RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 UBXN7O94888 489 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 CLDN9O95484 217 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 ESRRBO95718 433 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 ENO1P06733 434 aaKnown RBP10.49□□□□□ -0.73
PFDN1-204ENST00000512707 PROS1P07225 676 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 EBLN1P0CF75 366 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 PNLIPP16233 465 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 CXCR2P25025 360 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 CDH13P55290 713 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 GPLD1P80108 840 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 OCRLQ01968 901 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 IRF8Q02556 426 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 LAPTM5Q13571 262 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 SF3A2Q15428 464 aaKnown RBP10.49□□□□□ -0.73
PFDN1-204ENST00000512707 SF1Q15637 639 aaKnown RBP10.49□□□□□ -0.73
PFDN1-204ENST00000512707 HIST2H2ACQ16777 129 aaPredicted RBP10.49□□□□□ -0.73
PFDN1-204ENST00000512707 XKR6Q5GH73 641 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 PAGE2BQ5JRK9 111 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 SH2D4BQ5SQS7 431 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 HIST2H2AA3Q6FI13 130 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 MILR1Q7Z6M3 343 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 CPLX4Q7Z7G2 160 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 CUZD1Q86UP6 607 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 WDR75Q8IWA0 830 aaKnown RBP10.49□□□□□ -0.73
PFDN1-204ENST00000512707 C2orf73Q8N5S3 287 aaPredicted RBP10.49□□□□□ -0.73
PFDN1-204ENST00000512707 OR2I1PQ8NGU4 316 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 CCT6BQ92526 530 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 UBE2E3Q969T4 207 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 GRAMD1AQ96CP6 724 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 REPS1Q96D71 796 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 APOLD1Q96LR9 279 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 NSUN5Q96P11 429 aaKnown RBP10.49□□□□□ -0.73
PFDN1-204ENST00000512707 MENTQ9BUN1 341 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 EFCAB11Q9BUY7 163 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 CAAP1Q9H8G2 361 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 INTS7Q9NVH2 962 aaKnown RBP10.49□□□□□ -0.73
PFDN1-204ENST00000512707 HRASLS2Q9NWW9 162 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 TAC3Q9UHF0 121 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 RNF215Q9Y6U7 377 aa10.49□□□□□ -0.73
PFDN1-204ENST00000512707 ACACBO00763 2458 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 PRAMEF33A0A0G2JMD5 474 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 OR5K3A6NET4 321 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 TRIM38O00635 465 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 PPM1DO15297 605 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 MAP3K7O43318 606 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 EDF1O60869 148 aaKnown RBP10.48□□□□□ -0.73
PFDN1-204ENST00000512707 SHOX2O60902 331 aaPredicted RBP10.48□□□□□ -0.73
PFDN1-204ENST00000512707 LYPLA1O75608 230 aaPredicted RBP10.48□□□□□ -0.73
PFDN1-204ENST00000512707 HGFP14210 728 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 TSPAN8P19075 237 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 POLR2CP19387 275 aaPredicted RBP10.48□□□□□ -0.73
PFDN1-204ENST00000512707 ALDH4A1P30038 563 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 HMOX2P30519 316 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 GRK3P35626 688 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 HNF4AP41235 474 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 CAPZBP47756 277 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 RPL14P50914 215 aaKnown RBP10.48□□□□□ -0.73
PFDN1-204ENST00000512707 CCR8P51685 355 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 CHIT1Q13231 466 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 FASTKQ14296 549 aaKnown RBP10.48□□□□□ -0.73
PFDN1-204ENST00000512707 LIPJQ5W064 366 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 ICE2Q659A1 982 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 DGLUCYQ7Z3D6 616 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 ZNF438Q7Z4V0 828 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 TMPRSS11BQ86T26 416 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 SFTPA2Q8IWL1 248 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 LRRC56Q8IYG6 542 aaPredicted RBP10.48□□□□□ -0.73
PFDN1-204ENST00000512707 KIAA2013Q8IYS2 634 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 KRT78Q8N1N4 520 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 LINC01555Q8NAE3 123 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 PIWIL2Q8TC59 973 aaKnown RBP10.48□□□□□ -0.73
PFDN1-204ENST00000512707 AGAP11Q8TF27 550 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 SLC5A11Q8WWX8 675 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 JPH3Q8WXH2 748 aaPredicted RBP10.48□□□□□ -0.73
PFDN1-204ENST00000512707 PTCD3Q96EY7 689 aaKnown RBP10.48□□□□□ -0.73
PFDN1-204ENST00000512707 ZDHHC12Q96GR4 267 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 SIKE1Q9BRV8 207 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 NTMT1Q9BV86 223 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 ACAT2Q9BWD1 397 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 TRIM55Q9BYV6 548 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 SLC29A3Q9BZD2 475 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 EHD1Q9H4M9 534 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 PELI2Q9HAT8 420 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 MRPS30Q9NP92 439 aaKnown RBP10.48□□□□□ -0.73
PFDN1-204ENST00000512707 ACSS2Q9NR19 701 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 FGFR1OP2Q9NVK5 253 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 ACTR10Q9NZ32 417 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 FTSJ1Q9UET6 329 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 VTI1BQ9UEU0 232 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 TRPS1Q9UHF7 1281 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 SNX7Q9UNH6 387 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 SNX6Q9UNH7 406 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 ASB1Q9Y576 335 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 SDK1Q7Z5N4 2213 aa10.48□□□□□ -0.73
PFDN1-204ENST00000512707 TMEM131Q92545 1883 aa10.47□□□□□ -0.73
PFDN1-204ENST00000512707 CPED1A4D0V7 1026 aa10.47□□□□□ -0.73
PFDN1-204ENST00000512707 TRPC5OSA6NMA1 111 aa10.47□□□□□ -0.73
PFDN1-204ENST00000512707 BTN3A3O00478 584 aa10.47□□□□□ -0.73
PFDN1-204ENST00000512707 OR7A17O14581 309 aa10.47□□□□□ -0.73
PFDN1-204ENST00000512707 AZIN1O14977 448 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms