RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 ZNF304Q9HCX3 659 aa18.77■□□□□ 0.6
PABPC1-215ENST00000520804 HOMER3Q9NSC5 361 aa18.77■□□□□ 0.6
PABPC1-215ENST00000520804 ZC3H7BQ9UGR2 993 aaKnown RBP18.77■□□□□ 0.6
PABPC1-215ENST00000520804 TSR3Q9UJK0 312 aaKnown RBP18.77■□□□□ 0.6
PABPC1-215ENST00000520804 CRYL1Q9Y2S2 319 aa18.77■□□□□ 0.6
PABPC1-215ENST00000520804 CSAG2Q9Y5P2 127 aa18.77■□□□□ 0.6
PABPC1-215ENST00000520804 SPTBN1Q01082 2364 aaKnown RBP18.76■□□□□ 0.59
PABPC1-215ENST00000520804 OR2A25A4D2G3 310 aa18.76■□□□□ 0.59
PABPC1-215ENST00000520804 CHRM3P20309 590 aa18.76■□□□□ 0.59
PABPC1-215ENST00000520804 OGNP20774 298 aaKnown RBP18.76■□□□□ 0.59
PABPC1-215ENST00000520804 CMPK1P30085 196 aa18.76■□□□□ 0.59
PABPC1-215ENST00000520804 NAA25Q14CX7 972 aa18.76■□□□□ 0.59
PABPC1-215ENST00000520804 TUBB8Q3ZCM7 444 aa18.76■□□□□ 0.59
PABPC1-215ENST00000520804 ACSBG2Q5FVE4 666 aa18.76■□□□□ 0.59
PABPC1-215ENST00000520804 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.76■□□□□ 0.59
PABPC1-215ENST00000520804 AGAP7PQ5VUJ5 663 aa18.76■□□□□ 0.59
PABPC1-215ENST00000520804 IRAK1BP1Q5VVH5 260 aa18.76■□□□□ 0.59
PABPC1-215ENST00000520804 ARMC3Q5W041 872 aa18.76■□□□□ 0.59
PABPC1-215ENST00000520804 OR11G2Q8NGC1 345 aa18.76■□□□□ 0.59
PABPC1-215ENST00000520804 OR9A1PQ8NGU1 263 aa18.76■□□□□ 0.59
PABPC1-215ENST00000520804 PPP4R1Q8TF05 950 aa18.76■□□□□ 0.59
PABPC1-215ENST00000520804 FAM136AQ96C01 138 aa18.76■□□□□ 0.59
PABPC1-215ENST00000520804 VPS50Q96JG6 964 aa18.76■□□□□ 0.59
PABPC1-215ENST00000520804 AGAP4Q96P64 663 aa18.76■□□□□ 0.59
PABPC1-215ENST00000520804 ZFYVE21Q9BQ24 234 aa18.76■□□□□ 0.59
PABPC1-215ENST00000520804 CRB3Q9BUF7 120 aa18.76■□□□□ 0.59
PABPC1-215ENST00000520804 GALPQ9UBC7 116 aa18.76■□□□□ 0.59
PABPC1-215ENST00000520804 NTNG1Q9Y2I2 539 aa18.76■□□□□ 0.59
PABPC1-215ENST00000520804 PRRC2CQ9Y520 2896 aaKnown RBP18.75■□□□□ 0.59
PABPC1-215ENST00000520804 ANKUB1A6NFN9 424 aa18.75■□□□□ 0.59
PABPC1-215ENST00000520804 ARHGEF33A8MVX0 844 aa18.75■□□□□ 0.59
PABPC1-215ENST00000520804 MYO1CO00159 1063 aa18.75■□□□□ 0.59
PABPC1-215ENST00000520804 CEP104O60308 925 aa18.75■□□□□ 0.59
PABPC1-215ENST00000520804 EIF2S1P05198 315 aaKnown RBP18.75■□□□□ 0.59
PABPC1-215ENST00000520804 CCDC175P0C221 793 aa18.75■□□□□ 0.59
PABPC1-215ENST00000520804 MAGEA6P43360 314 aa18.75■□□□□ 0.59
PABPC1-215ENST00000520804 CARSP49589 748 aaKnown RBP18.75■□□□□ 0.59
PABPC1-215ENST00000520804 KCNJ11Q14654 390 aa18.75■□□□□ 0.59
PABPC1-215ENST00000520804 TRIP13Q15645 432 aaPredicted RBP18.75■□□□□ 0.59
PABPC1-215ENST00000520804 HIF1AQ16665 826 aa18.75■□□□□ 0.59
PABPC1-215ENST00000520804 ANKRD20A4Q4UJ75 823 aa18.75■□□□□ 0.59
PABPC1-215ENST00000520804 FBXO42Q6P3S6 717 aa18.75■□□□□ 0.59
PABPC1-215ENST00000520804 CILP2Q8IUL8 1156 aa18.75■□□□□ 0.59
PABPC1-215ENST00000520804 PARP9Q8IXQ6 854 aa18.75■□□□□ 0.59
PABPC1-215ENST00000520804 PRELID2Q8N945 189 aa18.75■□□□□ 0.59
PABPC1-215ENST00000520804 STT3BQ8TCJ2 826 aa18.75■□□□□ 0.59
PABPC1-215ENST00000520804 DPH7Q9BTV6 452 aa18.75■□□□□ 0.59
PABPC1-215ENST00000520804 ACAT2Q9BWD1 397 aa18.75■□□□□ 0.59
PABPC1-215ENST00000520804 LHPPQ9H008 270 aa18.75■□□□□ 0.59
PABPC1-215ENST00000520804 ZNF282Q9UDV7 671 aaPredicted RBP18.75■□□□□ 0.59
PABPC1-215ENST00000520804 ERRFI1Q9UJM3 462 aaPredicted RBP18.75■□□□□ 0.59
PABPC1-215ENST00000520804 NOVA2Q9UNW9 492 aaKnown RBP18.75■□□□□ 0.59
PABPC1-215ENST00000520804 DOCK10Q96BY6 2186 aa18.75■□□□□ 0.59
PABPC1-215ENST00000520804 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.74■□□□□ 0.59
PABPC1-215ENST00000520804 A1L4Q6 167 aa18.74■□□□□ 0.59
PABPC1-215ENST00000520804 WIPF3A6NGB9 483 aa18.74■□□□□ 0.59
PABPC1-215ENST00000520804 AVILO75366 819 aa18.74■□□□□ 0.59
PABPC1-215ENST00000520804 PSIP1O75475 530 aaKnown RBP18.74■□□□□ 0.59
PABPC1-215ENST00000520804 ZGLP1P0C6A0 271 aa18.74■□□□□ 0.59
PABPC1-215ENST00000520804 PKMP14618 531 aaKnown RBP18.74■□□□□ 0.59
PABPC1-215ENST00000520804 PAMP19021 973 aa18.74■□□□□ 0.59
PABPC1-215ENST00000520804 CXCR5P32302 372 aa18.74■□□□□ 0.59
PABPC1-215ENST00000520804 TERF1P54274 439 aa18.74■□□□□ 0.59
PABPC1-215ENST00000520804 SARNPP82979 210 aaKnown RBP18.74■□□□□ 0.59
PABPC1-215ENST00000520804 OCA2Q04671 838 aa18.74■□□□□ 0.59
PABPC1-215ENST00000520804 KLC1Q07866 573 aa18.74■□□□□ 0.59
PABPC1-215ENST00000520804 ARHGAP19Q14CB8 494 aa18.74■□□□□ 0.59
PABPC1-215ENST00000520804 MUM1Q2TAK8 710 aa18.74■□□□□ 0.59
PABPC1-215ENST00000520804 PRTGQ2VWP7 1150 aa18.74■□□□□ 0.59
PABPC1-215ENST00000520804 KLHL38Q2WGJ6 581 aa18.74■□□□□ 0.59
PABPC1-215ENST00000520804 NEPROQ6NW34 567 aa18.74■□□□□ 0.59
PABPC1-215ENST00000520804 CENPUQ71F23 418 aa18.74■□□□□ 0.59
PABPC1-215ENST00000520804 TRIM58Q8NG06 486 aa18.74■□□□□ 0.59
PABPC1-215ENST00000520804 SMPDL3AQ92484 453 aa18.74■□□□□ 0.59
PABPC1-215ENST00000520804 MIEF2Q96C03 454 aa18.74■□□□□ 0.59
PABPC1-215ENST00000520804 C10orf90Q96M02 699 aa18.74■□□□□ 0.59
PABPC1-215ENST00000520804 FAM114A2Q9NRY5 505 aa18.74■□□□□ 0.59
PABPC1-215ENST00000520804 INTS10Q9NVR2 710 aaKnown RBP18.74■□□□□ 0.59
PABPC1-215ENST00000520804 STOX2Q9P2F5 926 aaPredicted RBP18.74■□□□□ 0.59
PABPC1-215ENST00000520804 VPS9D1Q9Y2B5 631 aa18.74■□□□□ 0.59
PABPC1-215ENST00000520804 HIVEP3Q5T1R4 2406 aa18.74■□□□□ 0.59
PABPC1-215ENST00000520804 IGLV3-12A0A075B6K2 115 aa18.73■□□□□ 0.59
PABPC1-215ENST00000520804 E5RI56 91 aa18.73■□□□□ 0.59
PABPC1-215ENST00000520804 H0YGG7 62 aa18.73■□□□□ 0.59
PABPC1-215ENST00000520804 PHF2O75151 1096 aa18.73■□□□□ 0.59
PABPC1-215ENST00000520804 ERVK-10P10266 1014 aa18.73■□□□□ 0.59
PABPC1-215ENST00000520804 RPA3P35244 121 aaPredicted RBP18.73■□□□□ 0.59
PABPC1-215ENST00000520804 VPS41P49754 854 aa18.73■□□□□ 0.59
PABPC1-215ENST00000520804 EMP3P54852 163 aa18.73■□□□□ 0.59
PABPC1-215ENST00000520804 ARF3P61204 181 aaPredicted RBP18.73■□□□□ 0.59
PABPC1-215ENST00000520804 Q0VFX4 171 aa18.73■□□□□ 0.59
PABPC1-215ENST00000520804 GPS1Q13098 491 aa18.73■□□□□ 0.59
PABPC1-215ENST00000520804 ELOAQ14241 798 aaKnown RBP18.73■□□□□ 0.59
PABPC1-215ENST00000520804 SUSD1Q6UWL2 747 aa18.73■□□□□ 0.59
PABPC1-215ENST00000520804 CAND1Q86VP6 1230 aaKnown RBP18.73■□□□□ 0.59
PABPC1-215ENST00000520804 DNAJB14Q8TBM8 379 aa18.73■□□□□ 0.59
PABPC1-215ENST00000520804 COG1Q8WTW3 980 aa18.73■□□□□ 0.59
PABPC1-215ENST00000520804 THOC3Q96J01 351 aaKnown RBP18.73■□□□□ 0.59
PABPC1-215ENST00000520804 PLCD4Q9BRC7 762 aa18.73■□□□□ 0.59
PABPC1-215ENST00000520804 MESP1Q9BRJ9 268 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms