RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 ACOT13Q9NPJ3 140 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 LATS2Q9NRM7 1088 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 ELOVL2Q9NXB9 296 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 CCL27Q9Y4X3 112 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 TTC34A8MYJ7 566 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 FAM220BPB1ANY3 271 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 ERN1O75460 977 aaKnown RBP12.17□□□□□ -0.46
CAPN1-208ENST00000527323 VNN2O95498 520 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 B3GALT4O96024 378 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 IRF1P10914 325 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 CD40LGP29965 261 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 SELENBP1Q13228 472 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 ARHGEF7Q14155 803 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 LAIR1Q6GTX8 287 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 ZCCHC8Q6NZY4 707 aaKnown RBP12.17□□□□□ -0.46
CAPN1-208ENST00000527323 LINGO4Q6UY18 593 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 STK40Q8N2I9 435 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 FBXO22Q8NEZ5 403 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 TMEM169Q96HH4 297 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 TTPALQ9BTX7 342 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 DCSTAMPQ9H295 470 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 CWH43Q9H720 699 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 CCDC85CA6NKD9 419 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 EVPLLA8MZ36 301 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 SNPHO15079 494 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 TAPBPO15533 448 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 PGLSO95336 258 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 DBTP11182 482 aaKnown RBP12.17□□□□□ -0.46
CAPN1-208ENST00000527323 CTPS1P17812 591 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 NRIP1P48552 1158 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 RPS14P62263 151 aaKnown RBP12.17□□□□□ -0.46
CAPN1-208ENST00000527323 PHKG1Q16816 387 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 PLEKHG6Q3KR16 790 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 C9orf50Q5SZB4 431 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 ZNF362Q5T0B9 420 aaPredicted RBP12.17□□□□□ -0.46
CAPN1-208ENST00000527323 P3H2Q8IVL5 708 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 CLDN19Q8N6F1 224 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 ARMC5Q96C12 935 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 MIR1-1HGQ9H1L0 117 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 EPS8L2Q9H6S3 715 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 KRT84Q9NSB2 600 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 SAMHD1Q9Y3Z3 626 aaKnown RBP12.17□□□□□ -0.46
CAPN1-208ENST00000527323 PCDHB9Q9Y5E1 797 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 WDFY4Q6ZS81 3184 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 MANBAO00462 879 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 SLC25A14O95258 325 aaPredicted RBP12.17□□□□□ -0.46
CAPN1-208ENST00000527323 RHOCP08134 193 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 EPB42P16452 691 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 JUNDP17535 347 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 EPHA2P29317 976 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 SLC6A4P31645 630 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 PHC1P78364 1004 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 TAGLNQ01995 201 aaKnown RBP12.17□□□□□ -0.46
CAPN1-208ENST00000527323 GBX1Q14549 363 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 FAM151BQ6UXP7 276 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 OR52E4Q8NGH9 312 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 PMM1Q92871 262 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 FUBP3Q96I24 572 aaKnown RBP eCLIP12.17□□□□□ -0.46
CAPN1-208ENST00000527323 SLIRPQ9GZT3 109 aaKnown RBP12.17□□□□□ -0.46
CAPN1-208ENST00000527323 CCNB1IP1Q9NPC3 277 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 PRDM8Q9NQV8 689 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 SLCO3A1Q9UIG8 710 aa12.17□□□□□ -0.46
CAPN1-208ENST00000527323 SAMD4AQ9UPU9 718 aaKnown RBP12.17□□□□□ -0.46
CAPN1-208ENST00000527323 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-208ENST00000527323 NRG2O14511 850 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-208ENST00000527323 RFXANKO14593 260 aa12.16□□□□□ -0.46
CAPN1-208ENST00000527323 ZNF7P17097 686 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-208ENST00000527323 ZNF177Q13360 481 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-208ENST00000527323 CRIPAKQ8N1N5 446 aa12.16□□□□□ -0.46
CAPN1-208ENST00000527323 CPPED1Q9BRF8 314 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-208ENST00000527323 BOCQ9BWV1 1114 aa12.16□□□□□ -0.46
CAPN1-208ENST00000527323 CD244Q9BZW8 370 aa12.16□□□□□ -0.46
CAPN1-208ENST00000527323 SMG9Q9H0W8 520 aaKnown RBP12.16□□□□□ -0.46
CAPN1-208ENST00000527323 GKN1Q9NS71 199 aa12.16□□□□□ -0.46
CAPN1-208ENST00000527323 AFF4Q9UHB7 1163 aaKnown RBP12.16□□□□□ -0.46
CAPN1-208ENST00000527323 KDELR3O43731 214 aa12.16□□□□□ -0.46
CAPN1-208ENST00000527323 CD9P21926 228 aa12.16□□□□□ -0.46
CAPN1-208ENST00000527323 RCVRNP35243 200 aa12.16□□□□□ -0.46
CAPN1-208ENST00000527323 CDKN2CP42773 168 aa12.16□□□□□ -0.46
CAPN1-208ENST00000527323 NKX2-5P52952 324 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-208ENST00000527323 CACNG1Q06432 222 aa12.16□□□□□ -0.46
CAPN1-208ENST00000527323 ABHD18Q0P651 414 aa12.16□□□□□ -0.46
CAPN1-208ENST00000527323 DEPDC1Q5TB30 811 aa12.16□□□□□ -0.46
CAPN1-208ENST00000527323 ALG1LQ6GMV1 187 aa12.16□□□□□ -0.46
CAPN1-208ENST00000527323 UTS2BQ765I0 119 aa12.16□□□□□ -0.46
CAPN1-208ENST00000527323 VTCN1Q7Z7D3 282 aa12.16□□□□□ -0.46
CAPN1-208ENST00000527323 AKAP14Q86UN6 197 aa12.16□□□□□ -0.46
CAPN1-208ENST00000527323 SYTL1Q8IYJ3 562 aa12.16□□□□□ -0.46
CAPN1-208ENST00000527323 IGSF21Q96ID5 467 aa12.16□□□□□ -0.46
CAPN1-208ENST00000527323 KCNH6Q9H252 994 aa12.16□□□□□ -0.46
CAPN1-208ENST00000527323 EHD1Q9H4M9 534 aa12.16□□□□□ -0.46
CAPN1-208ENST00000527323 AMBNQ9NP70 447 aa12.16□□□□□ -0.46
CAPN1-208ENST00000527323 AASDHPPTQ9NRN7 309 aa12.16□□□□□ -0.46
CAPN1-208ENST00000527323 A0A096LPI6 279 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 MTMR11A4FU01 709 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 PSMD11O00231 422 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 AREL1O15033 823 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 AIREO43918 545 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 ACSL4O60488 711 aa12.15□□□□□ -0.46
CAPN1-208ENST00000527323 CCNDBP1O95273 360 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms