RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 ICE2Q659A1 982 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 C6orf15Q6UXA7 325 aaPredicted RBP13.41□□□□□ -0.26
USP46-209ENST00000514536 VASH2Q86V25 355 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 MCATQ8IVS2 390 aaKnown RBP13.41□□□□□ -0.26
USP46-209ENST00000514536 CACNA2D3Q8IZS8 1091 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 IL22RA1Q8N6P7 574 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 FBXL8Q96CD0 374 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 UBXN10Q96LJ8 280 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 SLC6A20Q9NP91 592 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 CCDC177Q9NQR7 707 aaPredicted RBP13.41□□□□□ -0.26
USP46-209ENST00000514536 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.41□□□□□ -0.26
USP46-209ENST00000514536 PLCL2Q9UPR0 1127 aa13.41□□□□□ -0.26
USP46-209ENST00000514536 V9GYY5 206 aaPredicted RBP13.41□□□□□ -0.26
USP46-209ENST00000514536 LAMA5O15230 3695 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 EXOC1LA0A1B0GW35 172 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 E7EQ34 232 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 NRP2O60462 931 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 CTSVO60911 334 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 CCNDBP1O95273 360 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 C2P06681 752 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 CTSBP07858 339 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 TYK2P29597 1187 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 SERPINB9P50453 376 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 ATP6V0D1P61421 351 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 TBPL1P62380 186 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 ABATP80404 500 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 DLG1Q12959 904 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 SLC29A2Q14542 456 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 ZC3H12BQ5HYM0 836 aaKnown RBP13.4□□□□□ -0.26
USP46-209ENST00000514536 MANEAQ5SRI9 462 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 BROXQ5VW32 411 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 FRA10AC1Q70Z53 315 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 ADAMTSL2Q86TH1 951 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 GPR135Q8IZ08 494 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 DCAKDQ8WVC6 231 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 ATL1Q8WXF7 558 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 CCNL2Q96S94 520 aaPredicted RBP13.4□□□□□ -0.26
USP46-209ENST00000514536 EGFL8Q99944 293 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 SNX15Q9NRS6 342 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 EURLQ9NYK6 297 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 TLK1Q9UKI8 766 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 LHX6Q9UPM6 363 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 ACOT9Q9Y305 439 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 OARD1Q9Y530 152 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 KLK4Q9Y5K2 254 aa13.4□□□□□ -0.26
USP46-209ENST00000514536 CACNA1GO43497 2377 aa13.39□□□□□ -0.27
USP46-209ENST00000514536 AHCTF1Q8WYP5 2266 aa13.39□□□□□ -0.27
USP46-209ENST00000514536 IGKV1-8A0A0C4DH67 115 aa13.39□□□□□ -0.27
USP46-209ENST00000514536 OR2B3O76000 313 aa13.39□□□□□ -0.27
USP46-209ENST00000514536 ANXA5P08758 320 aa13.39□□□□□ -0.27
USP46-209ENST00000514536 LTA4HP09960 611 aaKnown RBP13.39□□□□□ -0.27
USP46-209ENST00000514536 VSNL1P62760 191 aa13.39□□□□□ -0.27
USP46-209ENST00000514536 PRAMEF13Q5VWM6 474 aa13.39□□□□□ -0.27
USP46-209ENST00000514536 CAPN13Q6MZZ7 669 aaPredicted RBP13.39□□□□□ -0.27
USP46-209ENST00000514536 FBXO42Q6P3S6 717 aa13.39□□□□□ -0.27
USP46-209ENST00000514536 TBC1D1Q86TI0 1168 aaPredicted RBP13.39□□□□□ -0.27
USP46-209ENST00000514536 ESX1Q8N693 406 aa13.39□□□□□ -0.27
USP46-209ENST00000514536 SLC38A9Q8NBW4 561 aa13.39□□□□□ -0.27
USP46-209ENST00000514536 OR56A3Q8NH54 315 aa13.39□□□□□ -0.27
USP46-209ENST00000514536 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.39□□□□□ -0.27
USP46-209ENST00000514536 PTERQ96BW5 349 aa13.39□□□□□ -0.27
USP46-209ENST00000514536 PYCR2Q96C36 320 aa13.39□□□□□ -0.27
USP46-209ENST00000514536 NXNL1Q96CM4 212 aa13.39□□□□□ -0.27
USP46-209ENST00000514536 PLCD4Q9BRC7 762 aa13.39□□□□□ -0.27
USP46-209ENST00000514536 SGPP1Q9BX95 441 aa13.39□□□□□ -0.27
USP46-209ENST00000514536 EPB41L4BQ9H329 900 aa13.39□□□□□ -0.27
USP46-209ENST00000514536 NMRAL1Q9HBL8 299 aa13.39□□□□□ -0.27
USP46-209ENST00000514536 IRAK4Q9NWZ3 460 aa13.39□□□□□ -0.27
USP46-209ENST00000514536 PADI1Q9ULC6 663 aa13.39□□□□□ -0.27
USP46-209ENST00000514536 SNX7Q9UNH6 387 aa13.39□□□□□ -0.27
USP46-209ENST00000514536 SSUH2Q9Y2M2 353 aa13.39□□□□□ -0.27
USP46-209ENST00000514536 PCDHB3Q9Y5E6 796 aa13.39□□□□□ -0.27
USP46-209ENST00000514536 CELSR3Q9NYQ7 3312 aa13.39□□□□□ -0.27
USP46-209ENST00000514536 ANKRD11Q6UB99 2663 aaPredicted RBP13.39□□□□□ -0.27
USP46-209ENST00000514536 SDK2Q58EX2 2172 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 A0A087X1B8 175 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 A0A096LPK6 155 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 A0A0J9YVX5 310 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 LOC101059948A0A1B0GTJ6 334 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 OR2A25A4D2G3 310 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 NCF1BA6NI72 391 aaPredicted RBP13.38□□□□□ -0.27
USP46-209ENST00000514536 NCF1CA8MVU1 366 aaPredicted RBP13.38□□□□□ -0.27
USP46-209ENST00000514536 H3BMH7 237 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 H7BY64 318 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 EFSO43281 561 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 ZNF749O43361 778 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 CPNE3O75131 537 aaKnown RBP13.38□□□□□ -0.27
USP46-209ENST00000514536 KRT38O76015 456 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 MT-ND3P03897 115 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 ALDOAP04075 364 aaKnown RBP13.38□□□□□ -0.27
USP46-209ENST00000514536 CCNYL3P0C7X3 344 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 NCF1P14598 390 aaPredicted RBP13.38□□□□□ -0.27
USP46-209ENST00000514536 NPPBP16860 134 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 CCND1P24385 295 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 SLC26A3P40879 764 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 KCNC1P48547 511 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 SERPINB8P50452 374 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 CSRP3P50461 194 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 CDKL1Q00532 357 aa13.38□□□□□ -0.27
USP46-209ENST00000514536 IRF9Q00978 393 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms