RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 GPX6P59796 221 aa17.91■□□□□ 0.46
FAM49B-208ENST00000518344 SP140Q13342 867 aa17.91■□□□□ 0.46
FAM49B-208ENST00000518344 ICE2Q659A1 982 aa17.91■□□□□ 0.46
FAM49B-208ENST00000518344 ZNF517Q6ZMY9 492 aaPredicted RBP17.91■□□□□ 0.46
FAM49B-208ENST00000518344 CTAGE6Q86UF2 777 aa17.91■□□□□ 0.46
FAM49B-208ENST00000518344 CTAGE4Q8IX94 777 aa17.91■□□□□ 0.46
FAM49B-208ENST00000518344 MMGT1Q8N4V1 131 aa17.91■□□□□ 0.46
FAM49B-208ENST00000518344 ENDOVQ8N8Q3 282 aaKnown RBP17.91■□□□□ 0.46
FAM49B-208ENST00000518344 NOA1Q8NC60 698 aaKnown RBP17.91■□□□□ 0.46
FAM49B-208ENST00000518344 ALKBH8Q96BT7 664 aaKnown RBP17.91■□□□□ 0.46
FAM49B-208ENST00000518344 HIST1H2AHQ96KK5 128 aa17.91■□□□□ 0.46
FAM49B-208ENST00000518344 HIST1H2AJQ99878 128 aa17.91■□□□□ 0.46
FAM49B-208ENST00000518344 H2AFJQ9BTM1 129 aa17.91■□□□□ 0.46
FAM49B-208ENST00000518344 PHACTR1Q9C0D0 580 aa17.91■□□□□ 0.46
FAM49B-208ENST00000518344 RHOJQ9H4E5 214 aa17.91■□□□□ 0.46
FAM49B-208ENST00000518344 SLC6A20Q9NP91 592 aa17.91■□□□□ 0.46
FAM49B-208ENST00000518344 TXLNGQ9NUQ3 528 aa17.91■□□□□ 0.46
FAM49B-208ENST00000518344 DHCR7Q9UBM7 475 aaKnown RBP17.91■□□□□ 0.46
FAM49B-208ENST00000518344 FAM208BQ5VWN6 2430 aa17.9■□□□□ 0.46
FAM49B-208ENST00000518344 NRP2O60462 931 aa17.9■□□□□ 0.46
FAM49B-208ENST00000518344 CCNDBP1O95273 360 aa17.9■□□□□ 0.46
FAM49B-208ENST00000518344 TSPAN12O95859 305 aa17.9■□□□□ 0.46
FAM49B-208ENST00000518344 GSTA2P09210 222 aa17.9■□□□□ 0.46
FAM49B-208ENST00000518344 FAM87AP0C7U9 286 aa17.9■□□□□ 0.46
FAM49B-208ENST00000518344 CCR10P46092 362 aa17.9■□□□□ 0.46
FAM49B-208ENST00000518344 VSX2P58304 361 aaPredicted RBP17.9■□□□□ 0.46
FAM49B-208ENST00000518344 TAS2R39P59534 338 aa17.9■□□□□ 0.46
FAM49B-208ENST00000518344 PRDX1Q06830 199 aaKnown RBP17.9■□□□□ 0.46
FAM49B-208ENST00000518344 ZNF460Q14592 562 aa17.9■□□□□ 0.46
FAM49B-208ENST00000518344 NAA25Q14CX7 972 aa17.9■□□□□ 0.46
FAM49B-208ENST00000518344 TCTE1Q5JU00 501 aa17.9■□□□□ 0.46
FAM49B-208ENST00000518344 MLIPQ5VWP3 458 aa17.9■□□□□ 0.46
FAM49B-208ENST00000518344 RHBDD2Q6NTF9 364 aa17.9■□□□□ 0.46
FAM49B-208ENST00000518344 TMEM207Q6UWW9 146 aa17.9■□□□□ 0.46
FAM49B-208ENST00000518344 MBOAT1Q6ZNC8 495 aa17.9■□□□□ 0.46
FAM49B-208ENST00000518344 CTAGE3PQ8IX95 158 aa17.9■□□□□ 0.46
FAM49B-208ENST00000518344 LRRC56Q8IYG6 542 aaPredicted RBP17.9■□□□□ 0.46
FAM49B-208ENST00000518344 EXD3Q8N9H8 876 aa17.9■□□□□ 0.46
FAM49B-208ENST00000518344 VPS39Q96JC1 886 aa17.9■□□□□ 0.46
FAM49B-208ENST00000518344 DPH2Q9BQC3 489 aaPredicted RBP17.9■□□□□ 0.46
FAM49B-208ENST00000518344 STOX2Q9P2F5 926 aaPredicted RBP17.9■□□□□ 0.46
FAM49B-208ENST00000518344 NDOR1Q9UHB4 597 aa17.9■□□□□ 0.46
FAM49B-208ENST00000518344 SRPK3Q9UPE1 567 aa17.9■□□□□ 0.46
FAM49B-208ENST00000518344 KLK4Q9Y5K2 254 aa17.9■□□□□ 0.46
FAM49B-208ENST00000518344 FAM159BA6NKW6 160 aa17.89■□□□□ 0.45
FAM49B-208ENST00000518344 C9J4A7 227 aa17.89■□□□□ 0.45
FAM49B-208ENST00000518344 EIF2S1P05198 315 aaKnown RBP17.89■□□□□ 0.45
FAM49B-208ENST00000518344 FURINP09958 794 aa17.89■□□□□ 0.45
FAM49B-208ENST00000518344 RAB40ALP0C0E4 278 aa17.89■□□□□ 0.45
FAM49B-208ENST00000518344 SLC12A2P55011 1212 aa17.89■□□□□ 0.45
FAM49B-208ENST00000518344 DCDP81605 110 aaKnown RBP17.89■□□□□ 0.45
FAM49B-208ENST00000518344 PHKG1Q16816 387 aa17.89■□□□□ 0.45
FAM49B-208ENST00000518344 CRTC2Q53ET0 693 aaPredicted RBP17.89■□□□□ 0.45
FAM49B-208ENST00000518344 WASHC2DQ5SRD0 308 aa17.89■□□□□ 0.45
FAM49B-208ENST00000518344 FRMPD2BQ6IN97 320 aa17.89■□□□□ 0.45
FAM49B-208ENST00000518344 FBXO42Q6P3S6 717 aa17.89■□□□□ 0.45
FAM49B-208ENST00000518344 AGTRAPQ6RW13 159 aa17.89■□□□□ 0.45
FAM49B-208ENST00000518344 TTLL10Q6ZVT0 673 aa17.89■□□□□ 0.45
FAM49B-208ENST00000518344 CYS1Q717R9 158 aa17.89■□□□□ 0.45
FAM49B-208ENST00000518344 ADCK2Q7Z695 626 aa17.89■□□□□ 0.45
FAM49B-208ENST00000518344 TTC29Q8NA56 475 aaPredicted RBP17.89■□□□□ 0.45
FAM49B-208ENST00000518344 PROKR1Q8TCW9 393 aa17.89■□□□□ 0.45
FAM49B-208ENST00000518344 SEC14L1Q92503 715 aa17.89■□□□□ 0.45
FAM49B-208ENST00000518344 MED8Q96G25 268 aa17.89■□□□□ 0.45
FAM49B-208ENST00000518344 CPNE1Q99829 537 aa17.89■□□□□ 0.45
FAM49B-208ENST00000518344 PLCD4Q9BRC7 762 aa17.89■□□□□ 0.45
FAM49B-208ENST00000518344 NLNQ9BYT8 704 aa17.89■□□□□ 0.45
FAM49B-208ENST00000518344 TRIM54Q9BYV2 358 aa17.89■□□□□ 0.45
FAM49B-208ENST00000518344 SEMA4CQ9C0C4 833 aa17.89■□□□□ 0.45
FAM49B-208ENST00000518344 ATG10Q9H0Y0 220 aa17.89■□□□□ 0.45
FAM49B-208ENST00000518344 LRRC4CQ9HCJ2 640 aa17.89■□□□□ 0.45
FAM49B-208ENST00000518344 CCDC177Q9NQR7 707 aaPredicted RBP17.89■□□□□ 0.45
FAM49B-208ENST00000518344 ZDHHC18Q9NUE0 388 aa17.89■□□□□ 0.45
FAM49B-208ENST00000518344 ARL15Q9NXU5 204 aa17.89■□□□□ 0.45
FAM49B-208ENST00000518344 UTP6Q9NYH9 597 aaKnown RBP17.89■□□□□ 0.45
FAM49B-208ENST00000518344 GPN3Q9UHW5 284 aaPredicted RBP17.89■□□□□ 0.45
FAM49B-208ENST00000518344 DMGDHQ9UI17 866 aaKnown RBP17.89■□□□□ 0.45
FAM49B-208ENST00000518344 SNX7Q9UNH6 387 aa17.89■□□□□ 0.45
FAM49B-208ENST00000518344 MTO1Q9Y2Z2 717 aaKnown RBP17.89■□□□□ 0.45
FAM49B-208ENST00000518344 MGAQ8IWI9 3026 aa17.89■□□□□ 0.45
FAM49B-208ENST00000518344 LOC400499M0QZD8 3231 aa17.88■□□□□ 0.45
FAM49B-208ENST00000518344 LOC105369274A0A096LPK9 316 aa17.88■□□□□ 0.45
FAM49B-208ENST00000518344 LOC102723532A0A0G2JNH3 316 aa17.88■□□□□ 0.45
FAM49B-208ENST00000518344 OR2A25A4D2G3 310 aa17.88■□□□□ 0.45
FAM49B-208ENST00000518344 SRPX2O60687 465 aaPredicted RBP17.88■□□□□ 0.45
FAM49B-208ENST00000518344 CAPN1P07384 714 aa17.88■□□□□ 0.45
FAM49B-208ENST00000518344 ARSFP54793 590 aa17.88■□□□□ 0.45
FAM49B-208ENST00000518344 TBPL1P62380 186 aa17.88■□□□□ 0.45
FAM49B-208ENST00000518344 ABATP80404 500 aa17.88■□□□□ 0.45
FAM49B-208ENST00000518344 NFKB2Q00653 900 aa17.88■□□□□ 0.45
FAM49B-208ENST00000518344 NAE1Q13564 534 aa17.88■□□□□ 0.45
FAM49B-208ENST00000518344 GRM7Q14831 915 aa17.88■□□□□ 0.45
FAM49B-208ENST00000518344 SLC9A5Q14940 896 aa17.88■□□□□ 0.45
FAM49B-208ENST00000518344 FAM69BQ5VUD6 431 aa17.88■□□□□ 0.45
FAM49B-208ENST00000518344 ZNF385CQ66K41 422 aaPredicted RBP17.88■□□□□ 0.45
FAM49B-208ENST00000518344 FAM198BQ6UWH4 519 aa17.88■□□□□ 0.45
FAM49B-208ENST00000518344 RNF44Q7L0R7 432 aa17.88■□□□□ 0.45
FAM49B-208ENST00000518344 SYVN1Q86TM6 617 aa17.88■□□□□ 0.45
FAM49B-208ENST00000518344 CEP97Q8IW35 865 aa17.88■□□□□ 0.45
FAM49B-208ENST00000518344 OR4N4Q8N0Y3 316 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms