RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 AQP12AQ8IXF9 295 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 KLHDC8AQ8IYD2 350 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 C1orf87Q8N0U7 546 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 RYBPQ8N488 228 aaPredicted RBP4.13□□□□□ -1.75
USP47-211ENST00000531513 CPSF7Q8N684 471 aaKnown RBP4.13□□□□□ -1.75
USP47-211ENST00000531513 L3MBTL4Q8NA19 623 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 KIAA1524Q8TCG1 905 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 URGCPQ8TCY9 931 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 RNASE8Q8TDE3 154 aaKnown RBP4.13□□□□□ -1.75
USP47-211ENST00000531513 PRCCQ92733 491 aaPredicted RBP4.13□□□□□ -1.75
USP47-211ENST00000531513 CDKN2AIPNLQ96HQ2 116 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 FAM111AQ96PZ2 611 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 PANX3Q96QZ0 392 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 ATG101Q9BSB4 218 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 DCLK3Q9C098 648 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 VN1R1Q9GZP7 353 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 C6orf106Q9H6K1 298 aaPredicted RBP4.13□□□□□ -1.75
USP47-211ENST00000531513 LIN28AQ9H9Z2 209 aaKnown RBP4.13□□□□□ -1.75
USP47-211ENST00000531513 GSN-AS1Q9NRJ2 163 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 TAS2R3Q9NYW6 316 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 MAD2L2Q9UI95 211 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 SH3BGRL2Q9UJC5 107 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 STRAPQ9Y3F4 350 aaKnown RBP4.13□□□□□ -1.75
USP47-211ENST00000531513 HBS1LQ9Y450 684 aaKnown RBP4.13□□□□□ -1.75
USP47-211ENST00000531513 PCDHGB1Q9Y5G3 927 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 PTGDR2Q9Y5Y4 395 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 PDS5AQ29RF7 1337 aaKnown RBP4.13□□□□□ -1.75
USP47-211ENST00000531513 PCDH11YQ9BZA8 1340 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 TEX13DA0A0J9YY54 714 aaPredicted RBP4.12□□□□□ -1.75
USP47-211ENST00000531513 NDC80O14777 642 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 MID1O15344 667 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 RPS6KA5O75582 802 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 CLDN14O95500 239 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 H1F0P07305 194 aaKnown RBP4.12□□□□□ -1.75
USP47-211ENST00000531513 ABHD2P08910 425 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 MYOD1P15172 320 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 CSF2RAP15509 400 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 GM2AP17900 193 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 CYP2A7P20853 494 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 AHCYP23526 432 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 TMPOP42166 694 aaKnown RBP4.12□□□□□ -1.75
USP47-211ENST00000531513 RPL21P46778 160 aaKnown RBP4.12□□□□□ -1.75
USP47-211ENST00000531513 RABIFP47224 123 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 ZNF155Q12901 538 aaPredicted RBP4.12□□□□□ -1.75
USP47-211ENST00000531513 ILF2Q12905 390 aaKnown RBP4.12□□□□□ -1.75
USP47-211ENST00000531513 INAQ16352 499 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 CA9Q16790 459 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 IZUMO4Q1ZYL8 232 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 TDRD12Q587J7 1177 aaKnown RBP4.12□□□□□ -1.75
USP47-211ENST00000531513 LRRC38Q5VT99 294 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 SUSD4Q5VX71 490 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 KCTD11Q693B1 232 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 GALNT17Q6IS24 598 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 PRSS55Q6UWB4 352 aaPredicted RBP4.12□□□□□ -1.75
USP47-211ENST00000531513 ABRAXAS1Q6UWZ7 409 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 AMIGO1Q86WK6 493 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 NUDT13Q86X67 352 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 MEX3DQ86XN8 651 aaKnown RBP4.12□□□□□ -1.75
USP47-211ENST00000531513 SERPINA12Q8IW75 414 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 PGBD5Q8N414 524 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 RASGEF1AQ8N9B8 481 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 CLEC1AQ8NC01 280 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 RDM1Q8NG50 284 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 TMEM255BQ8WV15 326 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 CCDC107Q8WV48 283 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 CKAP2Q8WWK9 683 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 TANKQ92844 425 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 P2RX5Q93086 422 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 AP2M1Q96CW1 435 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 MTBPQ96DY7 904 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 THOC1Q96FV9 657 aaKnown RBP4.12□□□□□ -1.75
USP47-211ENST00000531513 C3orf30Q96M34 536 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 SPATA13Q96N96 652 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 S1PR5Q9H228 398 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 Q9H8V8 135 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 TRMT6Q9UJA5 497 aaKnown RBP4.12□□□□□ -1.75
USP47-211ENST00000531513 WDR83OSQ9Y284 106 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 JRKLQ9Y4A0 524 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 TRIM17Q9Y577 477 aa4.12□□□□□ -1.75
USP47-211ENST00000531513 TRIP12Q14669 1992 aaPredicted RBP4.11□□□□□ -1.75
USP47-211ENST00000531513 TRBV2A0A0J9YWF9 115 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 ZCWPW2A0A1B0GU75 182 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 RGSL1A5PLK6 1076 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 PLOD2O00469 737 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 NTN3O00634 580 aaPredicted RBP4.11□□□□□ -1.75
USP47-211ENST00000531513 WDR1O75083 606 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 MOCS2O96007 188 aaPredicted RBP4.11□□□□□ -1.75
USP47-211ENST00000531513 IGHDP01880 384 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 SBK2P0C263 348 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 FAM106CPP0CH98 169 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 IRF2P14316 349 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 POLR2CP19387 275 aaPredicted RBP4.11□□□□□ -1.75
USP47-211ENST00000531513 PIK3R1P27986 724 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 MAGEB1P43366 347 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 ARCN1P48444 511 aaKnown RBP4.11□□□□□ -1.75
USP47-211ENST00000531513 BRWD1-AS2P59051 145 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 HILS1P60008 231 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 ISL1P61371 349 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 PDE7AQ13946 482 aa4.11□□□□□ -1.75
USP47-211ENST00000531513 GAMTQ14353 236 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms