RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 PUM1Q14671 1186 aaKnown RBP eCLIP8.41□□□□□ -1.06
SHPRH-208ENST00000520752 NCF4Q15080 339 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 TESK1Q15569 626 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 EPC2Q52LR7 807 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 TFDP3Q5H9I0 405 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 TCTE1Q5JU00 501 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 DGKKQ5KSL6 1271 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 C3orf33Q6P1S2 294 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 CHST15Q7LFX5 561 aaPredicted RBP8.41□□□□□ -1.06
SHPRH-208ENST00000520752 POLNQ7Z5Q5 900 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 FAM160B2Q86V87 743 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 C10orf107Q8IVU9 208 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 ZZZ3Q8IYH5 903 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 NLGN4XQ8N0W4 816 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 SVOPLQ8N434 492 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 KLHL36Q8N4N3 616 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 MINDY1Q8N5J2 469 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 CDYL2Q8N8U2 506 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 TTC29Q8NA56 475 aaPredicted RBP8.41□□□□□ -1.06
SHPRH-208ENST00000520752 TMEM145Q8NBT3 493 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 OR1M1Q8NGA1 313 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 OR52K2Q8NGK3 314 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 ELP5Q8TE02 316 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 GTF3AQ92664 365 aaKnown RBP8.41□□□□□ -1.06
SHPRH-208ENST00000520752 KISS1RQ969F8 398 aaPredicted RBP8.41□□□□□ -1.06
SHPRH-208ENST00000520752 REPS1Q96D71 796 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 TEPSINQ96N21 525 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 WDFY2Q96P53 400 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 TBCDQ9BTW9 1192 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 PDCD10Q9BUL8 212 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 IL22Q9GZX6 179 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 PCDHAC1Q9H158 963 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 LRRC4Q9HBW1 653 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 EQTNQ9NQ60 294 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 CASS4Q9NQ75 786 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 GPRC5CQ9NQ84 441 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 ENTPD7Q9NQZ7 604 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 GSN-AS1Q9NRJ2 163 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 DNAJC11Q9NVH1 559 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 TMEM260Q9NX78 707 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 ERVK-18Q9QC07 812 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 CLEC4AQ9UMR7 237 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 ABCG2Q9UNQ0 655 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 PSAT1Q9Y617 370 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 AP1M2Q9Y6Q5 423 aa8.41□□□□□ -1.06
SHPRH-208ENST00000520752 NAV1Q8NEY1 1877 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 TRBV23OR9-2A0A075B6M9 112 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 hCG_1818297A0A087WSY0 165 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 TRBV23-1A0A0A0MS06 115 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 A8MV72 311 aaPredicted RBP8.4□□□□□ -1.06
SHPRH-208ENST00000520752 B4DXG7 233 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 KCNK1O00180 336 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 MRASO14807 208 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 MYL12BO14950 172 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 KIAA0355O15063 1070 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 SLC16A6O15403 523 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 CA12O43570 354 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 NRP2O60462 931 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 MPOP05164 745 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 ADRB1P08588 477 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 LTA4HP09960 611 aaKnown RBP8.4□□□□□ -1.06
SHPRH-208ENST00000520752 PRF1P14222 555 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 MYL12AP19105 171 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 ATP6V1B2P21281 511 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 MSX2P35548 267 aaPredicted RBP8.4□□□□□ -1.06
SHPRH-208ENST00000520752 EIF2S3P41091 472 aaKnown RBP8.4□□□□□ -1.06
SHPRH-208ENST00000520752 CCR10P46092 362 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 GPR143P51810 404 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 SLC12A3P55017 1021 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 KCNK10P57789 538 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 NCS1P62166 190 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 RPS6P62753 249 aaKnown RBP8.4□□□□□ -1.06
SHPRH-208ENST00000520752 TFAMQ00059 246 aaKnown RBP8.4□□□□□ -1.06
SHPRH-208ENST00000520752 HSF2Q03933 536 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 PUDPQ08623 228 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 FGL1Q08830 312 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 SLAMF1Q13291 335 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 MAMLD1Q13495 774 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 SEMA5AQ13591 1074 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 PCBP1Q15365 356 aaKnown RBP eCLIP8.4□□□□□ -1.06
SHPRH-208ENST00000520752 GPR19Q15760 415 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 LBHQ53QV2 105 aaPredicted RBP8.4□□□□□ -1.06
SHPRH-208ENST00000520752 ANKRD22Q5VYY1 191 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 FAM160B1Q5W0V3 765 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 ARHGAP17Q68EM7 881 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 REP15Q6BDI9 236 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 MZT2BQ6NZ67 158 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 PGAP1Q75T13 922 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 RAB11FIP2Q7L804 512 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 BNIPLQ7Z465 357 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 SNX20Q7Z614 316 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 PTAR1Q7Z6K3 402 aaPredicted RBP8.4□□□□□ -1.06
SHPRH-208ENST00000520752 SLC9B2Q86UD5 537 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 LHFPL3Q86UP9 236 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 PROSER1Q86XN7 944 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 KRT73Q86Y46 540 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 PTRH1Q86Y79 214 aaKnown RBP8.4□□□□□ -1.06
SHPRH-208ENST00000520752 SPPL2CQ8IUH8 684 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 ABI1Q8IZP0 508 aa8.4□□□□□ -1.06
SHPRH-208ENST00000520752 KRT78Q8N1N4 520 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms