RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 FITM2Q8N6M3 262 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 DENND6BQ8NEG7 585 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 OR56A4Q8NGH8 313 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 ACTL9Q8TC94 416 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 IFI44Q8TCB0 444 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 MAPK15Q8TD08 544 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 STON2Q8WXE9 905 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 AP2M1Q96CW1 435 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 DTD2Q96FN9 168 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 PDXPQ96GD0 296 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 OXNAD1Q96HP4 312 aaPredicted RBP4.48□□□□□ -1.69
NUP54-206ENST00000508465 HIC2Q96JB3 615 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 TEKT5Q96M29 485 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 OLFM3Q96PB7 478 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 MCCC1Q96RQ3 725 aaPredicted RBP4.48□□□□□ -1.69
NUP54-206ENST00000508465 WDR24Q96S15 920 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 APOL2Q9BQE5 337 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 ADGRE3Q9BY15 652 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 OSBPL8Q9BZF1 889 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 SYNDIG1Q9H7V2 258 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 LANCL2Q9NS86 450 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 SPATS2LQ9NUQ6 558 aaKnown RBP4.48□□□□□ -1.69
NUP54-206ENST00000508465 TMEM140Q9NV12 185 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 NLGN3Q9NZ94 848 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 AMFRQ9UKV5 643 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 PADI4Q9UM07 663 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 GUCA1BQ9UMX6 200 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 R3HDM2Q9Y2K5 976 aaKnown RBP4.48□□□□□ -1.69
NUP54-206ENST00000508465 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.48□□□□□ -1.69
NUP54-206ENST00000508465 PPIL1Q9Y3C6 166 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 PCYT1BQ9Y5K3 369 aaPredicted RBP4.48□□□□□ -1.69
NUP54-206ENST00000508465 CSNK1G3Q9Y6M4 447 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 LRRK1Q38SD2 2015 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 LOC400499M0QZD8 3231 aa4.48□□□□□ -1.69
NUP54-206ENST00000508465 ANKRD36A6QL64 1941 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 PLXNB3Q9ULL4 1909 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 ITPR1Q14643 2758 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 A0A1W2PQ67 120 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 CAPN8A6NHC0 703 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 SRRM3A6NNA2 597 aaPredicted RBP4.47□□□□□ -1.69
NUP54-206ENST00000508465 BTNL10A8MVZ5 291 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 B4DGG1 531 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 KCNN4O15554 427 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 UGT1A9O60656 530 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 NDST3O95803 873 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 EML2O95834 649 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 MT-CO3P00414 261 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 SOD1P00441 154 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 FGF1P05230 155 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 PTMAP06454 111 aaKnown RBP4.47□□□□□ -1.69
NUP54-206ENST00000508465 HOXC4P09017 264 aaPredicted RBP4.47□□□□□ -1.69
NUP54-206ENST00000508465 CPEP16870 476 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 BPIP17213 487 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 TPH1P17752 444 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 UGT1A6P19224 532 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 UGT1A1P22309 533 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 UGT1A4P22310 534 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 ACP1P24666 158 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 CTNNA2P26232 953 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 ITPKBP27987 946 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 CA5AP35218 305 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 CTNNA1P35221 906 aaKnown RBP4.47□□□□□ -1.69
NUP54-206ENST00000508465 UGT1A3P35503 534 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 UGT1A5P35504 534 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 DUSP3P51452 185 aaPredicted RBP4.47□□□□□ -1.69
NUP54-206ENST00000508465 MAPK10P53779 464 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 MAZP56270 477 aaKnown RBP4.47□□□□□ -1.69
NUP54-206ENST00000508465 RWDD2BP57060 319 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 OR1D5P58170 312 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 RPL26P61254 145 aaKnown RBP4.47□□□□□ -1.69
NUP54-206ENST00000508465 CCL7P80098 99 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 CDK3Q00526 305 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 E2F1Q01094 437 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 OTUD4Q01804 1114 aaKnown RBP4.47□□□□□ -1.69
NUP54-206ENST00000508465 CDK18Q07002 472 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 SNX1Q13596 522 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 ELOCQ15369 112 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 CCDC70Q6NSX1 233 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 VWA1Q6PCB0 445 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 SLC30A9Q6PML9 568 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 KDELC1Q6UW63 502 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 BBS12Q6ZW61 710 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 BZW1Q7L1Q6 419 aaKnown RBP4.47□□□□□ -1.69
NUP54-206ENST00000508465 PEG10Q86TG7 708 aaKnown RBP4.47□□□□□ -1.69
NUP54-206ENST00000508465 PRUNE1Q86TP1 453 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 TMPRSS12Q86WS5 348 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 VSIG1Q86XK7 387 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 GKN2Q86XP6 184 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 NRROSQ86YC3 692 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 RAVER1Q8IY67 606 aaKnown RBP4.47□□□□□ -1.69
NUP54-206ENST00000508465 NRSN1Q8IZ57 195 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 NDUFAF2Q8N183 169 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 GALNT15Q8N3T1 639 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 FAM71DQ8N9W8 422 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 GPR26Q8NDV2 337 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 IPMKQ8NFU5 416 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 CCDC110Q8TBZ0 833 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 NAT14Q8WUY8 206 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 PATE1Q8WXA2 126 aa4.47□□□□□ -1.69
NUP54-206ENST00000508465 HTR3CQ8WXA8 447 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms