RNA–Protein interactions for RNA: ENST00000528953.1

AP002008.2-203, humanhuman

TSL 1 (best)

Gene AP002008.2, Length 707 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.2-203ENST00000528953 GALPQ9UBC7 116 aa16.77■□□□□ 0.28
AP002008.2-203ENST00000528953 LOC105369274A0A096LPK9 316 aa16.76■□□□□ 0.27
AP002008.2-203ENST00000528953 LOC102723532A0A0G2JNH3 316 aa16.76■□□□□ 0.27
AP002008.2-203ENST00000528953 OR2A25A4D2G3 310 aa16.76■□□□□ 0.27
AP002008.2-203ENST00000528953 SDR42E2A6NKP2 422 aa16.76■□□□□ 0.27
AP002008.2-203ENST00000528953 TCP11X1B4DZS4 312 aa16.76■□□□□ 0.27
AP002008.2-203ENST00000528953 MYO1CO00159 1063 aa16.76■□□□□ 0.27
AP002008.2-203ENST00000528953 SOCS6O14544 535 aa16.76■□□□□ 0.27
AP002008.2-203ENST00000528953 NRP2O60462 931 aa16.76■□□□□ 0.27
AP002008.2-203ENST00000528953 PSIP1O75475 530 aaKnown RBP16.76■□□□□ 0.27
AP002008.2-203ENST00000528953 CATP04040 527 aaKnown RBP16.76■□□□□ 0.27
AP002008.2-203ENST00000528953 ITGA3P26006 1051 aa16.76■□□□□ 0.27
AP002008.2-203ENST00000528953 THOC5Q13769 683 aaKnown RBP16.76■□□□□ 0.27
AP002008.2-203ENST00000528953 ARHGAP19Q14CB8 494 aa16.76■□□□□ 0.27
AP002008.2-203ENST00000528953 SHISA6Q6ZSJ9 500 aa16.76■□□□□ 0.27
AP002008.2-203ENST00000528953 OR4N4Q8N0Y3 316 aa16.76■□□□□ 0.27
AP002008.2-203ENST00000528953 ZNF669Q96BR6 464 aaPredicted RBP16.76■□□□□ 0.27
AP002008.2-203ENST00000528953 MS4A14Q96JA4 679 aa16.76■□□□□ 0.27
AP002008.2-203ENST00000528953 PBKQ96KB5 322 aa16.76■□□□□ 0.27
AP002008.2-203ENST00000528953 ZFYVE21Q9BQ24 234 aa16.76■□□□□ 0.27
AP002008.2-203ENST00000528953 DPH7Q9BTV6 452 aa16.76■□□□□ 0.27
AP002008.2-203ENST00000528953 SOX17Q9H6I2 414 aaPredicted RBP16.76■□□□□ 0.27
AP002008.2-203ENST00000528953 SLC6A20Q9NP91 592 aa16.76■□□□□ 0.27
AP002008.2-203ENST00000528953 ZC3H7BQ9UGR2 993 aaKnown RBP16.76■□□□□ 0.27
AP002008.2-203ENST00000528953 JRKLQ9Y4A0 524 aa16.76■□□□□ 0.27
AP002008.2-203ENST00000528953 HS3ST3B1Q9Y662 390 aa16.76■□□□□ 0.27
AP002008.2-203ENST00000528953 MAU2Q9Y6X3 613 aa16.76■□□□□ 0.27
AP002008.2-203ENST00000528953 SHANK1Q9Y566 2161 aa16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 ESPL1Q14674 2120 aa16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 ANKRD12Q6UB98 2062 aa16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 CTAGE9A4FU28 777 aa16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 VSTM2BA6NLU5 285 aa16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 USP1O94782 785 aa16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 EIF2S1P05198 315 aaKnown RBP16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 ERVK-10P10266 1014 aa16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 RPA3P35244 121 aaPredicted RBP16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 HSD17B2P37059 387 aa16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 COILP38432 576 aaPredicted RBP16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 CLCN7P51798 805 aa16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 YBX1P67809 324 aaKnown RBP16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 TTLL9Q3SXZ7 439 aa16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 PRAMEF13Q5VWM6 474 aa16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 PRMT9Q6P2P2 845 aa16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 KIRREL2Q6UWL6 708 aa16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 NEK10Q6ZWH5 1172 aa16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 ZADH2Q8N4Q0 377 aa16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 DTWD1Q8N5C7 304 aa16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 VPS50Q96JG6 964 aa16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 SERPINB12Q96P63 405 aa16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 NAP1L3Q99457 506 aaPredicted RBP16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 ILKAPQ9H0C8 392 aaPredicted RBP16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 CCDC68Q9H2F9 335 aa16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 LRRC4CQ9HCJ2 640 aa16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 ZNF304Q9HCX3 659 aa16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 MRPS30Q9NP92 439 aaKnown RBP16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 SEMA3GQ9NS98 782 aa16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 KLHL42Q9P2K6 505 aa16.75■□□□□ 0.27
AP002008.2-203ENST00000528953 ZNF839A8K0R7 811 aa16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 GOLGA8MH3BSY2 632 aa16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 PHF2O75151 1096 aa16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 ALOX12BO75342 701 aa16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 VPS26AO75436 327 aa16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 MED26O95402 600 aa16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 TSTA3Q13630 321 aaPredicted RBP16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 RBBP7Q16576 425 aa16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 CYP1B1Q16678 543 aa16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 MUM1Q2TAK8 710 aa16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 IRAK1BP1Q5VVH5 260 aa16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 FBXO42Q6P3S6 717 aa16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 CCDC137Q6PK04 289 aaKnown RBP16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 SUSD1Q6UWL2 747 aa16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 Q6ZS92 163 aa16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 DENND6AQ8IWF6 608 aa16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 REXO1L1PQ8IX06 675 aa16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 GIMAP7Q8NHV1 300 aa16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 KCNJ9Q92806 393 aa16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 SNRNP40Q96DI7 357 aaKnown RBP16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 C19orf60Q96EN9 201 aa16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 SLC30A3Q99726 388 aa16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 PLCD4Q9BRC7 762 aa16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 CRB3Q9BUF7 120 aa16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 ZBTB20Q9HC78 741 aaPredicted RBP16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 FBXO6Q9NRD1 293 aaPredicted RBP16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 NEU2Q9Y3R4 380 aa16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 CCDC88CQ9P219 2028 aa16.74■□□□□ 0.27
AP002008.2-203ENST00000528953 ZCWPW2A0A1B0GU75 182 aa16.73■□□□□ 0.27
AP002008.2-203ENST00000528953 H0YGG7 62 aa16.73■□□□□ 0.27
AP002008.2-203ENST00000528953 PGRMC1O00264 195 aaKnown RBP16.73■□□□□ 0.27
AP002008.2-203ENST00000528953 KIF5CO60282 957 aa16.73■□□□□ 0.27
AP002008.2-203ENST00000528953 CCNDBP1O95273 360 aa16.73■□□□□ 0.27
AP002008.2-203ENST00000528953 F7P08709 466 aaPredicted RBP16.73■□□□□ 0.27
AP002008.2-203ENST00000528953 MAGEA3P43357 314 aa16.73■□□□□ 0.27
AP002008.2-203ENST00000528953 PNLIPRP1P54315 467 aa16.73■□□□□ 0.27
AP002008.2-203ENST00000528953 EMP3P54852 163 aa16.73■□□□□ 0.27
AP002008.2-203ENST00000528953 ARF3P61204 181 aaPredicted RBP16.73■□□□□ 0.27
AP002008.2-203ENST00000528953 OCA2Q04671 838 aa16.73■□□□□ 0.27
AP002008.2-203ENST00000528953 CTBP1Q13363 440 aa16.73■□□□□ 0.27
AP002008.2-203ENST00000528953 MRPL49Q13405 166 aaKnown RBP16.73■□□□□ 0.27
AP002008.2-203ENST00000528953 PRTGQ2VWP7 1150 aa16.73■□□□□ 0.27
AP002008.2-203ENST00000528953 TUBB8Q3ZCM7 444 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms