H96 274 aa21.7■■□□□ 1.06
HOMER3-204ENST00000539827 OR7G3Q8NG95 312 aa21.7■■□□□ 1.06
HOMER3-204ENST00000539827 OR5K2Q8NHB8 316 aa21.7■■□□□ 1.06
HOMER3-204ENST00000539827 TSSK3Q96PN8 268 aa21.7■■□□□ 1.06
HOMER3-204ENST00000539827 INSM2Q96T92 566 aaPredicted RBP21.7■■□□□ 1.06
HOMER3-204ENST00000539827 BTBD1Q9H0C5 482 aa21.7■■□□□ 1.06
HOMER3-204ENST00000539827 ABCD2Q9UBJ2 740 aa21.7■■□□□ 1.06
HOMER3-204ENST00000539827 BCAP29Q9UHQ4 241 aa21.7■■□□□ 1.06
HOMER3-204ENST00000539827 COLQQ9Y215 455 aaPredicted RBP21.7■■□□□ 1.06
HOMER3-204ENST00000539827 PCDHA9Q9Y5H5 950 aa21.7■■□□□ 1.06
HOMER3-204ENST00000539827 H3BNX3 289 aa21.69■■□□□ 1.06
HOMER3-204ENST00000539827 C1GALT1C1LP0DN25 315 aa21.69■■□□□ 1.06
HOMER3-204ENST00000539827 PRPS2P11908 318 aa21.69■■□□□ 1.06
HOMER3-204ENST00000539827 VHLP40337 213 aa21.69■■□□□ 1.06
HOMER3-204ENST00000539827 DMPKQ09013 629 aa21.69■■□□□ 1.06
HOMER3-204ENST00000539827 SFSWAPQ12872 951 aaKnown RBP21.69■■□□□ 1.06
HOMER3-204ENST00000539827 SLBPQ14493 270 aaKnown RBP eCLIP21.69■■□□□ 1.06
HOMER3-204ENST00000539827 FAM174BQ3ZCQ3 159 aa21.69■■□□□ 1.06
HOMER3-204ENST00000539827 CAPRIN2Q6IMN6 1127 aaKnown RBP21.69■■□□□ 1.06
HOMER3-204ENST00000539827 Q6ZS52 159 aa21.69■■□□□ 1.06
HOMER3-204ENST00000539827 DHDDSQ86SQ9 333 aa21.69■■□□□ 1.06
HOMER3-204ENST00000539827 SPATA24Q86W54 205 aa21.69■■□□□ 1.06
HOMER3-204ENST00000539827 SLC5A11Q8WWX8 675 aa21.69■■□□□ 1.06
HOMER3-204ENST00000539827 ASB12Q8WXK4 309 aa21.69■■□□□ 1.06
HOMER3-204ENST00000539827 TMEM125Q96AQ2 219 aa21.69■■□□□ 1.06
HOMER3-204ENST00000539827 C12orf66Q96MD2 445 aa21.69■■□□□ 1.06
HOMER3-204ENST00000539827 FERD3LQ96RJ6 166 aa21.69■■□□□ 1.06
HOMER3-204ENST00000539827 TIMM29Q9BSF4 260 aa21.69■■□□□ 1.06
HOMER3-204ENST00000539827 EBPLQ9BY08 206 aa21.69■■□□□ 1.06
HOMER3-204ENST00000539827 TRIT1Q9H3H1 467 aaKnown RBP21.69■■□□□ 1.06
HOMER3-204ENST00000539827 RMI1Q9H9A7 625 aa21.69■■□□□ 1.06
HOMER3-204ENST00000539827 PCDHGA11Q9Y5H2 935 aa21.69■■□□□ 1.06
HOMER3-204ENST00000539827 MAGEB17A8MXT2 336 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 NPIPB8E9PQR5 432 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 PI15O43692 258 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 SDC1P18827 310 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 MEF2AQ02078 507 aaPredicted RBP21.68■■□□□ 1.06
HOMER3-204ENST00000539827 SF1Q15637 639 aaKnown RBP21.68■■□□□ 1.06
HOMER3-204ENST00000539827 RABL3Q5HYI8 236 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 SPANXN4Q5MJ08 99 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 PRAMEF14Q5SWL7 426 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 PRAMEF13Q5VWM6 474 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 MED27Q6P2C8 311 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 PGBD3Q8N328 593 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 CLMPQ9H6B4 373 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 FGF22Q9HCT0 170 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 SPATA6Q9NWH7 488 aaPredicted RBP21.68■■□□□ 1.06
HOMER3-204ENST00000539827 VPS29Q9UBQ0 182 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 H0Y8X5 98 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 ETHE1O95571 254 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 RPN2P04844 631 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 MAPK1P28482 360 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 ZNF33BQ06732 778 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 E2F2Q14209 437 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 C6orf10Q5SRN2 563 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 ATG9BQ674R7 924 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 NOXRED1Q6NXP6 359 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 NXPE4Q6UWF7 544 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 DPP10Q8N608 796 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 HUS1BQ8NHY5 278 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 SETD7Q8WTS6 366 aaKnown RBP21.68■■□□□ 1.06
HOMER3-204ENST00000539827 TMEM74Q96NL1 305 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 ACAT2Q9BWD1 397 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 SPNS1Q9H2V7 528 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 GEMIN8Q9NWZ8 242 aaKnown RBP21.68■■□□□ 1.06
HOMER3-204ENST00000539827 EBF1Q9UH73 591 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 TMED5Q9Y3A6 229 aa21.68■■□□□ 1.06
HOMER3-204ENST00000539827 KLHL33A6NCF5 533 aa21.67■■□□□ 1.06
HOMER3-204ENST00000539827 LRATO95237 230 aa21.67■■□□□ 1.06
HOMER3-204ENST00000539827 C7P10643 843 aa21.67■■□□□ 1.06
HOMER3-204ENST00000539827 SRFP11831 508 aa21.67■■□□□ 1.06
HOMER3-204ENST00000539827 CLDN8P56748 225 aa21.67■■□□□ 1.06
HOMER3-204ENST00000539827 TRAP1Q12931 704 aaKnown RBP21.67■■□□□ 1.06
HOMER3-204ENST00000539827 KIAA2013Q8IYS2 634 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 506.5 ms