RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 WDR45BQ5MNZ6 344 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 PPM1LQ5SGD2 360 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 CYP4A22Q5TCH4 519 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 SERTAD4-AS1Q5TG53 156 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 LYSMD4Q5XG99 296 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 TXNDC8Q6A555 127 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 SLC35E4Q6ICL7 350 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 FAM53AQ6NSI3 398 aaPredicted RBP1.56□□□□□ -2.16
CD44-212ENST00000524922 FUT10Q6P4F1 479 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 INO80CQ6PI98 192 aaPredicted RBP1.56□□□□□ -2.16
CD44-212ENST00000524922 SUSD1Q6UWL2 747 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 SPNS3Q6ZMD2 512 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 GET4Q7L5D6 327 aaPredicted RBP1.56□□□□□ -2.16
CD44-212ENST00000524922 TAOK1Q7L7X3 1001 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 LINGO2Q7L985 606 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 KBTBD6Q86V97 674 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 TMEM173Q86WV6 379 aaPredicted RBP1.56□□□□□ -2.16
CD44-212ENST00000524922 ERICH1Q86X53 443 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 IQCA1Q86XH1 822 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 NRROSQ86YC3 692 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 TMTC1Q8IUR5 882 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 NAXDQ8IW45 347 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 DHX40Q8IX18 779 aaKnown RBP1.56□□□□□ -2.16
CD44-212ENST00000524922 RNF113BQ8IZP6 322 aaKnown RBP1.56□□□□□ -2.16
CD44-212ENST00000524922 ELMOD1Q8N336 334 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 TMEM57Q8N5G2 664 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 ENAHQ8N8S7 591 aaPredicted RBP1.56□□□□□ -2.16
CD44-212ENST00000524922 SCCPDHQ8NBX0 429 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 ADAD2Q8NCV1 583 aaKnown RBP1.56□□□□□ -2.16
CD44-212ENST00000524922 OR10V1Q8NGI7 309 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 OR5R1Q8NH85 324 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 SPATA18Q8TC71 538 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 C2orf15Q8WU43 125 aaKnown RBP1.56□□□□□ -2.16
CD44-212ENST00000524922 DNAJB3Q8WWF6 145 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 FCAMRQ8WWV6 532 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 CRYGNQ8WXF5 182 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 ESR2Q92731 530 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 SH3KBP1Q96B97 665 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 FBXL8Q96CD0 374 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 HDAC11Q96DB2 347 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 MOCOSQ96EN8 888 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 PPP1R13BQ96KQ4 1090 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 MTMR9Q96QG7 549 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 TAAR1Q96RJ0 339 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 ATOH8Q96SQ7 321 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 TMEM47Q9BQJ4 181 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 SDF4Q9BRK5 362 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 SPZ1Q9BXG8 430 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 GCOM2Q9BZD3 368 aaPredicted RBP1.56□□□□□ -2.16
CD44-212ENST00000524922 TKTL2Q9H0I9 626 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 TMEM206Q9H813 350 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 HEBP1Q9NRV9 189 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 SNTG1Q9NSN8 517 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 TMEM160Q9NX00 188 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 MARCH5Q9NX47 278 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 KIF17Q9P2E2 1029 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 TAGLN3Q9UI15 199 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 ADAM28Q9UKQ2 775 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 MMP17Q9ULZ9 603 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 CARD8Q9Y2G2 431 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 AMDHD2Q9Y303 409 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 MTF2Q9Y483 593 aaPredicted RBP1.56□□□□□ -2.16
CD44-212ENST00000524922 SMAD5-AS1Q9Y6J3 95 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 NOTCH1P46531 2555 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 ICE1Q9Y2F5 2266 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 LAMA4Q16363 1823 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 PLXNA4Q9HCM2 1894 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 CELSR2Q9HCU4 2923 aa1.56□□□□□ -2.16
CD44-212ENST00000524922 ATG2BQ96BY7 2078 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 CSMD2Q7Z408 3487 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 TRABD2BA6NFA1 517 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 TMEM202A6NGA9 273 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 AKR1B15C9JRZ8 316 aaPredicted RBP1.55□□□□□ -2.16
CD44-212ENST00000524922 BLOC1S5-TXNDC5H3BN57 136 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 NR5A2O00482 541 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 MEIS2O14770 477 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 KLK10O43240 276 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 PRKAB2O43741 272 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 PRKNO60260 465 aaPredicted RBP1.55□□□□□ -2.16
CD44-212ENST00000524922 SURF6O75683 361 aaKnown RBP1.55□□□□□ -2.16
CD44-212ENST00000524922 TCEA3O75764 348 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 IGHV4-39P01824 125 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 CD48P09326 243 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 PCNAP12004 261 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 SLC2A4P14672 509 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 AZU1P20160 251 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 CDC25CP30307 473 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 OXTRP30559 389 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 GNAQP50148 359 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 LUMP51884 338 aaPredicted RBP1.55□□□□□ -2.16
CD44-212ENST00000524922 RAD23BP54727 409 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 DSCR10P59022 87 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 KRTAP10-8P60410 259 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 PTENP60484 403 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 CREB5Q02930 508 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 NCBP1Q09161 790 aaKnown RBP1.55□□□□□ -2.16
CD44-212ENST00000524922 OVGP1Q12889 678 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 MORC3Q14149 939 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 EFR3AQ14156 821 aa1.55□□□□□ -2.16
CD44-212ENST00000524922 DMC1Q14565 340 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms