RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 CHD6Q8TD26 2715 aa16.58■□□□□ 0.25
CLDND1-221ENST00000510541 A0A087WUV0 522 aaPredicted RBP16.58■□□□□ 0.24
CLDND1-221ENST00000510541 TMEM150CB9EJG8 249 aa16.58■□□□□ 0.24
CLDND1-221ENST00000510541 EFSO43281 561 aa16.58■□□□□ 0.24
CLDND1-221ENST00000510541 SCRG1O75711 98 aa16.58■□□□□ 0.24
CLDND1-221ENST00000510541 KIAA0754O94854 1291 aa16.58■□□□□ 0.24
CLDND1-221ENST00000510541 RAB40ALP0C0E4 278 aa16.58■□□□□ 0.24
CLDND1-221ENST00000510541 CCNYL3P0C7X3 344 aa16.58■□□□□ 0.24
CLDND1-221ENST00000510541 PVRP15151 417 aa16.58■□□□□ 0.24
CLDND1-221ENST00000510541 ITPKBP27987 946 aa16.58■□□□□ 0.24
CLDND1-221ENST00000510541 RPA3P35244 121 aaPredicted RBP16.58■□□□□ 0.24
CLDND1-221ENST00000510541 ARSFP54793 590 aa16.58■□□□□ 0.24
CLDND1-221ENST00000510541 MC1RQ01726 317 aa16.58■□□□□ 0.24
CLDND1-221ENST00000510541 GPR19Q15760 415 aa16.58■□□□□ 0.24
CLDND1-221ENST00000510541 PHKG1Q16816 387 aa16.58■□□□□ 0.24
CLDND1-221ENST00000510541 ZNF385CQ66K41 422 aaPredicted RBP16.58■□□□□ 0.24
CLDND1-221ENST00000510541 AGTRAPQ6RW13 159 aa16.58■□□□□ 0.24
CLDND1-221ENST00000510541 CAPN12Q6ZSI9 719 aa16.58■□□□□ 0.24
CLDND1-221ENST00000510541 TCAIMQ8N3R3 496 aa16.58■□□□□ 0.24
CLDND1-221ENST00000510541 ABHD11Q8NFV4 315 aa16.58■□□□□ 0.24
CLDND1-221ENST00000510541 OR1L3Q8NH93 324 aa16.58■□□□□ 0.24
CLDND1-221ENST00000510541 KIAA1143Q96AT1 154 aaPredicted RBP16.58■□□□□ 0.24
CLDND1-221ENST00000510541 DCBLD2Q96PD2 775 aa16.58■□□□□ 0.24
CLDND1-221ENST00000510541 DHRS4Q9BTZ2 278 aa16.58■□□□□ 0.24
CLDND1-221ENST00000510541 PPCSQ9HAB8 311 aa16.58■□□□□ 0.24
CLDND1-221ENST00000510541 MRPS30Q9NP92 439 aaKnown RBP16.58■□□□□ 0.24
CLDND1-221ENST00000510541 LHX9Q9NQ69 397 aa16.58■□□□□ 0.24
CLDND1-221ENST00000510541 CCDC177Q9NQR7 707 aaPredicted RBP16.58■□□□□ 0.24
CLDND1-221ENST00000510541 NFU1Q9UMS0 254 aa16.58■□□□□ 0.24
CLDND1-221ENST00000510541 FAM208BQ5VWN6 2430 aa16.58■□□□□ 0.24
CLDND1-221ENST00000510541 IGKV1-8A0A0C4DH67 115 aa16.57■□□□□ 0.24
CLDND1-221ENST00000510541 HMX2A2RU54 273 aa16.57■□□□□ 0.24
CLDND1-221ENST00000510541 PABPN1LA6NDY0 278 aaKnown RBP16.57■□□□□ 0.24
CLDND1-221ENST00000510541 TXNDC9O14530 226 aa16.57■□□□□ 0.24
CLDND1-221ENST00000510541 TIAF1O95411 115 aa16.57■□□□□ 0.24
CLDND1-221ENST00000510541 KLK3P07288 261 aaPredicted RBP16.57■□□□□ 0.24
CLDND1-221ENST00000510541 SLC35E2BP0CK96 405 aa16.57■□□□□ 0.24
CLDND1-221ENST00000510541 ZNF28P17035 718 aa16.57■□□□□ 0.24
CLDND1-221ENST00000510541 MAGEA12P43365 314 aa16.57■□□□□ 0.24
CLDND1-221ENST00000510541 CAPN13Q6MZZ7 669 aaPredicted RBP16.57■□□□□ 0.24
CLDND1-221ENST00000510541 CCDC81Q6ZN84 652 aa16.57■□□□□ 0.24
CLDND1-221ENST00000510541 GPR155Q7Z3F1 870 aa16.57■□□□□ 0.24
CLDND1-221ENST00000510541 PAQR7Q86WK9 346 aa16.57■□□□□ 0.24
CLDND1-221ENST00000510541 TMEM126BQ8IUX1 230 aa16.57■□□□□ 0.24
CLDND1-221ENST00000510541 MCATQ8IVS2 390 aaKnown RBP16.57■□□□□ 0.24
CLDND1-221ENST00000510541 DSELQ8IZU8 1212 aa16.57■□□□□ 0.24
CLDND1-221ENST00000510541 IL22RA1Q8N6P7 574 aa16.57■□□□□ 0.24
CLDND1-221ENST00000510541 ZSCAN1Q8NBB4 408 aa16.57■□□□□ 0.24
CLDND1-221ENST00000510541 OR4K1Q8NGD4 311 aa16.57■□□□□ 0.24
CLDND1-221ENST00000510541 RHEBL1Q8TAI7 183 aa16.57■□□□□ 0.24
CLDND1-221ENST00000510541 ANKRD49Q8WVL7 239 aa16.57■□□□□ 0.24
CLDND1-221ENST00000510541 KIAA1191Q96A73 305 aa16.57■□□□□ 0.24
CLDND1-221ENST00000510541 ZFYVE21Q9BQ24 234 aa16.57■□□□□ 0.24
CLDND1-221ENST00000510541 ARL15Q9NXU5 204 aa16.57■□□□□ 0.24
CLDND1-221ENST00000510541 SPTBP11277 2137 aa16.57■□□□□ 0.24
CLDND1-221ENST00000510541 A0A087X1B8 175 aa16.56■□□□□ 0.24
CLDND1-221ENST00000510541 MEN1O00255 615 aa16.56■□□□□ 0.24
CLDND1-221ENST00000510541 ZSCAN9O15535 394 aaPredicted RBP16.56■□□□□ 0.24
CLDND1-221ENST00000510541 OR2B3O76000 313 aa16.56■□□□□ 0.24
CLDND1-221ENST00000510541 IPO13O94829 963 aaKnown RBP16.56■□□□□ 0.24
CLDND1-221ENST00000510541 ITGB2P05107 769 aa16.56■□□□□ 0.24
CLDND1-221ENST00000510541 ANXA5P08758 320 aa16.56■□□□□ 0.24
CLDND1-221ENST00000510541 COL6A2P12110 1019 aa16.56■□□□□ 0.24
CLDND1-221ENST00000510541 CD1DP15813 335 aa16.56■□□□□ 0.24
CLDND1-221ENST00000510541 RHDQ02161 417 aa16.56■□□□□ 0.24
CLDND1-221ENST00000510541 PCDH1Q08174 1060 aa16.56■□□□□ 0.24
CLDND1-221ENST00000510541 GRM7Q14831 915 aa16.56■□□□□ 0.24
CLDND1-221ENST00000510541 RASA2Q15283 850 aa16.56■□□□□ 0.24
CLDND1-221ENST00000510541 TGIF1Q15583 401 aa16.56■□□□□ 0.24
CLDND1-221ENST00000510541 FAM214AQ32MH5 1076 aa16.56■□□□□ 0.24
CLDND1-221ENST00000510541 METTL2BQ6P1Q9 378 aaKnown RBP16.56■□□□□ 0.24
CLDND1-221ENST00000510541 TAOK1Q7L7X3 1001 aa16.56■□□□□ 0.24
CLDND1-221ENST00000510541 TRIM73Q86UV7 250 aa16.56■□□□□ 0.24
CLDND1-221ENST00000510541 LCA5Q86VQ0 697 aa16.56■□□□□ 0.24
CLDND1-221ENST00000510541 N4BP2L2Q92802 583 aaPredicted RBP16.56■□□□□ 0.24
CLDND1-221ENST00000510541 NACC2Q96BF6 587 aa16.56■□□□□ 0.24
CLDND1-221ENST00000510541 MVB12AQ96EY5 273 aa16.56■□□□□ 0.24
CLDND1-221ENST00000510541 CATSPER2Q96P56 530 aa16.56■□□□□ 0.24
CLDND1-221ENST00000510541 DPH7Q9BTV6 452 aa16.56■□□□□ 0.24
CLDND1-221ENST00000510541 NMRAL1Q9HBL8 299 aa16.56■□□□□ 0.24
CLDND1-221ENST00000510541 CTNNAL1Q9UBT7 734 aa16.56■□□□□ 0.24
CLDND1-221ENST00000510541 TAC3Q9UHF0 121 aa16.56■□□□□ 0.24
CLDND1-221ENST00000510541 MGAQ8IWI9 3026 aa16.55■□□□□ 0.24
CLDND1-221ENST00000510541 NBEAQ8NFP9 2946 aa16.55■□□□□ 0.24
CLDND1-221ENST00000510541 CTSVO60911 334 aa16.55■□□□□ 0.24
CLDND1-221ENST00000510541 KRT38O76015 456 aa16.55■□□□□ 0.24
CLDND1-221ENST00000510541 INHBAP08476 426 aa16.55■□□□□ 0.24
CLDND1-221ENST00000510541 RHOXF2BP0C7M4 288 aa16.55■□□□□ 0.24
CLDND1-221ENST00000510541 CCDC166P0CW27 439 aa16.55■□□□□ 0.24
CLDND1-221ENST00000510541 NPPBP16860 134 aa16.55■□□□□ 0.24
CLDND1-221ENST00000510541 TBPL1P62380 186 aa16.55■□□□□ 0.24
CLDND1-221ENST00000510541 ZXDCQ2QGD7 858 aaPredicted RBP16.55■□□□□ 0.24
CLDND1-221ENST00000510541 PRTGQ2VWP7 1150 aa16.55■□□□□ 0.24
CLDND1-221ENST00000510541 GARNL3Q5VVW2 1013 aa16.55■□□□□ 0.24
CLDND1-221ENST00000510541 PRAMEF13Q5VWM6 474 aa16.55■□□□□ 0.24
CLDND1-221ENST00000510541 FBXO42Q6P3S6 717 aa16.55■□□□□ 0.24
CLDND1-221ENST00000510541 SUSD1Q6UWL2 747 aa16.55■□□□□ 0.24
CLDND1-221ENST00000510541 PDPRQ8NCN5 879 aa16.55■□□□□ 0.24
CLDND1-221ENST00000510541 STAG3L4Q8TBR4 150 aa16.55■□□□□ 0.24
CLDND1-221ENST00000510541 HNRNPLLQ8WVV9 542 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms