RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 GABPB2Q8TAK5 448 aaPredicted RBP17.43■□□□□ 0.38
CLDND1-220ENST00000508902 GBP5Q96PP8 586 aa17.43■□□□□ 0.38
CLDND1-220ENST00000508902 GPR22Q99680 433 aa17.43■□□□□ 0.38
CLDND1-220ENST00000508902 UNKQ9C0B0 810 aaKnown RBP17.43■□□□□ 0.38
CLDND1-220ENST00000508902 ACTR5Q9H9F9 607 aaPredicted RBP17.43■□□□□ 0.38
CLDND1-220ENST00000508902 FANCEQ9HB96 536 aa17.43■□□□□ 0.38
CLDND1-220ENST00000508902 ENAMQ9NRM1 1142 aa17.43■□□□□ 0.38
CLDND1-220ENST00000508902 SLC22A11Q9NSA0 550 aa17.43■□□□□ 0.38
CLDND1-220ENST00000508902 STARD5Q9NSY2 213 aa17.43■□□□□ 0.38
CLDND1-220ENST00000508902 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.43■□□□□ 0.38
CLDND1-220ENST00000508902 DHCR7Q9UBM7 475 aaKnown RBP17.43■□□□□ 0.38
CLDND1-220ENST00000508902 PADI1Q9ULC6 663 aa17.43■□□□□ 0.38
CLDND1-220ENST00000508902 PLCL2Q9UPR0 1127 aa17.43■□□□□ 0.38
CLDND1-220ENST00000508902 COL6A6A6NMZ7 2263 aa17.42■□□□□ 0.38
CLDND1-220ENST00000508902 NPEPPSL1A6NEC2 478 aa17.42■□□□□ 0.38
CLDND1-220ENST00000508902 E7EQ34 232 aa17.42■□□□□ 0.38
CLDND1-220ENST00000508902 SLC16A5O15375 505 aa17.42■□□□□ 0.38
CLDND1-220ENST00000508902 PHGDHO43175 533 aaKnown RBP17.42■□□□□ 0.38
CLDND1-220ENST00000508902 CNOT3O75175 753 aaKnown RBP17.42■□□□□ 0.38
CLDND1-220ENST00000508902 C1QL1O75973 258 aa17.42■□□□□ 0.38
CLDND1-220ENST00000508902 OR2B3O76000 313 aa17.42■□□□□ 0.38
CLDND1-220ENST00000508902 C8GP07360 202 aa17.42■□□□□ 0.38
CLDND1-220ENST00000508902 GSTA2P09210 222 aa17.42■□□□□ 0.38
CLDND1-220ENST00000508902 PRKAR1AP10644 381 aa17.42■□□□□ 0.38
CLDND1-220ENST00000508902 TCN2P20062 427 aa17.42■□□□□ 0.38
CLDND1-220ENST00000508902 RGS4P49798 205 aa17.42■□□□□ 0.38
CLDND1-220ENST00000508902 IL2P60568 153 aa17.42■□□□□ 0.38
CLDND1-220ENST00000508902 CDC20Q12834 499 aa17.42■□□□□ 0.38
CLDND1-220ENST00000508902 SP140Q13342 867 aa17.42■□□□□ 0.38
CLDND1-220ENST00000508902 ZKSCAN8Q15776 578 aaPredicted RBP17.42■□□□□ 0.38
CLDND1-220ENST00000508902 ICE2Q659A1 982 aa17.42■□□□□ 0.38
CLDND1-220ENST00000508902 FBXO42Q6P3S6 717 aa17.42■□□□□ 0.38
CLDND1-220ENST00000508902 SYTL1Q8IYJ3 562 aa17.42■□□□□ 0.38
CLDND1-220ENST00000508902 SPATA6LQ8N4H0 392 aa17.42■□□□□ 0.38
CLDND1-220ENST00000508902 EXD3Q8N9H8 876 aa17.42■□□□□ 0.38
CLDND1-220ENST00000508902 EXTL1Q92935 676 aa17.42■□□□□ 0.38
CLDND1-220ENST00000508902 PDLIM5Q96HC4 596 aaKnown RBP17.42■□□□□ 0.38
CLDND1-220ENST00000508902 DPH7Q9BTV6 452 aa17.42■□□□□ 0.38
CLDND1-220ENST00000508902 PARVBQ9HBI1 364 aa17.42■□□□□ 0.38
CLDND1-220ENST00000508902 PCDHGA6Q9Y5G7 932 aa17.42■□□□□ 0.38
CLDND1-220ENST00000508902 TARM1B6A8C7 271 aa17.41■□□□□ 0.38
CLDND1-220ENST00000508902 ATXN7O15265 892 aaPredicted RBP17.41■□□□□ 0.38
CLDND1-220ENST00000508902 ZSCAN9O15535 394 aaPredicted RBP17.41■□□□□ 0.38
CLDND1-220ENST00000508902 ZBTB14O43829 449 aa17.41■□□□□ 0.38
CLDND1-220ENST00000508902 FKBP9O95302 570 aa17.41■□□□□ 0.38
CLDND1-220ENST00000508902 PRB1P04280 392 aa17.41■□□□□ 0.38
CLDND1-220ENST00000508902 GP5P40197 560 aa17.41■□□□□ 0.38
CLDND1-220ENST00000508902 CSRP3P50461 194 aa17.41■□□□□ 0.38
CLDND1-220ENST00000508902 TSTA3Q13630 321 aaPredicted RBP17.41■□□□□ 0.38
CLDND1-220ENST00000508902 IL10RAQ13651 578 aa17.41■□□□□ 0.38
CLDND1-220ENST00000508902 TBR1Q16650 682 aa17.41■□□□□ 0.38
CLDND1-220ENST00000508902 C1orf189Q5VU69 101 aa17.41■□□□□ 0.38
CLDND1-220ENST00000508902 LRRC8EQ6NSJ5 796 aa17.41■□□□□ 0.38
CLDND1-220ENST00000508902 AGTRAPQ6RW13 159 aa17.41■□□□□ 0.38
CLDND1-220ENST00000508902 RELL1Q8IUW5 271 aa17.41■□□□□ 0.38
CLDND1-220ENST00000508902 PPM1NQ8N819 430 aa17.41■□□□□ 0.38
CLDND1-220ENST00000508902 MNS1Q8NEH6 495 aa17.41■□□□□ 0.38
CLDND1-220ENST00000508902 MR1Q95460 341 aa17.41■□□□□ 0.38
CLDND1-220ENST00000508902 OR4K3Q96R72 315 aa17.41■□□□□ 0.38
CLDND1-220ENST00000508902 UBL7Q96S82 380 aaPredicted RBP17.41■□□□□ 0.38
CLDND1-220ENST00000508902 CPNE1Q99829 537 aa17.41■□□□□ 0.38
CLDND1-220ENST00000508902 PLCD4Q9BRC7 762 aa17.41■□□□□ 0.38
CLDND1-220ENST00000508902 SGPP1Q9BX95 441 aa17.41■□□□□ 0.38
CLDND1-220ENST00000508902 ATG10Q9H0Y0 220 aa17.41■□□□□ 0.38
CLDND1-220ENST00000508902 CDC42EP4Q9H3Q1 356 aaKnown RBP17.41■□□□□ 0.38
CLDND1-220ENST00000508902 ACTL8Q9H568 366 aa17.41■□□□□ 0.38
CLDND1-220ENST00000508902 NSMCE4AQ9NXX6 385 aa17.41■□□□□ 0.38
CLDND1-220ENST00000508902 SERTAD3Q9UJW9 196 aa17.41■□□□□ 0.38
CLDND1-220ENST00000508902 SPTA1P02549 2419 aa17.41■□□□□ 0.38
CLDND1-220ENST00000508902 A0A0J9YVX5 310 aa17.4■□□□□ 0.38
CLDND1-220ENST00000508902 ZNF891A8MT65 544 aaPredicted RBP17.4■□□□□ 0.38
CLDND1-220ENST00000508902 MT-ND3P03897 115 aa17.4■□□□□ 0.38
CLDND1-220ENST00000508902 RPA3P35244 121 aaPredicted RBP17.4■□□□□ 0.38
CLDND1-220ENST00000508902 RHDQ02161 417 aa17.4■□□□□ 0.38
CLDND1-220ENST00000508902 PRDX1Q06830 199 aaKnown RBP17.4■□□□□ 0.38
CLDND1-220ENST00000508902 DLG1Q12959 904 aa17.4■□□□□ 0.38
CLDND1-220ENST00000508902 RHBDD2Q6NTF9 364 aa17.4■□□□□ 0.38
CLDND1-220ENST00000508902 CMC1Q7Z7K0 106 aa17.4■□□□□ 0.38
CLDND1-220ENST00000508902 PLD3Q8IV08 490 aa17.4■□□□□ 0.38
CLDND1-220ENST00000508902 ARHGEF39Q8N4T4 335 aa17.4■□□□□ 0.38
CLDND1-220ENST00000508902 RAB42Q8N4Z0 105 aa17.4■□□□□ 0.38
CLDND1-220ENST00000508902 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.4■□□□□ 0.38
CLDND1-220ENST00000508902 ZUFSPQ96AP4 578 aa17.4■□□□□ 0.38
CLDND1-220ENST00000508902 CLIP3Q96DZ5 547 aa17.4■□□□□ 0.38
CLDND1-220ENST00000508902 FUT8Q9BYC5 575 aa17.4■□□□□ 0.38
CLDND1-220ENST00000508902 MRPS30Q9NP92 439 aaKnown RBP17.4■□□□□ 0.38
CLDND1-220ENST00000508902 ABCF3Q9NUQ8 709 aa17.4■□□□□ 0.38
CLDND1-220ENST00000508902 ZNF462Q96JM2 2506 aa17.4■□□□□ 0.38
CLDND1-220ENST00000508902 FITM1A5D6W6 292 aa17.39■□□□□ 0.37
CLDND1-220ENST00000508902 C21orf140B9A014 251 aa17.39■□□□□ 0.37
CLDND1-220ENST00000508902 ERVH48-1M5A8F1 160 aa17.39■□□□□ 0.37
CLDND1-220ENST00000508902 HAT1O14929 419 aa17.39■□□□□ 0.37
CLDND1-220ENST00000508902 P2RX6O15547 441 aa17.39■□□□□ 0.37
CLDND1-220ENST00000508902 KATNA1O75449 491 aa17.39■□□□□ 0.37
CLDND1-220ENST00000508902 CMPK1P30085 196 aa17.39■□□□□ 0.37
CLDND1-220ENST00000508902 HSD17B2P37059 387 aa17.39■□□□□ 0.37
CLDND1-220ENST00000508902 VSX2P58304 361 aaPredicted RBP17.39■□□□□ 0.37
CLDND1-220ENST00000508902 NAE1Q13564 534 aa17.39■□□□□ 0.37
CLDND1-220ENST00000508902 LY6DQ14210 128 aa17.39■□□□□ 0.37
CLDND1-220ENST00000508902 TSNQ15631 228 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms