RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 ADAMTS6Q9UKP5 1117 aa16.71■□□□□ 0.27
CCS-204ENST00000526066 CFAP20Q9Y6A4 193 aaKnown RBP16.71■□□□□ 0.27
CCS-204ENST00000526066 ARHGEF33A8MVX0 844 aa16.7■□□□□ 0.26
CCS-204ENST00000526066 TYROBPO43914 113 aa16.7■□□□□ 0.26
CCS-204ENST00000526066 KERAO60938 352 aa16.7■□□□□ 0.26
CCS-204ENST00000526066 SYF2O95926 243 aaKnown RBP16.7■□□□□ 0.26
CCS-204ENST00000526066 VIPP01282 170 aa16.7■□□□□ 0.26
CCS-204ENST00000526066 FGF3P11487 239 aaPredicted RBP16.7■□□□□ 0.26
CCS-204ENST00000526066 LIFP15018 202 aa16.7■□□□□ 0.26
CCS-204ENST00000526066 CREB1P16220 341 aa16.7■□□□□ 0.26
CCS-204ENST00000526066 MAP4P27816 1152 aaKnown RBP16.7■□□□□ 0.26
CCS-204ENST00000526066 AP1S2P56377 157 aa16.7■□□□□ 0.26
CCS-204ENST00000526066 OR4D1Q15615 310 aa16.7■□□□□ 0.26
CCS-204ENST00000526066 TTMPQ5BVD1 217 aa16.7■□□□□ 0.26
CCS-204ENST00000526066 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.7■□□□□ 0.26
CCS-204ENST00000526066 DUS1LQ6P1R4 473 aaKnown RBP16.7■□□□□ 0.26
CCS-204ENST00000526066 CDHR3Q6ZTQ4 885 aa16.7■□□□□ 0.26
CCS-204ENST00000526066 TRIM48Q8IWZ4 208 aa16.7■□□□□ 0.26
CCS-204ENST00000526066 OR5AR1Q8NGP9 310 aa16.7■□□□□ 0.26
CCS-204ENST00000526066 C9orf43Q8TAL5 461 aaPredicted RBP16.7■□□□□ 0.26
CCS-204ENST00000526066 MCOLN3Q8TDD5 553 aa16.7■□□□□ 0.26
CCS-204ENST00000526066 RAD51AP1Q96B01 352 aa16.7■□□□□ 0.26
CCS-204ENST00000526066 AHCYL2Q96HN2 611 aaKnown RBP16.7■□□□□ 0.26
CCS-204ENST00000526066 FERD3LQ96RJ6 166 aa16.7■□□□□ 0.26
CCS-204ENST00000526066 ATOH8Q96SQ7 321 aa16.7■□□□□ 0.26
CCS-204ENST00000526066 EFHD1Q9BUP0 239 aa16.7■□□□□ 0.26
CCS-204ENST00000526066 TRIM54Q9BYV2 358 aa16.7■□□□□ 0.26
CCS-204ENST00000526066 UNKQ9C0B0 810 aaKnown RBP16.7■□□□□ 0.26
CCS-204ENST00000526066 STN1Q9H668 368 aaKnown RBP16.7■□□□□ 0.26
CCS-204ENST00000526066 ALG9Q9H6U8 611 aa16.7■□□□□ 0.26
CCS-204ENST00000526066 KIR3DX1Q9H7L2 352 aa16.7■□□□□ 0.26
CCS-204ENST00000526066 UCK1Q9HA47 277 aa16.7■□□□□ 0.26
CCS-204ENST00000526066 MED4Q9NPJ6 270 aa16.7■□□□□ 0.26
CCS-204ENST00000526066 KCNK4Q9NYG8 393 aa16.7■□□□□ 0.26
CCS-204ENST00000526066 TMEM216Q9P0N5 145 aa16.7■□□□□ 0.26
CCS-204ENST00000526066 PDE10AQ9Y233 779 aa16.7■□□□□ 0.26
CCS-204ENST00000526066 OARD1Q9Y530 152 aa16.7■□□□□ 0.26
CCS-204ENST00000526066 MYO1CO00159 1063 aa16.69■□□□□ 0.26
CCS-204ENST00000526066 PRPF4O43172 522 aaKnown RBP eCLIP16.69■□□□□ 0.267e-7■■■■□ 22.1
CCS-204ENST00000526066 KDM1AO60341 852 aa16.69■□□□□ 0.26
CCS-204ENST00000526066 CASRP41180 1078 aa16.69■□□□□ 0.26
CCS-204ENST00000526066 GLRBP48167 497 aa16.69■□□□□ 0.26
CCS-204ENST00000526066 CDKL1Q00532 357 aa16.69■□□□□ 0.26
CCS-204ENST00000526066 GPS2Q13227 327 aa16.69■□□□□ 0.26
CCS-204ENST00000526066 KRT33BQ14525 404 aa16.69■□□□□ 0.26
CCS-204ENST00000526066 NR1D2Q14995 579 aa16.69■□□□□ 0.26
CCS-204ENST00000526066 PHKG1Q16816 387 aa16.69■□□□□ 0.26
CCS-204ENST00000526066 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.69■□□□□ 0.26
CCS-204ENST00000526066 CDKL4Q5MAI5 379 aa16.69■□□□□ 0.26
CCS-204ENST00000526066 GPSM1Q86YR5 675 aa16.69■□□□□ 0.26
CCS-204ENST00000526066 PHC3Q8NDX5 983 aa16.69■□□□□ 0.26
CCS-204ENST00000526066 SH3KBP1Q96B97 665 aa16.69■□□□□ 0.26
CCS-204ENST00000526066 TEFMQ96QE5 360 aaKnown RBP16.69■□□□□ 0.26
CCS-204ENST00000526066 IQCGQ9H095 443 aaKnown RBP16.69■□□□□ 0.26
CCS-204ENST00000526066 EPN3Q9H201 632 aa16.69■□□□□ 0.26
CCS-204ENST00000526066 MRPL46Q9H2W6 279 aaKnown RBP16.69■□□□□ 0.26
CCS-204ENST00000526066 GPN2Q9H9Y4 310 aaPredicted RBP16.69■□□□□ 0.26
CCS-204ENST00000526066 SLC40A1Q9NP59 571 aa16.69■□□□□ 0.26
CCS-204ENST00000526066 PLLPQ9Y342 182 aa16.69■□□□□ 0.26
CCS-204ENST00000526066 TRBV23OR9-2A0A075B6M9 112 aa16.68■□□□□ 0.26
CCS-204ENST00000526066 SYCE1LA8MT33 242 aa16.68■□□□□ 0.26
CCS-204ENST00000526066 RAD1O60671 282 aa16.68■□□□□ 0.26
CCS-204ENST00000526066 HIST1H2AGP0C0S8 130 aaPredicted RBP16.68■□□□□ 0.26
CCS-204ENST00000526066 HIST1H2ADP20671 130 aa16.68■□□□□ 0.26
CCS-204ENST00000526066 CD1CP29017 333 aa16.68■□□□□ 0.26
CCS-204ENST00000526066 BDKRB1P46663 353 aa16.68■□□□□ 0.26
CCS-204ENST00000526066 SLC18A1P54219 525 aa16.68■□□□□ 0.26
CCS-204ENST00000526066 GPLD1P80108 840 aa16.68■□□□□ 0.26
CCS-204ENST00000526066 HHEXQ03014 270 aa16.68■□□□□ 0.26
CCS-204ENST00000526066 TGFBIQ15582 683 aa16.68■□□□□ 0.26
CCS-204ENST00000526066 CCDC153Q494R4 210 aa16.68■□□□□ 0.26
CCS-204ENST00000526066 HSP90B2PQ58FF3 399 aa16.68■□□□□ 0.26
CCS-204ENST00000526066 FRA10AC1Q70Z53 315 aa16.68■□□□□ 0.26
CCS-204ENST00000526066 TMEM151AQ8N4L1 468 aa16.68■□□□□ 0.26
CCS-204ENST00000526066 OR9A1PQ8NGU1 263 aa16.68■□□□□ 0.26
CCS-204ENST00000526066 SCYL1Q96KG9 808 aa16.68■□□□□ 0.26
CCS-204ENST00000526066 HIST1H2AHQ96KK5 128 aa16.68■□□□□ 0.26
CCS-204ENST00000526066 CCDC138Q96M89 665 aa16.68■□□□□ 0.26
CCS-204ENST00000526066 HIST1H2AJQ99878 128 aa16.68■□□□□ 0.26
CCS-204ENST00000526066 H2AFJQ9BTM1 129 aa16.68■□□□□ 0.26
CCS-204ENST00000526066 HGH1Q9BTY7 390 aa16.68■□□□□ 0.26
CCS-204ENST00000526066 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.68■□□□□ 0.26
CCS-204ENST00000526066 XPR1Q9UBH6 696 aa16.68■□□□□ 0.26
CCS-204ENST00000526066 EMCNQ9ULC0 261 aa16.68■□□□□ 0.26
CCS-204ENST00000526066 RNF112Q9ULX5 631 aa16.68■□□□□ 0.26
CCS-204ENST00000526066 TMCO1Q9UM00 188 aa16.68■□□□□ 0.26
CCS-204ENST00000526066 B3GALT1Q9Y5Z6 326 aa16.68■□□□□ 0.26
CCS-204ENST00000526066 PABPN1LA6NDY0 278 aaKnown RBP16.67■□□□□ 0.26
CCS-204ENST00000526066 EFCAB7A8K855 629 aa16.67■□□□□ 0.26
CCS-204ENST00000526066 B4E171 279 aa16.67■□□□□ 0.26
CCS-204ENST00000526066 TARM1B6A8C7 271 aa16.67■□□□□ 0.26
CCS-204ENST00000526066 TM9SF1O15321 606 aa16.67■□□□□ 0.26
CCS-204ENST00000526066 PLIN3O60664 434 aa16.67■□□□□ 0.26
CCS-204ENST00000526066 SPAG7O75391 227 aa16.67■□□□□ 0.26
CCS-204ENST00000526066 PROCP04070 461 aa16.67■□□□□ 0.26
CCS-204ENST00000526066 GP1BBP13224 206 aa16.67■□□□□ 0.26
CCS-204ENST00000526066 TSPAN7P41732 249 aa16.67■□□□□ 0.26
CCS-204ENST00000526066 KCNC1P48547 511 aa16.67■□□□□ 0.26
CCS-204ENST00000526066 MC1RQ01726 317 aa16.67■□□□□ 0.26
CCS-204ENST00000526066 GRB7Q14451 532 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms