RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 NAB1Q13506 487 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 FASTKQ14296 549 aaKnown RBP17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 SF1Q15637 639 aaKnown RBP17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 FCRL6Q6DN72 434 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 RHBDD2Q6NTF9 364 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 ENDOVQ8N8Q3 282 aaKnown RBP17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 AENQ8WTP8 325 aaKnown RBP17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 CYTH2Q99418 400 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 GPR21Q99679 349 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 NLNQ9BYT8 704 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 SLC7A5P2Q9GIP4 190 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 ACSS3Q9H6R3 686 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 SMYD2Q9NRG4 433 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 EURLQ9NYK6 297 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 SPATA7Q9P0W8 599 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 KLHL42Q9P2K6 505 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 SLC17A6Q9P2U8 582 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 PLCL2Q9UPR0 1127 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 AP1M2Q9Y6Q5 423 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 PCSK5Q92824 1860 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 FKBP9O95302 570 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 AHSGP02765 367 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 ABHD2P08910 425 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 CBSLP0DN79 551 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 ERGP11308 486 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 CBSP35520 551 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 CYP2A13Q16696 494 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 UGT8Q16880 541 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 FAM69BQ5VUD6 431 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 FIGLAQ6QHK4 219 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 NEK10Q6ZWH5 1172 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 STRA8Q7Z7C7 330 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 RAB42Q8N4Z0 105 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 PPM1NQ8N819 430 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 OR2A1Q8NGT9 310 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 OR9A1PQ8NGU1 263 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 CD200R1Q8TD46 325 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 UBLCP1Q8WVY7 318 aaPredicted RBP17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 CPNE1Q99829 537 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 DPH2Q9BQC3 489 aaPredicted RBP17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 AARSD1Q9BTE6 412 aaKnown RBP17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 FUT8Q9BYC5 575 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 FAM117AQ9C073 453 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 DHRS7Q9Y394 339 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 COMMD10Q9Y6G5 202 aa17.16■□□□□ 0.34
TNFRSF1A-209ENST00000536717 NBASA2RRP1 2371 aa17.15■□□□□ 0.34
TNFRSF1A-209ENST00000536717 NUP210LQ5VU65 1888 aa17.15■□□□□ 0.34
TNFRSF1A-209ENST00000536717 CXorf49A8MYA2 514 aaPredicted RBP17.15■□□□□ 0.34
TNFRSF1A-209ENST00000536717 MYO1CO00159 1063 aa17.15■□□□□ 0.34
TNFRSF1A-209ENST00000536717 ZSCAN9O15535 394 aaPredicted RBP17.15■□□□□ 0.34
TNFRSF1A-209ENST00000536717 PIAS1O75925 651 aa17.15■□□□□ 0.34
TNFRSF1A-209ENST00000536717 GABRB3P28472 473 aa17.15■□□□□ 0.34
TNFRSF1A-209ENST00000536717 GRIA3P42263 894 aa17.15■□□□□ 0.34
TNFRSF1A-209ENST00000536717 GCGRP47871 477 aa17.15■□□□□ 0.34
TNFRSF1A-209ENST00000536717 ILF2Q12905 390 aaKnown RBP17.15■□□□□ 0.34
TNFRSF1A-209ENST00000536717 TTLL9Q3SXZ7 439 aa17.15■□□□□ 0.34
TNFRSF1A-209ENST00000536717 UBAP2Q5T6F2 1119 aaKnown RBP17.15■□□□□ 0.34
TNFRSF1A-209ENST00000536717 TLDC1Q6P9B6 456 aa17.15■□□□□ 0.34
TNFRSF1A-209ENST00000536717 ZNF655Q8N720 491 aaPredicted RBP17.15■□□□□ 0.34
TNFRSF1A-209ENST00000536717 MYRIPQ8NFW9 859 aa17.15■□□□□ 0.34
TNFRSF1A-209ENST00000536717 OR2L3Q8NG85 312 aa17.15■□□□□ 0.34
TNFRSF1A-209ENST00000536717 ADAMTS17Q8TE56 1095 aa17.15■□□□□ 0.34
TNFRSF1A-209ENST00000536717 CAVIN3Q969G5 261 aa17.15■□□□□ 0.34
TNFRSF1A-209ENST00000536717 ABHD17AQ96GS6 310 aa17.15■□□□□ 0.34
TNFRSF1A-209ENST00000536717 GBP5Q96PP8 586 aa17.15■□□□□ 0.34
TNFRSF1A-209ENST00000536717 INTS7Q9NVH2 962 aaKnown RBP17.15■□□□□ 0.34
TNFRSF1A-209ENST00000536717 DHCR7Q9UBM7 475 aaKnown RBP17.15■□□□□ 0.34
TNFRSF1A-209ENST00000536717 TCFL5Q9UL49 500 aa17.15■□□□□ 0.34
TNFRSF1A-209ENST00000536717 CORO1CQ9ULV4 474 aaPredicted RBP17.15■□□□□ 0.34
TNFRSF1A-209ENST00000536717 PSAT1Q9Y617 370 aa17.15■□□□□ 0.34
TNFRSF1A-209ENST00000536717 C1QAP02745 245 aa17.14■□□□□ 0.33
TNFRSF1A-209ENST00000536717 YBX1P67809 324 aaKnown RBP17.14■□□□□ 0.33
TNFRSF1A-209ENST00000536717 TIAL1Q01085 375 aaKnown RBP eCLIP17.14■□□□□ 0.33
TNFRSF1A-209ENST00000536717 NCF4Q15080 339 aa17.14■□□□□ 0.33
TNFRSF1A-209ENST00000536717 CYHR1Q6ZMK1 362 aa17.14■□□□□ 0.33
TNFRSF1A-209ENST00000536717 MCATQ8IVS2 390 aaKnown RBP17.14■□□□□ 0.33
TNFRSF1A-209ENST00000536717 UHMK1Q8TAS1 419 aaKnown RBP17.14■□□□□ 0.33
TNFRSF1A-209ENST00000536717 INPP5DQ92835 1189 aa17.14■□□□□ 0.33
TNFRSF1A-209ENST00000536717 ZUFSPQ96AP4 578 aa17.14■□□□□ 0.33
TNFRSF1A-209ENST00000536717 MIPEPQ99797 713 aa17.14■□□□□ 0.33
TNFRSF1A-209ENST00000536717 SNX7Q9UNH6 387 aa17.14■□□□□ 0.33
TNFRSF1A-209ENST00000536717 MAN2B2Q9Y2E5 1009 aa17.14■□□□□ 0.33
TNFRSF1A-209ENST00000536717 KLK4Q9Y5K2 254 aa17.14■□□□□ 0.33
TNFRSF1A-209ENST00000536717 DOCK10Q96BY6 2186 aa17.14■□□□□ 0.33
TNFRSF1A-209ENST00000536717 TARM1B6A8C7 271 aa17.13■□□□□ 0.33
TNFRSF1A-209ENST00000536717 GFYI3L273 518 aa17.13■□□□□ 0.33
TNFRSF1A-209ENST00000536717 CTIFO43310 598 aaKnown RBP17.13■□□□□ 0.33
TNFRSF1A-209ENST00000536717 NRP2O60462 931 aa17.13■□□□□ 0.33
TNFRSF1A-209ENST00000536717 CTSVO60911 334 aa17.13■□□□□ 0.33
TNFRSF1A-209ENST00000536717 ERLIN1O75477 346 aa17.13■□□□□ 0.33
TNFRSF1A-209ENST00000536717 CATP04040 527 aaKnown RBP17.13■□□□□ 0.33
TNFRSF1A-209ENST00000536717 MPC1LP0DKB6 136 aa17.13■□□□□ 0.33
TNFRSF1A-209ENST00000536717 ENO3P13929 434 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF1A-209ENST00000536717 AGXTP21549 392 aa17.13■□□□□ 0.33
TNFRSF1A-209ENST00000536717 GP5P40197 560 aa17.13■□□□□ 0.33
TNFRSF1A-209ENST00000536717 SLC29A2Q14542 456 aa17.13■□□□□ 0.33
TNFRSF1A-209ENST00000536717 EFTUD2Q15029 972 aaKnown RBP eCLIP17.13■□□□□ 0.338e-7■■■■■ 57.2
TNFRSF1A-209ENST00000536717 C1orf189Q5VU69 101 aa17.13■□□□□ 0.33
TNFRSF1A-209ENST00000536717 APLFQ8IW19 511 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms