RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 CCDC134Q9H6E4 229 aa8.34□□□□□ -1.07
USP46-207ENST00000508499 KCNK9Q9NPC2 374 aa8.34□□□□□ -1.07
USP46-207ENST00000508499 C1GALT1Q9NS00 363 aa8.34□□□□□ -1.07
USP46-207ENST00000508499 KCNK4Q9NYG8 393 aa8.34□□□□□ -1.07
USP46-207ENST00000508499 UTP6Q9NYH9 597 aaKnown RBP8.34□□□□□ -1.07
USP46-207ENST00000508499 OPTCQ9UBM4 332 aa8.34□□□□□ -1.07
USP46-207ENST00000508499 HAO1Q9UJM8 370 aa8.34□□□□□ -1.07
USP46-207ENST00000508499 TDRKHQ9Y2W6 561 aaKnown RBP8.34□□□□□ -1.07
USP46-207ENST00000508499 KCNE2Q9Y6J6 123 aa8.34□□□□□ -1.07
USP46-207ENST00000508499 GVINP1Q7Z2Y8 2422 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 TRBV23OR9-2A0A075B6M9 112 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 A0A1W2PQM1 296 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 TLCD2A6NGC4 264 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 TMEM114B3SHH9 223 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 WFS1O76024 890 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 MLYCDO95822 493 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 FGF3P11487 239 aaPredicted RBP8.33□□□□□ -1.08
USP46-207ENST00000508499 CHN1P15882 459 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 EPORP19235 508 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 PRDX3P30048 256 aaKnown RBP8.33□□□□□ -1.08
USP46-207ENST00000508499 PEBP1P30086 187 aaKnown RBP8.33□□□□□ -1.08
USP46-207ENST00000508499 ALDH3A1P30838 453 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 HPDP32754 393 aaPredicted RBP8.33□□□□□ -1.08
USP46-207ENST00000508499 DAB2P98082 770 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 CDC16Q13042 620 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 BIRC2Q13490 618 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 NAE1Q13564 534 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 TRA2AQ13595 282 aaKnown RBP eCLIP8.33□□□□□ -1.08
USP46-207ENST00000508499 FASTKQ14296 549 aaKnown RBP8.33□□□□□ -1.08
USP46-207ENST00000508499 PDK4Q16654 411 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 PERM1Q5SV97 790 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 PRAMEF13Q5VWM6 474 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 LIPJQ5W064 366 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 ICE2Q659A1 982 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 ZNF425Q6IV72 752 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 TMEM71Q6P5X7 295 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 SPESP1Q6UW49 350 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 TREML4Q6UXN2 200 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 FRMD7Q6ZUT3 714 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 EFL1Q7Z2Z2 1120 aaKnown RBP8.33□□□□□ -1.08
USP46-207ENST00000508499 PRSS42Q7Z5A4 293 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 THOC6Q86W42 341 aaKnown RBP8.33□□□□□ -1.08
USP46-207ENST00000508499 C10orf107Q8IVU9 208 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 L3MBTL4Q8NA19 623 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 OR2L3Q8NG85 312 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 OR4E2Q8NGC2 313 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 OR4D9Q8NGE8 314 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 IFI44Q8TCB0 444 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 ZNF382Q96SR6 550 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 TBC1D10AQ9BXI6 508 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 DRC3Q9H069 523 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 LRRN3Q9H3W5 708 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 GSTO2Q9H4Y5 243 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 NT5DC2Q9H857 520 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 TMEM184CQ9NVA4 438 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 DNAJC11Q9NVH1 559 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 HRASLS2Q9NWW9 162 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 TOR4AQ9NXH8 423 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 ACTR10Q9NZ32 417 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 WWOXQ9NZC7 414 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 PPT2Q9UMR5 302 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 SLC22A14Q9Y267 594 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 BTRCQ9Y297 605 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.33□□□□□ -1.08
USP46-207ENST00000508499 PTPRBP23467 1997 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 RIF1Q5UIP0 2472 aaKnown RBP8.33□□□□□ -1.08
USP46-207ENST00000508499 DMXL1Q9Y485 3027 aa8.33□□□□□ -1.08
USP46-207ENST00000508499 ZFHX2Q9C0A1 2572 aaPredicted RBP8.32□□□□□ -1.08
USP46-207ENST00000508499 A0A0J9YY10 115 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.32□□□□□ -1.08
USP46-207ENST00000508499 OR2A25A4D2G3 310 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 OR6C74A6NCV1 312 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 NCF1BA6NI72 391 aaPredicted RBP8.32□□□□□ -1.08
USP46-207ENST00000508499 NCF1CA8MVU1 366 aaPredicted RBP8.32□□□□□ -1.08
USP46-207ENST00000508499 SNNO75324 88 aaPredicted RBP8.32□□□□□ -1.08
USP46-207ENST00000508499 RFPL3O75679 317 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 OTCP00480 354 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 SERPINE1P05121 402 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 FGF4P08620 206 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 EBLN1P0CF75 366 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 NCF1P14598 390 aaPredicted RBP8.32□□□□□ -1.08
USP46-207ENST00000508499 UGT2B7P16662 529 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 AMD1P17707 334 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 EEF1DP29692 281 aaKnown RBP8.32□□□□□ -1.08
USP46-207ENST00000508499 CCKBRP32239 447 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 HNF4AP41235 474 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 HSPA7P48741 367 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 AGTR2P50052 363 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 NAGLUP54802 743 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 PKNOX1P55347 436 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 CFHR1Q03591 330 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 CLCQ05315 142 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 ZFP36L1Q07352 338 aaKnown RBP8.32□□□□□ -1.08
USP46-207ENST00000508499 LCP2Q13094 533 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 GTF2H2Q13888 395 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 TRIP6Q15654 476 aaKnown RBP8.32□□□□□ -1.08
USP46-207ENST00000508499 TUBB8Q3ZCM7 444 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 UNC50Q53HI1 259 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 HHATQ5VTY9 493 aa8.32□□□□□ -1.08
USP46-207ENST00000508499 CDCP2Q5VXM1 449 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms