RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 ALDH18A1P54886 795 aaKnown RBP-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 YWHAZP63104 245 aaKnown RBP-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 GCNT1Q02742 428 aa-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 DAZ2Q13117 558 aaKnown RBP-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 SOWAHCQ53LP3 525 aaPredicted RBP-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 COBLL1Q53SF7 1204 aa-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 LEKR1Q6ZMV7 388 aa-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 SPANXA2-OT1Q8N9U9 137 aa-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 HDAC2Q92769 488 aaKnown RBP-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 C11orf52Q96A22 123 aa-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 CDRT15Q96T59 188 aa-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 SEMA6AQ9H2E6 1030 aa-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 TMEM60Q9H2L4 133 aa-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 NXF3Q9H4D5 531 aaKnown RBP-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 DAZ3Q9NR90 486 aaKnown RBP-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 DACT1Q9NYF0 836 aa-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 PA2G4Q9UQ80 394 aaKnown RBP-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 AUP1Q9Y679 476 aa-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 CACNG2Q9Y698 323 aa-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 KMT2CQ8NEZ4 4911 aaKnown RBP-1.37□□□□□ -2.63
RNU6-539P-201ENST00000516665 LRRK1Q38SD2 2015 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 A0A1W2PNN7 141 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 OR2M5A3KFT3 312 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 FAM166BA8MTA8 275 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 RPL36A-HNRNPH2H7BZ11 118 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 M0QZ24 198 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 CSF1P09603 554 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 RPL35AP18077 110 aaKnown RBP-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 UGT1A6P19224 532 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 DNASE1P24855 282 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 RPA1P27694 616 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 ZNF45Q02386 682 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 SLC39A6Q13433 755 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 THOC5Q13769 683 aaKnown RBP-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 PRICKLE4Q2TBC4 344 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 JADE1Q6IE81 842 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 MORN3Q6PF18 240 aaPredicted RBP-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 C17orf99Q6UX52 265 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 NEGR1Q7Z3B1 354 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 NRSN1Q8IZ57 195 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 THAP8Q8NA92 274 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 OR5T2Q8NGG2 359 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 LRTOMTQ8WZ04 291 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 JAKMIP2Q96AA8 810 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 NABP1Q96AH0 204 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 BBS4Q96RK4 519 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 EYA3Q99504 573 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 DHX33Q9H6R0 707 aaKnown RBP-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 TTC12Q9H892 705 aaPredicted RBP-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 IL1RAPQ9NPH3 570 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 LHX9Q9NQ69 397 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 MIOSQ9NXC5 875 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 P4HTMQ9NXG6 502 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 NLGN3Q9NZ94 848 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 KLHL21Q9UJP4 597 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 TBX21Q9UL17 535 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 MAN2B2Q9Y2E5 1009 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 MRPL11Q9Y3B7 192 aaKnown RBP-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 ABCA4P78363 2273 aa-1.38□□□□□ -2.63
RNU6-539P-201ENST00000516665 KANSL1LA0AUZ9 987 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 SYNDIG1LA6NDD5 238 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 H0YAE9 185 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 GFYI3L273 518 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 SAP18O00422 153 aaKnown RBP-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 RTN2O75298 545 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 SEC14L2O76054 403 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 RCBTB2O95199 551 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 UQCRFS1P1P0C7P4 283 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 LONP1P36776 959 aaKnown RBP-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 ACVR1BP36896 505 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 SERPINF1P36955 418 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 CDK3Q00526 305 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 PAX2Q02962 417 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 OVGP1Q12889 678 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 DAG1Q14118 895 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 POLD3Q15054 466 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 VWC2Q2TAL6 325 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 FAM83BQ5T0W9 1011 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 TMEM26Q6ZUK4 368 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 CACNA2D4Q7Z3S7 1137 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 TDRPQ86YL5 185 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 APOBEC3FQ8IUX4 373 aaKnown RBP-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 SLC38A9Q8NBW4 561 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 FAM71BQ8TC56 605 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 FRZBQ92765 325 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 SGK494Q96LW2 274 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 OR2B2Q9GZK3 357 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 LMAN2LQ9H0V9 348 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 ZBP1Q9H171 429 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 MOB1AQ9H8S9 216 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 LTB4R2Q9NPC1 389 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 MYO1AQ9UBC5 1043 aa-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 LUC7L2Q9Y383 392 aaKnown RBP-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 AMMECR1Q9Y4X0 333 aaPredicted RBP-1.39□□□□□ -2.63
RNU6-539P-201ENST00000516665 CELSR1Q9NYQ6 3014 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 PCLOQ9Y6V0 5065 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 A0A096LNJ9 63 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 TRAV40A0A0B4J280 105 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 GLTPD2A6NH11 291 aa-1.4□□□□□ -2.63
RNU6-539P-201ENST00000516665 ZNF487B1APH4 448 aa-1.4□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms