RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 PFN3P60673 137 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 MAD2L1Q13257 205 aaPredicted RBP13.65□□□□□ -0.22
UBE3B-210ENST00000539599 CPZQ66K79 652 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 PDE12Q6L8Q7 609 aaKnown RBP13.65□□□□□ -0.22
UBE3B-210ENST00000539599 C16orf87Q6PH81 154 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 LSRQ86X29 649 aaPredicted RBP13.65□□□□□ -0.22
UBE3B-210ENST00000539599 SYT12Q8IV01 421 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 TMEM132CQ8N3T6 1108 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 UBTD2Q8WUN7 234 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 KCNH6Q9H252 994 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 LINC00597Q9H2U6 94 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 BAG5Q9UL15 447 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 ITM2BQ9Y287 266 aa13.65□□□□□ -0.22
UBE3B-210ENST00000539599 OBSL1O75147 1896 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 MICAL3Q7RTP6 2002 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.64□□□□□ -0.23
UBE3B-210ENST00000539599 GRXCR2A6NFK2 248 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 C16orf96A6NNT2 1141 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 FPGTO14772 594 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 CCL16O15467 120 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 NOL3O60936 208 aaKnown RBP13.64□□□□□ -0.23
UBE3B-210ENST00000539599 BCAS1O75363 584 aaPredicted RBP13.64□□□□□ -0.23
UBE3B-210ENST00000539599 BCL10O95999 233 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 IGFBP5P24593 272 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 CRTC3Q6UUV7 619 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 TRIM74Q86UV6 250 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 SLC39A11Q8N1S5 342 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 ZCCHC7Q8N3Z6 543 aaKnown RBP13.64□□□□□ -0.23
UBE3B-210ENST00000539599 GLB1L3Q8NCI6 653 aaPredicted RBP13.64□□□□□ -0.23
UBE3B-210ENST00000539599 ZNF420Q8TAQ5 688 aaPredicted RBP13.64□□□□□ -0.23
UBE3B-210ENST00000539599 ASB11Q8WXH4 323 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 FKBP10Q96AY3 582 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 AMBNQ9NP70 447 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 COL4A6Q14031 1691 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 A0A096LPI6 279 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 FAM220BPB1ANY3 271 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 CLIC1O00299 241 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 FKBP9O95302 570 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 ALDH1A1P00352 501 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 HIST1H2AGP0C0S8 130 aaPredicted RBP13.64□□□□□ -0.23
UBE3B-210ENST00000539599 HIST1H2ADP20671 130 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 METAP1P53582 386 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 CTSCP53634 463 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 WNT3P56703 355 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 EMX1Q04741 257 aaPredicted RBP13.64□□□□□ -0.23
UBE3B-210ENST00000539599 CD300CQ08708 224 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 CDK5R2Q13319 367 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 GBX1Q14549 363 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 TRIM60Q495X7 471 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 XKR6Q5GH73 641 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 IER5LQ5T953 404 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 ZNF691Q5VV52 312 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 TTC23Q5W5X9 447 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 FRG2Q64ET8 278 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 FKBP9P1Q75LS8 142 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 B3GNT8Q7Z7M8 397 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 EGFL6Q8IUX8 553 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 ADHFE1Q8IWW8 467 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 PJA1Q8NG27 643 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 OR5K1Q8NHB7 308 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 NDNFQ8TB73 568 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 HIST1H2AHQ96KK5 128 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 FRG2BQ96QU4 278 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 HIST1H2AJQ99878 128 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 H2AFJQ9BTM1 129 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 AASDHPPTQ9NRN7 309 aa13.64□□□□□ -0.23
UBE3B-210ENST00000539599 KIAA1522Q9P206 1035 aaPredicted RBP13.64□□□□□ -0.23
UBE3B-210ENST00000539599 LSM7Q9UK45 103 aaKnown RBP13.64□□□□□ -0.23
UBE3B-210ENST00000539599 M0R129 80 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 PITPNM1O00562 1244 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 SGTAO43765 313 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 SOCS5O75159 536 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 FADS2O95864 444 aaKnown RBP13.63□□□□□ -0.23
UBE3B-210ENST00000539599 OLFM2O95897 454 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 COX7A2P14406 83 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 CD6P30203 668 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 IDUAP35475 653 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 OPRL1P41146 370 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 KIR3DL1P43629 444 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 SLC6A12P48065 614 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 SPINT3P49223 89 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 DGKEP52429 567 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 HTRA3P83110 453 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 TLE2Q04725 743 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 ITGADQ13349 1161 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 RAB33AQ14088 237 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 SKIV2LQ15477 1246 aaKnown RBP13.63□□□□□ -0.23
UBE3B-210ENST00000539599 HKDC1Q2TB90 917 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 GPR33Q49SQ1 333 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 LRIF1Q5T3J3 769 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 TPGS2Q68CL5 300 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 USP45Q70EL2 814 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 MCOLN3Q8TDD5 553 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 HDAC2Q92769 488 aaKnown RBP13.63□□□□□ -0.23
UBE3B-210ENST00000539599 CAPNS2Q96L46 248 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 ZNF558Q96NG5 402 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 SLC12A9Q9BXP2 914 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 RETREG1Q9H6L5 497 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 RDH14Q9HBH5 336 aa13.63□□□□□ -0.23
UBE3B-210ENST00000539599 PDP1Q9P0J1 537 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms