RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 TRIM58Q8NG06 486 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 OR9A1PQ8NGU1 263 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 MAGEC3Q8TD91 643 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 SSC4DQ8WTU2 575 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 FAM136AQ96C01 138 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 TRIM56Q9BRZ2 755 aaKnown RBP11.89□□□□□ -0.51
CSMD1-205ENST00000519623 SPATA7Q9P0W8 599 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 STOX2Q9P2F5 926 aaPredicted RBP11.89□□□□□ -0.51
CSMD1-205ENST00000519623 CTSFQ9UBX1 484 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 ZC3H7BQ9UGR2 993 aaKnown RBP11.89□□□□□ -0.51
CSMD1-205ENST00000519623 CDC23Q9UJX2 597 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 MAU2Q9Y6X3 613 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 NOTCH2Q04721 2471 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 TEX15Q9BXT5 2789 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 UNC79Q9P2D8 2635 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 ARHGEF33A8MVX0 844 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 PSIP1O75475 530 aaKnown RBP11.88□□□□□ -0.51
CSMD1-205ENST00000519623 PKMP14618 531 aaKnown RBP11.88□□□□□ -0.51
CSMD1-205ENST00000519623 OGNP20774 298 aaKnown RBP11.88□□□□□ -0.51
CSMD1-205ENST00000519623 ITGA3P26006 1051 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 CLCN7P51798 805 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 TERF1P54274 439 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 GPS1Q13098 491 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 PRTGQ2VWP7 1150 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 KLHL38Q2WGJ6 581 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 ANKRD20A4Q4UJ75 823 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 HIST2H2BCQ6DN03 193 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 TTC27Q6P3X3 843 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 IGFL2Q6UWQ7 119 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 RNF44Q7L0R7 432 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 CUZD1Q86UP6 607 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 SPNS2Q8IVW8 549 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 OR11G2Q8NGC1 345 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 PRR7Q8TB68 274 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 SLC30A3Q99726 388 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 MESP1Q9BRJ9 268 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 DPH7Q9BTV6 452 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 ACAT2Q9BWD1 397 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 SOX17Q9H6I2 414 aaPredicted RBP11.88□□□□□ -0.51
CSMD1-205ENST00000519623 SYNPO2LQ9H987 977 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 ZNF304Q9HCX3 659 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 SEMA3GQ9NS98 782 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 CUEDC1Q9NWM3 386 aaPredicted RBP11.88□□□□□ -0.51
CSMD1-205ENST00000519623 MAP10Q9P2G4 905 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 PLEKHB1Q9UF11 243 aaPredicted RBP11.88□□□□□ -0.51
CSMD1-205ENST00000519623 TSR3Q9UJK0 312 aaKnown RBP11.88□□□□□ -0.51
CSMD1-205ENST00000519623 NXT1Q9UKK6 140 aaKnown RBP11.88□□□□□ -0.51
CSMD1-205ENST00000519623 MED16Q9Y2X0 877 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 NEU2Q9Y3R4 380 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 CSAG2Q9Y5P2 127 aa11.88□□□□□ -0.51
CSMD1-205ENST00000519623 DOPEY1Q5JWR5 2465 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 IGKV1-8A0A0C4DH67 115 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 FAM237BA0A1B0GVD1 139 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 MAGEB16A2A368 324 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 WIPF3A6NGB9 483 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 SDR42E2A6NKP2 422 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 H0YGG7 62 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 MYO1CO00159 1063 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 PFDN6O15212 129 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 KRT14P02533 472 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 EIF2S1P05198 315 aaKnown RBP11.87□□□□□ -0.51
CSMD1-205ENST00000519623 MLNP12872 115 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 VPS41P49754 854 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 ARF3P61204 181 aaPredicted RBP11.87□□□□□ -0.51
CSMD1-205ENST00000519623 SARNPP82979 210 aaKnown RBP11.87□□□□□ -0.51
CSMD1-205ENST00000519623 CCZ1BP86790 482 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 CCZ1P86791 482 aaPredicted RBP11.87□□□□□ -0.51
CSMD1-205ENST00000519623 Q0VFX4 171 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 ARHGAP19Q14CB8 494 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 NR6A1Q15406 480 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 HIF1AQ16665 826 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 C4orf17Q53FE4 359 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 ATG9BQ674R7 924 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 PRMT9Q6P2P2 845 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 ZNF549Q6P9A3 640 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 SUSD1Q6UWL2 747 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 LAPTM4BQ86VI4 370 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 PAQR7Q86WK9 346 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 PARP9Q8IXQ6 854 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 MCUQ8NE86 351 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 STT3BQ8TCJ2 826 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 SMPDL3AQ92484 453 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 TM9SF4Q92544 642 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 C10orf90Q96M02 699 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 PKP4Q99569 1192 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 ZFYVE21Q9BQ24 234 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 PLCD4Q9BRC7 762 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 SLC29A3Q9BZD2 475 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 INTS10Q9NVR2 710 aaKnown RBP11.87□□□□□ -0.51
CSMD1-205ENST00000519623 NTNG1Q9Y2I2 539 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 PCDHGA10Q9Y5H3 936 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 COPG1Q9Y678 874 aaKnown RBP11.87□□□□□ -0.51
CSMD1-205ENST00000519623 FAM169AQ9Y6X4 670 aa11.87□□□□□ -0.51
CSMD1-205ENST00000519623 CENPEQ02224 2701 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 IGLV3-12A0A075B6K2 115 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 ZCWPW2A0A1B0GU75 182 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 F7P08709 466 aaPredicted RBP11.86□□□□□ -0.51
CSMD1-205ENST00000519623 ZGLP1P0C6A0 271 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 PAMP19021 973 aa11.86□□□□□ -0.51
CSMD1-205ENST00000519623 CMPK1P30085 196 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms