RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 SMARCAL1Q9NZC9 954 aa9.96□□□□□ -0.82
CLDND1-231ENST00000515620 ZC3H7BQ9UGR2 993 aaKnown RBP9.96□□□□□ -0.82
CLDND1-231ENST00000515620 ST6GALNAC2Q9UJ37 374 aa9.96□□□□□ -0.82
CLDND1-231ENST00000515620 AKAP6Q13023 2319 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 JMJD1CQ15652 2540 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 LOC102723996A0A087X1L8 192 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 LOC105369274A0A096LPK9 316 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 TRBV5-4A0A0C4DH59 114 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 LOC102723532A0A0G2JNH3 316 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 A0A0J9YVX5 310 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 BHMG1C9JSJ3 638 aaPredicted RBP9.95□□□□□ -0.82
CLDND1-231ENST00000515620 SNPHO15079 494 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 NRP2O60462 931 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 SEC24DO94855 1032 aaPredicted RBP9.95□□□□□ -0.82
CLDND1-231ENST00000515620 TOXO94900 526 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 S1PR4O95977 384 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 ERVK-10P10266 1014 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 ICAM2P13598 275 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 CD46P15529 392 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 ZNF24P17028 368 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 CD9P21926 228 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 CHRNB4P30926 498 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 CSE1LP55060 971 aaKnown RBP9.95□□□□□ -0.82
CLDND1-231ENST00000515620 DBN1Q16643 649 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 MUM1Q2TAK8 710 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 ACER2Q5QJU3 275 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 SPINK14Q6IE38 97 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 ALKBH5Q6P6C2 394 aaKnown RBP9.95□□□□□ -0.82
CLDND1-231ENST00000515620 GALNTL5Q7Z4T8 443 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.95□□□□□ -0.82
CLDND1-231ENST00000515620 BIVMQ86UB2 503 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 CD163Q86VB7 1156 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 VSIG1Q86XK7 387 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 OR4N4Q8N0Y3 316 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 TMEM178AQ8NBL3 297 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 ASB5Q8WWX0 329 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 SCMH1Q96GD3 660 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 DNAJC1Q96KC8 554 aaKnown RBP9.95□□□□□ -0.82
CLDND1-231ENST00000515620 CABS1Q96KC9 395 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 IMMP1LQ96LU5 166 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 UTP23Q9BRU9 249 aaKnown RBP9.95□□□□□ -0.82
CLDND1-231ENST00000515620 TUBB6Q9BUF5 446 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 MENTQ9BUN1 341 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 KCNJ16Q9NPI9 418 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 RNF6Q9Y252 685 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 PLEKHA6Q9Y2H5 1048 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 ASB1Q9Y576 335 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 PRSS21Q9Y6M0 314 aa9.95□□□□□ -0.82
CLDND1-231ENST00000515620 INTS1Q8N201 2190 aaKnown RBP9.95□□□□□ -0.82
CLDND1-231ENST00000515620 SLC5A10A0PJK1 596 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 KIAA1324LA8MWY0 1029 aaPredicted RBP9.94□□□□□ -0.82
CLDND1-231ENST00000515620 PRPF4O43172 522 aaKnown RBP eCLIP9.94□□□□□ -0.82
CLDND1-231ENST00000515620 SRPX2O60687 465 aaPredicted RBP9.94□□□□□ -0.82
CLDND1-231ENST00000515620 AP2A2O94973 939 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 FTH1P02794 183 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 TPOP07202 933 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 HOXD4P09016 255 aaPredicted RBP9.94□□□□□ -0.82
CLDND1-231ENST00000515620 PSMB5P28074 263 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 PTGER1P34995 402 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 CD96P40200 585 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 ARHGAP25P42331 645 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 MEOX1P50221 254 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 EFNA3P52797 238 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 GEMP55040 296 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 ADAM8P78325 824 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 FASTKQ14296 549 aaKnown RBP9.94□□□□□ -0.82
CLDND1-231ENST00000515620 MESDQ14696 234 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 BTBD16Q32M84 506 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 ODF2Q5BJF6 829 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 BZW1Q7L1Q6 419 aaKnown RBP9.94□□□□□ -0.82
CLDND1-231ENST00000515620 TMTC1Q8IUR5 882 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 PIANPQ8IYJ0 282 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 AMER3Q8N944 861 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 FAM98AQ8NCA5 519 aaKnown RBP9.94□□□□□ -0.82
CLDND1-231ENST00000515620 OR2L8Q8NGY9 312 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 LILRB4Q8NHJ6 448 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 HDAC10Q969S8 669 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 ZNF354BQ96LW1 612 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 GORASP1Q9BQQ3 440 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 POLDIP3Q9BY77 421 aaKnown RBP9.94□□□□□ -0.82
CLDND1-231ENST00000515620 GBA3Q9H227 469 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 IMPACTQ9P2X3 320 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 UVRAGQ9P2Y5 699 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 GNPTGQ9UJJ9 305 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 MKL2Q9ULH7 1088 aa9.94□□□□□ -0.82
CLDND1-231ENST00000515620 BZW2Q9Y6E2 419 aaKnown RBP9.94□□□□□ -0.82
CLDND1-231ENST00000515620 IGHV3-20A0A0C4DH32 117 aa9.93□□□□□ -0.82
CLDND1-231ENST00000515620 FAM237BA0A1B0GVD1 139 aa9.93□□□□□ -0.82
CLDND1-231ENST00000515620 MAN1A2O60476 641 aa9.93□□□□□ -0.82
CLDND1-231ENST00000515620 ANXA9O76027 345 aa9.93□□□□□ -0.82
CLDND1-231ENST00000515620 ANXA5P08758 320 aa9.93□□□□□ -0.82
CLDND1-231ENST00000515620 C8orf89P0DMQ9 161 aa9.93□□□□□ -0.82
CLDND1-231ENST00000515620 DNASE1P24855 282 aa9.93□□□□□ -0.82
CLDND1-231ENST00000515620 ADRA1AP35348 466 aa9.93□□□□□ -0.82
CLDND1-231ENST00000515620 NR2C2P49116 596 aa9.93□□□□□ -0.82
CLDND1-231ENST00000515620 OC90Q02509 493 aaPredicted RBP9.93□□□□□ -0.82
CLDND1-231ENST00000515620 TAZQ16635 292 aa9.93□□□□□ -0.82
CLDND1-231ENST00000515620 SYT16Q17RD7 645 aa9.93□□□□□ -0.82
CLDND1-231ENST00000515620 DNAJC21Q5F1R6 531 aaKnown RBP9.93□□□□□ -0.82
CLDND1-231ENST00000515620 RNFT1Q5M7Z0 435 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms