RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 GOLGA4Q13439 2230 aaKnown RBP10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 SPEGQ15772 3267 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 DCHS1Q96JQ0 3298 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 EFCAB7A8K855 629 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 PLD2O14939 933 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 STK16O75716 305 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 IPO13O94829 963 aaKnown RBP10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 WDR47O94967 919 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 JMJD7P0C870 316 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 MTHFD2P13995 350 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 PVRP15151 417 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 ST6GAL1P15907 406 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 SPINK2P20155 84 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 TAC1P20366 129 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 HRH2P25021 359 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 PSMB5P28074 263 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 GRIA3P42263 894 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 GDF5P43026 501 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 ALDH18A1P54886 795 aaKnown RBP10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 ACY1Q03154 408 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 PFKFB4Q16877 469 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 TUBB8Q3ZCM7 444 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 CCDC153Q494R4 210 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 C3orf38Q5JPI3 329 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 FOXR1Q6PIV2 292 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 FIGLAQ6QHK4 219 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 C17orf64Q86WR6 236 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 FAM129CQ86XR2 697 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 D2HGDHQ8N465 521 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 ESAMQ96AP7 390 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 ZBTB9Q96C00 473 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 PGM2Q96G03 612 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 CAPS2Q9BXY5 557 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 CD244Q9BZW8 370 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 NRSN2Q9GZP1 204 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 CHRNA10Q9GZZ6 450 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 IQCGQ9H095 443 aaKnown RBP10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 POLR1BQ9H9Y6 1135 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 OCIAD1Q9NX40 245 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 SATB2Q9UPW6 733 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 WASF3Q9UPY6 502 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 BTRCQ9Y297 605 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 MSRB2Q9Y3D2 182 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 DYRK1BQ9Y463 629 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 TNPO3Q9Y5L0 923 aaKnown RBP10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 KCNE2Q9Y6J6 123 aa10.82□□□□□ -0.68
TRAPPC4-211ENST00000533012 ASXL3Q9C0F0 2248 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 TRABD2BA6NFA1 517 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 B4E171 279 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 KLK8O60259 260 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 FGF3P11487 239 aaPredicted RBP10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 CCL4P13236 92 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 FOLR1P15328 257 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 MAGP20916 626 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 RBMS1P29558 406 aaKnown RBP10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 TSPAN7P41732 249 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 MLLT3P42568 568 aaPredicted RBP10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 SLC6A12P48065 614 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 HSPA7P48741 367 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 MC2RQ01718 297 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 FOXM1Q08050 763 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 C18orf21Q32NC0 220 aaPredicted RBP10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 TMEM164Q5U3C3 297 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 CYB5D1Q6P9G0 228 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 CDHR3Q6ZTQ4 885 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 ADCK2Q7Z695 626 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 BPHLQ86WA6 291 aaPredicted RBP10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 KLHDC8AQ8IYD2 350 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 LSMEM2Q8N112 164 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 TMEM151AQ8N4L1 468 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 PTGR2Q8N8N7 351 aaPredicted RBP10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 C19orf47Q8N9M1 422 aaKnown RBP10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 BANPQ8N9N5 519 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 N4BP2L2Q92802 583 aaPredicted RBP10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 OR4K3Q96R72 315 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 OR6C1Q96RD1 312 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 TAAR9Q96RI9 348 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 DPH7Q9BTV6 452 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 FBXO8Q9NRD0 319 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 TMEM184CQ9NVA4 438 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 SLC39A1Q9NY26 324 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 ANKMY1Q9P2S6 941 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 KLHL20Q9Y2M5 609 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 PCDHGA8Q9Y5G5 932 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 KLK4Q9Y5K2 254 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 AK5Q9Y6K8 562 aa10.81□□□□□ -0.68
TRAPPC4-211ENST00000533012 RP1P56715 2156 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 STX16-NPEPL1H3BU86 382 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 H7BY64 318 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 K7EPI3 171 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 TK2O00142 265 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 STX16O14662 325 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 POLR1CO15160 346 aaPredicted RBP10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 CCNT2O60583 730 aaKnown RBP10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 PRAMEF10O60809 474 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 H2AFYO75367 372 aaKnown RBP10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 SPAG7O75391 227 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 TNFSF15O95150 251 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 EBLN1P0CF75 366 aa10.8□□□□□ -0.68
TRAPPC4-211ENST00000533012 HGFP14210 728 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms