RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 ADAMTS20P59510 1910 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 A0A1W2PQM1 296 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 KATNA1O75449 491 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 WDR47O94967 919 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 SIX3O95343 332 aaPredicted RBP11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 CPNE6O95741 557 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 MYF5P13349 255 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 CHN1P15882 459 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 EPB42P16452 691 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 UGT2B7P16662 529 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 GNAZP19086 355 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 EPORP19235 508 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 EEF1DP29692 281 aaKnown RBP11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 ALDH4A1P30038 563 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 PRDX3P30048 256 aaKnown RBP11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 E2F1Q01094 437 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 CFHR1Q03591 330 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 GTF2H2Q13888 395 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 TBCCQ15814 346 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 PDK4Q16654 411 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 C18orf21Q32NC0 220 aaPredicted RBP11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 ICE2Q659A1 982 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 ARMC6Q6NXE6 501 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 GTF2H2CQ6P1K8 395 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 SPESP1Q6UW49 350 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 FRMD7Q6ZUT3 714 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 PRSS42Q7Z5A4 293 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 ZNF761Q86XN6 746 aaPredicted RBP11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 NUDCD3Q8IVD9 361 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 CHCHD4Q8N4Q1 142 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 ANKRD42Q8N9B4 389 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 PPFIBP2Q8ND30 876 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 ABHD11Q8NFV4 315 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 OR2L3Q8NG85 312 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 OR4K1Q8NGD4 311 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 ZUFSPQ96AP4 578 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 ZDHHC12Q96GR4 267 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 AHCYL2Q96HN2 611 aaKnown RBP11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 MAGEB10Q96LZ2 347 aaPredicted RBP11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 NRTNQ99748 197 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 NTMT1Q9BV86 223 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 SARGQ9BW04 601 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 GATA5Q9BWX5 397 aaPredicted RBP11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 PITHD1Q9GZP4 211 aaPredicted RBP11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 LRRN3Q9H3W5 708 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 GSTO2Q9H4Y5 243 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 C1GALT1Q9NS00 363 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 INTS9Q9NV88 658 aaKnown RBP11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 TOR4AQ9NXH8 423 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 SLC22A14Q9Y267 594 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 ASB1Q9Y576 335 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 KCNE2Q9Y6J6 123 aa11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 MDC1Q14676 2089 aaKnown RBP11.55□□□□□ -0.56
PDLIM5-220ENST00000514830 A0A0J9YY10 115 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 TLCD2A6NGC4 264 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 TMEM114B3SHH9 223 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 CCNT2O60583 730 aaKnown RBP11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 MLYCDO95822 493 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 SERPINE1P05121 402 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 ANKRD34CP0C6C1 535 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 CEACAM1P13688 526 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 TYRP1P17643 537 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 POLR2CP19387 275 aaPredicted RBP11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 CMPK1P30085 196 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 CSF2RBP32927 897 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 GDF5P43026 501 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 NAGLUP54802 743 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 CCL7P80098 99 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 CLCQ05315 142 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 LCP2Q13094 533 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 TRIP6Q15654 476 aaKnown RBP11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 ZNF425Q6IV72 752 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 TMEM71Q6P5X7 295 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 SUSD1Q6UWL2 747 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 RGS9BPQ6ZS82 235 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 GOLGA7Q7Z5G4 137 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 C17orf64Q86WR6 236 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 KMT5CQ86Y97 462 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 CACTIN-AS1Q8N1I8 211 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 OR4D9Q8NGE8 314 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 FAM76AQ8TAV0 307 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 MDM1Q8TC05 714 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 JPH3Q8WXH2 748 aaPredicted RBP11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 PYCR2Q96C36 320 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 MED8Q96G25 268 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 ZNF382Q96SR6 550 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 MECRQ9BV79 373 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 DRC3Q9H069 523 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 ABCG4Q9H172 646 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 PELI2Q9HAT8 420 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 ZBTB26Q9HCK0 441 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 TMEM184CQ9NVA4 438 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 TAC3Q9UHF0 121 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 DYRK1BQ9Y463 629 aa11.54□□□□□ -0.56
PDLIM5-220ENST00000514830 FAM208BQ5VWN6 2430 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 IGKV1-8A0A0C4DH67 115 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 GSAPA4D1B5 854 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 LRRC14BA6NHZ5 514 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 ISM1B1AKI9 464 aa11.53□□□□□ -0.56
PDLIM5-220ENST00000514830 CAPN5O15484 640 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms