RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 SLC46A1Q96NT5 459 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 CTRCQ99895 268 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 ASCL3Q9NQ33 180 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 CUEDC1Q9NWM3 386 aaPredicted RBP12.63□□□□□ -0.39
TMEM258-202ENST00000535042 SOHLH2Q9NX45 425 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 SLC39A1Q9NY26 324 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 NUDT4Q9NZJ9 180 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 CD274Q9NZQ7 290 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 XPR1Q9UBH6 696 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 PTBP2Q9UKA9 531 aaKnown RBP12.63□□□□□ -0.39
TMEM258-202ENST00000535042 ASB1Q9Y576 335 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 AK5Q9Y6K8 562 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 KNTC1P50748 2209 aa12.63□□□□□ -0.39
TMEM258-202ENST00000535042 CCDC189A1A4V9 331 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 C9orf172C9J069 976 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 MAP2K7O14733 419 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 BRINP1O60477 761 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 CTSVO60911 334 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 FKBP9O95302 570 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 CTSBP07858 339 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 RBP1P09455 135 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 CMPK1P30085 196 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 GGT5P36269 586 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 HSPA7P48741 367 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 HNMTP50135 292 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 FOXM1Q08050 763 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 CYP4F3Q08477 520 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 GPR19Q15760 415 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 TSNAXIP1Q2TAA8 658 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 CDKL4Q5MAI5 379 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 SULT1C3Q6IMI6 304 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 ZNF425Q6IV72 752 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 KLC3Q6P597 504 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 LCTLQ6UWM7 567 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 TRABD2AQ86V40 505 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 THOC6Q86W42 341 aaKnown RBP12.62□□□□□ -0.39
TMEM258-202ENST00000535042 KLHDC8AQ8IYD2 350 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 DNAJC22Q8N4W6 341 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 NXPE2Q96DL1 559 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 RNF31Q96EP0 1072 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 TCTN2Q96GX1 697 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 SCYL1Q96KG9 808 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 OR6C1Q96RD1 312 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 DPH7Q9BTV6 452 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 SYNPO2LQ9H987 977 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 PDE7BQ9NP56 450 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 MRPS30Q9NP92 439 aaKnown RBP12.62□□□□□ -0.39
TMEM258-202ENST00000535042 FBXO8Q9NRD0 319 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 FGF21Q9NSA1 209 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 SLC22A14Q9Y267 594 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 KLK4Q9Y5K2 254 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 B3GALT1Q9Y5Z6 326 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 KIF26BQ2KJY2 2108 aa12.62□□□□□ -0.39
TMEM258-202ENST00000535042 OR2A25A4D2G3 310 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 CDRT15L2A8MXV6 281 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 TARM1B6A8C7 271 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 H7BY64 318 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 TK2O00142 265 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 KLK8O60259 260 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 DXOO77932 396 aaKnown RBP12.61□□□□□ -0.39
TMEM258-202ENST00000535042 CAPNS1P04632 268 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 H2AFXP16104 143 aaPredicted RBP12.61□□□□□ -0.39
TMEM258-202ENST00000535042 CCND1P24385 295 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 MLLT3P42568 568 aaPredicted RBP12.61□□□□□ -0.39
TMEM258-202ENST00000535042 AGTR2P50052 363 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 ABATP80404 500 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 SLC18A2Q05940 514 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 TUBB3Q13509 450 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 DEFB110Q30KQ9 67 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 KRT71Q3SY84 523 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 CEP85LQ5SZL2 805 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 TMTC4Q5T4D3 741 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 FBXO42Q6P3S6 717 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 IGF2-ASQ6U949 168 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 PAQR7Q86WK9 346 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 CNPY4Q8N129 248 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 C4orf33Q8N1A6 199 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 TCAIMQ8N3R3 496 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 MDM1Q8TC05 714 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 ZUFSPQ96AP4 578 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 ZNF501Q96CX3 271 aaPredicted RBP12.61□□□□□ -0.39
TMEM258-202ENST00000535042 TSNARE1Q96NA8 513 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 PRAP1Q96NZ9 151 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 FCRL4Q96PJ5 515 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 TAAR9Q96RI9 348 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 MRPL57Q9BQC6 102 aaKnown RBP12.61□□□□□ -0.39
TMEM258-202ENST00000535042 CHRNA10Q9GZZ6 450 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 PCBD2Q9H0N5 130 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 C12orf65Q9H3J6 166 aaKnown RBP12.61□□□□□ -0.39
TMEM258-202ENST00000535042 WWOXQ9NZC7 414 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 FOXJ2Q9P0K8 574 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 CPSF2Q9P2I0 782 aaKnown RBP12.61□□□□□ -0.39
TMEM258-202ENST00000535042 PILRAQ9UKJ1 303 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 EMCNQ9ULC0 261 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 PCDHGA3Q9Y5H0 932 aa12.61□□□□□ -0.39
TMEM258-202ENST00000535042 LRRC14BA6NHZ5 514 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 SYCE1LA8MT33 242 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 C1QTNF9BB2RNN3 333 aa12.6□□□□□ -0.39
TMEM258-202ENST00000535042 POLR1CO15160 346 aaPredicted RBP12.6□□□□□ -0.39
TMEM258-202ENST00000535042 WDR47O94967 919 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms