RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 MARVELD2Q8N4S9 558 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 ZNF480Q8WV37 535 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 NSMCE2Q96MF7 247 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 HHIPQ96QV1 700 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 HAUS8Q9BT25 410 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 OR52A5Q9H2C5 316 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 SLAMF8Q9P0V8 285 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 EGFL7Q9UHF1 273 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 ADGRE2Q9UHX3 823 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 ANAPC2Q9UJX6 822 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 ACSL5Q9ULC5 683 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 PPT2Q9UMR5 302 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 IGLON5A6NGN9 336 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 A6NHS1 94 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 E7EQ34 232 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 PLK4O00444 970 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 SCELO95171 688 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 C1GALT1C1LP0DN25 315 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 C7P10643 843 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 SDC1P18827 310 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 KIR2DL1P43626 348 aaPredicted RBP14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 RPS21P63220 83 aaKnown RBP14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 ACSM2AQ08AH3 577 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 MTAPQ13126 283 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 STARD3Q14849 445 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 CYP51A1Q16850 503 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 INTS11Q5TA45 600 aaKnown RBP14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 ACSM2BQ68CK6 577 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 TMEM154Q6P9G4 183 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 LCTLQ6UWM7 567 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 C11orf96Q7Z7L8 435 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 IFNEQ86WN2 208 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 HEATR4Q86WZ0 1026 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 DCUN1D3Q8IWE4 304 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 RIMKLAQ8IXN7 391 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 LAS2Q8IYD9 372 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 ADGRG5Q8IZF4 528 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 LILRA3Q8N6C8 439 aaPredicted RBP14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 ASB12Q8WXK4 309 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 LRTOMTQ8WZ04 291 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 FGF14Q92915 247 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 FAM131CQ96AQ9 280 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 CXorf40BQ96DE9 158 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 CHFRQ96EP1 664 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 APIPQ96GX9 242 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 CENPNQ96H22 339 aaPredicted RBP14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 PPM1MQ96MI6 270 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 GBP5Q96PP8 586 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 OR4K3Q96R72 315 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 PRPF18Q99633 342 aaKnown RBP14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 GABRG3Q99928 467 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 GDF15Q99988 308 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 TRPM6Q9BX84 2022 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 ZDHHC5Q9C0B5 715 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 PCBD2Q9H0N5 130 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 PHPT1Q9NRX4 125 aaPredicted RBP14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 SPATA7Q9P0W8 599 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 CLEC1BQ9P126 229 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 FAM8A1Q9UBU6 413 aa14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.3□□□□□ -0.12
ECHDC1-220ENST00000528402 TCRBV5S2A0A599 114 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 AKAP10O43572 662 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 ANXA6P08133 673 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 NPPBP16860 134 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 ZNF26P17031 533 aaPredicted RBP14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 GGT1P19440 569 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 CD22P20273 847 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 NTSR1P30989 418 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 RPL3P39023 403 aaKnown RBP14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 TAS2R38P59533 333 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 CYP4F3Q08477 520 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 SGCGQ13326 291 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 WSCD2Q2TBF2 565 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 CCSMST1Q4G0I0 132 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 METRNLQ641Q3 311 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 PPP4R4Q6NUP7 873 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 TRIM74Q86UV6 250 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 SYT12Q8IV01 421 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 RAB42Q8N4Z0 105 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 VPS37AQ8NEZ2 397 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 OR7G3Q8NG95 312 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 OR8J2Q8NGG1 315 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 CHTF18Q8WVB6 975 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 APOLD1Q96LR9 279 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 ZNF583Q96ND8 569 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 TMEM74Q96NL1 305 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 C9orf16Q9BUW7 83 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 THUMPD3Q9BV44 507 aaKnown RBP14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 OSBPL11Q9BXB4 747 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 C1QTNF2Q9BXJ5 285 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 UGT2B28Q9BY64 529 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 PITHD1Q9GZP4 211 aaPredicted RBP14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 TRPV5Q9NQA5 729 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 CCDC177Q9NQR7 707 aaPredicted RBP14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 FAM120CQ9NX05 1096 aaKnown RBP14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 VAPAQ9P0L0 249 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 AURKCQ9UQB9 309 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 DLGAP4Q9Y2H0 992 aa14.29□□□□□ -0.12
ECHDC1-220ENST00000528402 TRBV5-3A0A0A0MS03 114 aa14.28□□□□□ -0.12
ECHDC1-220ENST00000528402 K7EQS6 105 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms