RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 MSL3P1P0C860 447 aa23.27■■□□□ 1.32
SIPA1-210ENST00000534406 SLC5A2P31639 672 aa23.27■■□□□ 1.32
SIPA1-210ENST00000534406 ABATP80404 500 aa23.27■■□□□ 1.32
SIPA1-210ENST00000534406 IL11RAQ14626 422 aa23.27■■□□□ 1.32
SIPA1-210ENST00000534406 GPR19Q15760 415 aa23.27■■□□□ 1.32
SIPA1-210ENST00000534406 TSNAXIP1Q2TAA8 658 aa23.27■■□□□ 1.32
SIPA1-210ENST00000534406 FIGLAQ6QHK4 219 aa23.27■■□□□ 1.32
SIPA1-210ENST00000534406 CDHR3Q6ZTQ4 885 aa23.27■■□□□ 1.32
SIPA1-210ENST00000534406 TCAIMQ8N3R3 496 aa23.27■■□□□ 1.32
SIPA1-210ENST00000534406 OR56A3Q8NH54 315 aa23.27■■□□□ 1.32
SIPA1-210ENST00000534406 OR2W6PQ8NHA6 318 aa23.27■■□□□ 1.32
SIPA1-210ENST00000534406 ALKBH8Q96BT7 664 aaKnown RBP23.27■■□□□ 1.32
SIPA1-210ENST00000534406 CTRCQ99895 268 aa23.27■■□□□ 1.32
SIPA1-210ENST00000534406 ZPBPQ9BS86 351 aa23.27■■□□□ 1.32
SIPA1-210ENST00000534406 SLC6A20Q9NP91 592 aa23.27■■□□□ 1.32
SIPA1-210ENST00000534406 PCMTD2Q9NV79 361 aa23.27■■□□□ 1.32
SIPA1-210ENST00000534406 NUDT4Q9NZJ9 180 aa23.27■■□□□ 1.32
SIPA1-210ENST00000534406 RARRES3Q9UL19 164 aa23.27■■□□□ 1.32
SIPA1-210ENST00000534406 KLK4Q9Y5K2 254 aa23.27■■□□□ 1.32
SIPA1-210ENST00000534406 B3GALT1Q9Y5Z6 326 aa23.27■■□□□ 1.32
SIPA1-210ENST00000534406 HEATR5BQ9P2D3 2071 aa23.27■■□□□ 1.32
SIPA1-210ENST00000534406 WDFY3Q8IZQ1 3526 aa23.27■■□□□ 1.32
SIPA1-210ENST00000534406 NCF1BA6NI72 391 aaPredicted RBP23.26■■□□□ 1.31
SIPA1-210ENST00000534406 NCF1CA8MVU1 366 aaPredicted RBP23.26■■□□□ 1.31
SIPA1-210ENST00000534406 ERLIN1O75477 346 aa23.26■■□□□ 1.31
SIPA1-210ENST00000534406 RFPL1O75677 317 aa23.26■■□□□ 1.31
SIPA1-210ENST00000534406 COL6A2P12110 1019 aa23.26■■□□□ 1.31
SIPA1-210ENST00000534406 NCF1P14598 390 aaPredicted RBP23.26■■□□□ 1.31
SIPA1-210ENST00000534406 GRIA3P42263 894 aa23.26■■□□□ 1.31
SIPA1-210ENST00000534406 GLRBP48167 497 aa23.26■■□□□ 1.31
SIPA1-210ENST00000534406 PRDX1Q06830 199 aaKnown RBP23.26■■□□□ 1.31
SIPA1-210ENST00000534406 ACAP2Q15057 778 aa23.26■■□□□ 1.31
SIPA1-210ENST00000534406 CDKL4Q5MAI5 379 aa23.26■■□□□ 1.31
SIPA1-210ENST00000534406 PPP1R3BQ86XI6 285 aa23.26■■□□□ 1.31
SIPA1-210ENST00000534406 PDPRQ8NCN5 879 aa23.26■■□□□ 1.31
SIPA1-210ENST00000534406 RHEBL1Q8TAI7 183 aa23.26■■□□□ 1.31
SIPA1-210ENST00000534406 MZB1Q8WU39 189 aa23.26■■□□□ 1.31
SIPA1-210ENST00000534406 ZCCHC14Q8WYQ9 949 aaKnown RBP23.26■■□□□ 1.31
SIPA1-210ENST00000534406 ZUFSPQ96AP4 578 aa23.26■■□□□ 1.31
SIPA1-210ENST00000534406 ATOH8Q96SQ7 321 aa23.26■■□□□ 1.31
SIPA1-210ENST00000534406 DPH7Q9BTV6 452 aa23.26■■□□□ 1.31
SIPA1-210ENST00000534406 FAM60AQ9NP50 221 aa23.26■■□□□ 1.31
SIPA1-210ENST00000534406 WWOXQ9NZC7 414 aa23.26■■□□□ 1.31
SIPA1-210ENST00000534406 CD274Q9NZQ7 290 aa23.26■■□□□ 1.31
SIPA1-210ENST00000534406 FOXJ2Q9P0K8 574 aa23.26■■□□□ 1.31
SIPA1-210ENST00000534406 ANKMY1Q9P2S6 941 aa23.26■■□□□ 1.31
SIPA1-210ENST00000534406 SYCE1LA8MT33 242 aa23.25■■□□□ 1.31
SIPA1-210ENST00000534406 SUPT3HB4E1H0 165 aa23.25■■□□□ 1.31
SIPA1-210ENST00000534406 TARM1B6A8C7 271 aa23.25■■□□□ 1.31
SIPA1-210ENST00000534406 SUPT3HO75486 399 aa23.25■■□□□ 1.31
SIPA1-210ENST00000534406 FGF5P12034 268 aa23.25■■□□□ 1.31
SIPA1-210ENST00000534406 DEFB110Q30KQ9 67 aa23.25■■□□□ 1.31
SIPA1-210ENST00000534406 FCRL6Q6DN72 434 aa23.25■■□□□ 1.31
SIPA1-210ENST00000534406 SULT1C3Q6IMI6 304 aa23.25■■□□□ 1.31
SIPA1-210ENST00000534406 LCTLQ6UWM7 567 aa23.25■■□□□ 1.31
SIPA1-210ENST00000534406 BPHLQ86WA6 291 aaPredicted RBP23.25■■□□□ 1.31
SIPA1-210ENST00000534406 PLD6Q8N2A8 252 aaKnown RBP23.25■■□□□ 1.31
SIPA1-210ENST00000534406 RIBC1Q8N443 379 aaPredicted RBP23.25■■□□□ 1.31
SIPA1-210ENST00000534406 OR8K5Q8NH50 307 aa23.25■■□□□ 1.31
SIPA1-210ENST00000534406 ACMSDQ8TDX5 336 aa23.25■■□□□ 1.31
SIPA1-210ENST00000534406 N4BP2L2Q92802 583 aaPredicted RBP23.25■■□□□ 1.31
SIPA1-210ENST00000534406 PYCR2Q96C36 320 aa23.25■■□□□ 1.31
SIPA1-210ENST00000534406 RHBDF1Q96CC6 855 aa23.25■■□□□ 1.31
SIPA1-210ENST00000534406 GPR78Q96P69 363 aa23.25■■□□□ 1.31
SIPA1-210ENST00000534406 HAUS8Q9BT25 410 aa23.25■■□□□ 1.31
SIPA1-210ENST00000534406 EURLQ9NYK6 297 aa23.25■■□□□ 1.31
SIPA1-210ENST00000534406 CCDC151A5D8V7 595 aa23.24■■□□□ 1.31
SIPA1-210ENST00000534406 TMEM150CB9EJG8 249 aa23.24■■□□□ 1.31
SIPA1-210ENST00000534406 MT-ND3P03897 115 aa23.24■■□□□ 1.31
SIPA1-210ENST00000534406 CD82P27701 267 aa23.24■■□□□ 1.31
SIPA1-210ENST00000534406 PCBP4P57723 403 aaKnown RBP23.24■■□□□ 1.31
SIPA1-210ENST00000534406 ZXDCQ2QGD7 858 aaPredicted RBP23.24■■□□□ 1.31
SIPA1-210ENST00000534406 PTCHD3Q3KNS1 767 aa23.24■■□□□ 1.31
SIPA1-210ENST00000534406 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.24■■□□□ 1.31
SIPA1-210ENST00000534406 TECRLQ5HYJ1 363 aa23.24■■□□□ 1.31
SIPA1-210ENST00000534406 ZNF501Q96CX3 271 aaPredicted RBP23.24■■□□□ 1.31
SIPA1-210ENST00000534406 CNOT10Q9H9A5 744 aaKnown RBP23.24■■□□□ 1.31
SIPA1-210ENST00000534406 ACSL6Q9UKU0 697 aa23.24■■□□□ 1.31
SIPA1-210ENST00000534406 PLAAQ9Y263 795 aa23.24■■□□□ 1.31
SIPA1-210ENST00000534406 SDK2Q58EX2 2172 aa23.23■■□□□ 1.31
SIPA1-210ENST00000534406 OR2A25A4D2G3 310 aa23.23■■□□□ 1.31
SIPA1-210ENST00000534406 UBXN8O00124 270 aa23.23■■□□□ 1.31
SIPA1-210ENST00000534406 IPO13O94829 963 aaKnown RBP23.23■■□□□ 1.31
SIPA1-210ENST00000534406 CAPNS1P04632 268 aa23.23■■□□□ 1.31
SIPA1-210ENST00000534406 KRT15P19012 456 aa23.23■■□□□ 1.31
SIPA1-210ENST00000534406 KCNC1P48547 511 aa23.23■■□□□ 1.31
SIPA1-210ENST00000534406 YBX1P67809 324 aaKnown RBP23.23■■□□□ 1.31
SIPA1-210ENST00000534406 C17orf64Q86WR6 236 aa23.23■■□□□ 1.31
SIPA1-210ENST00000534406 SNIP1Q8TAD8 396 aaKnown RBP23.23■■□□□ 1.31
SIPA1-210ENST00000534406 FGF11Q92914 225 aa23.23■■□□□ 1.31
SIPA1-210ENST00000534406 SCYL1Q96KG9 808 aa23.23■■□□□ 1.31
SIPA1-210ENST00000534406 PLCD4Q9BRC7 762 aa23.23■■□□□ 1.31
SIPA1-210ENST00000534406 ROPN1BQ9BZX4 212 aaPredicted RBP23.23■■□□□ 1.31
SIPA1-210ENST00000534406 ROPN1Q9HAT0 212 aaPredicted RBP23.23■■□□□ 1.31
SIPA1-210ENST00000534406 ZNF358Q9NW07 568 aa23.23■■□□□ 1.31
SIPA1-210ENST00000534406 SPTBP11277 2137 aa23.23■■□□□ 1.31
SIPA1-210ENST00000534406 IGKV1-8A0A0C4DH67 115 aa23.22■■□□□ 1.31
SIPA1-210ENST00000534406 TLDC2A0PJX2 215 aa23.22■■□□□ 1.31
SIPA1-210ENST00000534406 HRH2P25021 359 aa23.22■■□□□ 1.31
SIPA1-210ENST00000534406 SLC6A12P48065 614 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms