RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 A0A0J9YVX5 310 aa16.07■□□□□ 0.16
CPSF1-207ENST00000531727 PSIP1O75475 530 aaKnown RBP16.07■□□□□ 0.16
CPSF1-207ENST00000531727 MED26O95402 600 aa16.07■□□□□ 0.16
CPSF1-207ENST00000531727 PKMP14618 531 aaKnown RBP16.07■□□□□ 0.16
CPSF1-207ENST00000531727 VPS41P49754 854 aa16.07■□□□□ 0.16
CPSF1-207ENST00000531727 YBX1P67809 324 aaKnown RBP16.07■□□□□ 0.16
CPSF1-207ENST00000531727 GPS1Q13098 491 aa16.07■□□□□ 0.16
CPSF1-207ENST00000531727 NR6A1Q15406 480 aa16.07■□□□□ 0.16
CPSF1-207ENST00000531727 RBBP7Q16576 425 aa16.07■□□□□ 0.16
CPSF1-207ENST00000531727 KLHL38Q2WGJ6 581 aa16.07■□□□□ 0.16
CPSF1-207ENST00000531727 TUBB8Q3ZCM7 444 aa16.07■□□□□ 0.16
CPSF1-207ENST00000531727 ANKRD20A4Q4UJ75 823 aa16.07■□□□□ 0.16
CPSF1-207ENST00000531727 ACSBG2Q5FVE4 666 aa16.07■□□□□ 0.16
CPSF1-207ENST00000531727 CRB2Q5IJ48 1285 aa16.07■□□□□ 0.16
CPSF1-207ENST00000531727 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.07■□□□□ 0.16
CPSF1-207ENST00000531727 NEPROQ6NW34 567 aa16.07■□□□□ 0.16
CPSF1-207ENST00000531727 PRMT9Q6P2P2 845 aa16.07■□□□□ 0.16
CPSF1-207ENST00000531727 CASC4Q6P4E1 433 aa16.07■□□□□ 0.16
CPSF1-207ENST00000531727 CAND1Q86VP6 1230 aaKnown RBP16.07■□□□□ 0.16
CPSF1-207ENST00000531727 CILP2Q8IUL8 1156 aa16.07■□□□□ 0.16
CPSF1-207ENST00000531727 DTWD1Q8N5C7 304 aa16.07■□□□□ 0.16
CPSF1-207ENST00000531727 PRR7Q8TB68 274 aa16.07■□□□□ 0.16
CPSF1-207ENST00000531727 VPS50Q96JG6 964 aa16.07■□□□□ 0.16
CPSF1-207ENST00000531727 ZFYVE21Q9BQ24 234 aa16.07■□□□□ 0.16
CPSF1-207ENST00000531727 DPH7Q9BTV6 452 aa16.07■□□□□ 0.16
CPSF1-207ENST00000531727 ACAT2Q9BWD1 397 aa16.07■□□□□ 0.16
CPSF1-207ENST00000531727 FAM114A2Q9NRY5 505 aa16.07■□□□□ 0.16
CPSF1-207ENST00000531727 INTS10Q9NVR2 710 aaKnown RBP16.07■□□□□ 0.16
CPSF1-207ENST00000531727 SAMD15Q9P1V8 674 aa16.07■□□□□ 0.16
CPSF1-207ENST00000531727 PLEKHB1Q9UF11 243 aaPredicted RBP16.07■□□□□ 0.16
CPSF1-207ENST00000531727 VPS9D1Q9Y2B5 631 aa16.07■□□□□ 0.16
CPSF1-207ENST00000531727 PCDHGA10Q9Y5H3 936 aa16.07■□□□□ 0.16
CPSF1-207ENST00000531727 NAV2Q8IVL1 2488 aa16.07■□□□□ 0.16
CPSF1-207ENST00000531727 NBPF19A0A087WUL8 3843 aa16.07■□□□□ 0.16
CPSF1-207ENST00000531727 E5RI56 91 aa16.06■□□□□ 0.16
CPSF1-207ENST00000531727 MYO1CO00159 1063 aa16.06■□□□□ 0.16
CPSF1-207ENST00000531727 PHF2O75151 1096 aa16.06■□□□□ 0.16
CPSF1-207ENST00000531727 CBX6O95503 412 aa16.06■□□□□ 0.16
CPSF1-207ENST00000531727 KRT14P02533 472 aa16.06■□□□□ 0.16
CPSF1-207ENST00000531727 EIF2S1P05198 315 aaKnown RBP16.06■□□□□ 0.16
CPSF1-207ENST00000531727 RNF224P0DH78 156 aa16.06■□□□□ 0.16
CPSF1-207ENST00000531727 ERVK-10P10266 1014 aa16.06■□□□□ 0.16
CPSF1-207ENST00000531727 MLNP12872 115 aa16.06■□□□□ 0.16
CPSF1-207ENST00000531727 CARSP49589 748 aaKnown RBP16.06■□□□□ 0.16
CPSF1-207ENST00000531727 ARHGAP19Q14CB8 494 aa16.06■□□□□ 0.16
CPSF1-207ENST00000531727 AGAP7PQ5VUJ5 663 aa16.06■□□□□ 0.16
CPSF1-207ENST00000531727 IRAK1BP1Q5VVH5 260 aa16.06■□□□□ 0.16
CPSF1-207ENST00000531727 ANKRD22Q5VYY1 191 aa16.06■□□□□ 0.16
CPSF1-207ENST00000531727 FBXO42Q6P3S6 717 aa16.06■□□□□ 0.16
CPSF1-207ENST00000531727 IGFL2Q6UWQ7 119 aa16.06■□□□□ 0.16
CPSF1-207ENST00000531727 CUZD1Q86UP6 607 aa16.06■□□□□ 0.16
CPSF1-207ENST00000531727 LRRC8AQ8IWT6 810 aa16.06■□□□□ 0.16
CPSF1-207ENST00000531727 STT3BQ8TCJ2 826 aa16.06■□□□□ 0.16
CPSF1-207ENST00000531727 PPP4R1Q8TF05 950 aa16.06■□□□□ 0.16
CPSF1-207ENST00000531727 SMPDL3AQ92484 453 aa16.06■□□□□ 0.16
CPSF1-207ENST00000531727 AGAP4Q96P64 663 aa16.06■□□□□ 0.16
CPSF1-207ENST00000531727 WDR77Q9BQA1 342 aaPredicted RBP16.06■□□□□ 0.16
CPSF1-207ENST00000531727 TRIM56Q9BRZ2 755 aaKnown RBP16.06■□□□□ 0.16
CPSF1-207ENST00000531727 CRB3Q9BUF7 120 aa16.06■□□□□ 0.16
CPSF1-207ENST00000531727 COPG1Q9Y678 874 aaKnown RBP16.06■□□□□ 0.16
CPSF1-207ENST00000531727 PRRC2CQ9Y520 2896 aaKnown RBP16.05■□□□□ 0.16
CPSF1-207ENST00000531727 FAM237BA0A1B0GVD1 139 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 MAGEB16A2A368 324 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 H0YGG7 62 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 USP1O94782 785 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 DDAH2O95865 285 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 CATP04040 527 aaKnown RBP16.05■□□□□ 0.16
CPSF1-207ENST00000531727 RPA3P35244 121 aaPredicted RBP16.05■□□□□ 0.16
CPSF1-207ENST00000531727 GLRBP48167 497 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 CLCN7P51798 805 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 EMP3P54852 163 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 ARF3P61204 181 aaPredicted RBP16.05■□□□□ 0.16
CPSF1-207ENST00000531727 CCZ1BP86790 482 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 CCZ1P86791 482 aaPredicted RBP16.05■□□□□ 0.16
CPSF1-207ENST00000531727 OCA2Q04671 838 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 KLC1Q07866 573 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 DHX34Q14147 1143 aaKnown RBP16.05■□□□□ 0.16
CPSF1-207ENST00000531727 HIF1AQ16665 826 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 MUM1Q2TAK8 710 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 PRTGQ2VWP7 1150 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 TTLL9Q3SXZ7 439 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 C4orf17Q53FE4 359 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 ZNF470Q6ECI4 717 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 TTC27Q6P3X3 843 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 SUSD1Q6UWL2 747 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 NEK10Q6ZWH5 1172 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 PAQR7Q86WK9 346 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 PARP9Q8IXQ6 854 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 OR11G2Q8NGC1 345 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 ZNF669Q96BR6 464 aaPredicted RBP16.05■□□□□ 0.16
CPSF1-207ENST00000531727 MIEF2Q96C03 454 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 C10orf90Q96M02 699 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 PKP4Q99569 1192 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 BARD1Q99728 777 aaKnown RBP16.05■□□□□ 0.16
CPSF1-207ENST00000531727 PLCD4Q9BRC7 762 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 LHPPQ9H008 270 aa16.05■□□□□ 0.16
CPSF1-207ENST00000531727 MRPS30Q9NP92 439 aaKnown RBP16.05■□□□□ 0.16
CPSF1-207ENST00000531727 STOX2Q9P2F5 926 aaPredicted RBP16.05■□□□□ 0.16
CPSF1-207ENST00000531727 ZNF282Q9UDV7 671 aaPredicted RBP16.05■□□□□ 0.16
CPSF1-207ENST00000531727 CSAG2Q9Y5P2 127 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms