RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 OR2T11Q8NH01 316 aa17.9■□□□□ 0.46
SMPD1-208ENST00000533123 HBEGFQ99075 208 aa17.9■□□□□ 0.46
SMPD1-208ENST00000533123 NRTNQ99748 197 aa17.9■□□□□ 0.46
SMPD1-208ENST00000533123 C1orf21Q9H246 121 aa17.9■□□□□ 0.46
SMPD1-208ENST00000533123 TRIT1Q9H3H1 467 aaKnown RBP17.9■□□□□ 0.46
SMPD1-208ENST00000533123 ERVMER34-1Q9H9K5 563 aa17.9■□□□□ 0.46
SMPD1-208ENST00000533123 UCKL1Q9NWZ5 548 aa17.9■□□□□ 0.46
SMPD1-208ENST00000533123 ZNF624Q9P2J8 865 aaPredicted RBP17.9■□□□□ 0.46
SMPD1-208ENST00000533123 SPASTQ9UBP0 616 aa17.9■□□□□ 0.46
SMPD1-208ENST00000533123 K7EPI3 171 aa17.9■□□□□ 0.46
SMPD1-208ENST00000533123 SLC22A2O15244 555 aa17.9■□□□□ 0.46
SMPD1-208ENST00000533123 STK16O75716 305 aa17.9■□□□□ 0.46
SMPD1-208ENST00000533123 ANP32DO95626 131 aa17.9■□□□□ 0.46
SMPD1-208ENST00000533123 OTCP00480 354 aa17.9■□□□□ 0.46
SMPD1-208ENST00000533123 MTHFD1P11586 935 aaKnown RBP17.9■□□□□ 0.46
SMPD1-208ENST00000533123 KRT33BQ14525 404 aa17.9■□□□□ 0.46
SMPD1-208ENST00000533123 SQLEQ14534 574 aa17.9■□□□□ 0.46
SMPD1-208ENST00000533123 DUOXA1Q1HG43 343 aa17.9■□□□□ 0.46
SMPD1-208ENST00000533123 DNAL1Q4LDG9 190 aa17.9■□□□□ 0.46
SMPD1-208ENST00000533123 DCUN1D3Q8IWE4 304 aa17.9■□□□□ 0.46
SMPD1-208ENST00000533123 TBC1D21Q8IYX1 336 aa17.9■□□□□ 0.46
SMPD1-208ENST00000533123 LMNTD1Q8N9Z9 388 aa17.9■□□□□ 0.46
SMPD1-208ENST00000533123 FBXO15Q8NCQ5 510 aaPredicted RBP17.9■□□□□ 0.46
SMPD1-208ENST00000533123 METTL6Q8TCB7 284 aa17.9■□□□□ 0.46
SMPD1-208ENST00000533123 RAD51AP1Q96B01 352 aa17.9■□□□□ 0.46
SMPD1-208ENST00000533123 PYCR2Q96C36 320 aa17.9■□□□□ 0.46
SMPD1-208ENST00000533123 RSRC1Q96IZ7 334 aaKnown RBP17.9■□□□□ 0.46
SMPD1-208ENST00000533123 CCDC138Q96M89 665 aa17.9■□□□□ 0.46
SMPD1-208ENST00000533123 ELF4Q99607 663 aaPredicted RBP17.9■□□□□ 0.46
SMPD1-208ENST00000533123 THTPAQ9BU02 230 aa17.9■□□□□ 0.46
SMPD1-208ENST00000533123 ATG10Q9H0Y0 220 aa17.9■□□□□ 0.46
SMPD1-208ENST00000533123 C15orf41Q9Y2V0 281 aa17.9■□□□□ 0.46
SMPD1-208ENST00000533123 AIM2O14862 343 aa17.89■□□□□ 0.45
SMPD1-208ENST00000533123 YY2O15391 372 aa17.89■□□□□ 0.45
SMPD1-208ENST00000533123 AQP9O43315 295 aa17.89■□□□□ 0.45
SMPD1-208ENST00000533123 PIAS2O75928 621 aa17.89■□□□□ 0.45
SMPD1-208ENST00000533123 CHEK2O96017 543 aa17.89■□□□□ 0.45
SMPD1-208ENST00000533123 RPN2P04844 631 aa17.89■□□□□ 0.45
SMPD1-208ENST00000533123 THRAP10827 490 aa17.89■□□□□ 0.45
SMPD1-208ENST00000533123 EPORP19235 508 aa17.89■□□□□ 0.45
SMPD1-208ENST00000533123 ITGAXP20702 1163 aa17.89■□□□□ 0.45
SMPD1-208ENST00000533123 ADSLP30566 484 aaPredicted RBP17.89■□□□□ 0.45
SMPD1-208ENST00000533123 BNIP3Q12983 259 aa17.89■□□□□ 0.45
SMPD1-208ENST00000533123 GRIK2Q13002 908 aa17.89■□□□□ 0.45
SMPD1-208ENST00000533123 CYLC2Q14093 348 aaPredicted RBP17.89■□□□□ 0.45
SMPD1-208ENST00000533123 CCDC6Q16204 474 aa17.89■□□□□ 0.45
SMPD1-208ENST00000533123 XKR7Q5GH72 579 aa17.89■□□□□ 0.45
SMPD1-208ENST00000533123 IYDQ6PHW0 289 aa17.89■□□□□ 0.45
SMPD1-208ENST00000533123 OR9I1Q8NGQ6 314 aa17.89■□□□□ 0.45
SMPD1-208ENST00000533123 OR9A1PQ8NGU1 263 aa17.89■□□□□ 0.45
SMPD1-208ENST00000533123 LRFN3Q9BTN0 628 aa17.89■□□□□ 0.45
SMPD1-208ENST00000533123 DENND2DQ9H6A0 471 aaPredicted RBP17.89■□□□□ 0.45
SMPD1-208ENST00000533123 DOLKQ9UPQ8 538 aa17.89■□□□□ 0.45
SMPD1-208ENST00000533123 GOLGA4Q13439 2230 aaKnown RBP17.89■□□□□ 0.45
SMPD1-208ENST00000533123 PEX11AO75192 247 aa17.88■□□□□ 0.45
SMPD1-208ENST00000533123 HGFP14210 728 aa17.88■□□□□ 0.45
SMPD1-208ENST00000533123 HOXD12P35452 270 aa17.88■□□□□ 0.45
SMPD1-208ENST00000533123 SLC19A1P41440 591 aa17.88■□□□□ 0.45
SMPD1-208ENST00000533123 PIK3CGP48736 1102 aa17.88■□□□□ 0.45
SMPD1-208ENST00000533123 NME5P56597 212 aa17.88■□□□□ 0.45
SMPD1-208ENST00000533123 FASTKQ14296 549 aaKnown RBP17.88■□□□□ 0.45
SMPD1-208ENST00000533123 TRIM61Q5EBN2 209 aa17.88■□□□□ 0.45
SMPD1-208ENST00000533123 MILR1Q7Z6M3 343 aa17.88■□□□□ 0.45
SMPD1-208ENST00000533123 NAGSQ8N159 534 aa17.88■□□□□ 0.45
SMPD1-208ENST00000533123 PPFIBP2Q8ND30 876 aa17.88■□□□□ 0.45
SMPD1-208ENST00000533123 RP9Q8TA86 221 aaKnown RBP17.88■□□□□ 0.45
SMPD1-208ENST00000533123 RCN3Q96D15 328 aa17.88■□□□□ 0.45
SMPD1-208ENST00000533123 IL17FQ96PD4 163 aa17.88■□□□□ 0.45
SMPD1-208ENST00000533123 STOX2Q9P2F5 926 aaPredicted RBP17.88■□□□□ 0.45
SMPD1-208ENST00000533123 ADAMTS9Q9P2N4 1935 aa17.88■□□□□ 0.45
SMPD1-208ENST00000533123 EPB42P16452 691 aa17.88■□□□□ 0.45
SMPD1-208ENST00000533123 IMPA1P29218 277 aa17.88■□□□□ 0.45
SMPD1-208ENST00000533123 HNMTP50135 292 aa17.88■□□□□ 0.45
SMPD1-208ENST00000533123 NUDT2P50583 147 aa17.88■□□□□ 0.45
SMPD1-208ENST00000533123 CDKL4Q5MAI5 379 aa17.88■□□□□ 0.45
SMPD1-208ENST00000533123 GKN2Q86XP6 184 aa17.88■□□□□ 0.45
SMPD1-208ENST00000533123 CEP76Q8TAP6 659 aa17.88■□□□□ 0.45
SMPD1-208ENST00000533123 ZNF480Q8WV37 535 aa17.88■□□□□ 0.45
SMPD1-208ENST00000533123 RTKNQ9BST9 563 aa17.88■□□□□ 0.45
SMPD1-208ENST00000533123 ARRDC1-AS1Q9H2J1 176 aa17.88■□□□□ 0.45
SMPD1-208ENST00000533123 SMOC1Q9H4F8 434 aa17.88■□□□□ 0.45
SMPD1-208ENST00000533123 CCDC167Q9P0B6 97 aa17.88■□□□□ 0.45
SMPD1-208ENST00000533123 B4DGG1 531 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 PSMD12O00232 456 aaPredicted RBP17.87■□□□□ 0.45
SMPD1-208ENST00000533123 FFAR3O14843 346 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 GPR42O15529 346 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 WDR47O94967 919 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 GGT5P36269 586 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 ARRB1P49407 418 aaPredicted RBP17.87■□□□□ 0.45
SMPD1-208ENST00000533123 SHBQ15464 509 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 DEFB133Q30KQ1 61 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 PTCHD3Q3KNS1 767 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 AGKQ53H12 422 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 ZC3H14Q6PJT7 736 aaKnown RBP17.87■□□□□ 0.45
SMPD1-208ENST00000533123 PAOXQ6QHF9 649 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 AGTRAPQ6RW13 159 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 EFL1Q7Z2Z2 1120 aaKnown RBP17.87■□□□□ 0.45
SMPD1-208ENST00000533123 ULK2Q8IYT8 1036 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 ZDHHC1Q8WTX9 485 aa17.87■□□□□ 0.45
SMPD1-208ENST00000533123 FBXL8Q96CD0 374 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms