RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 MYO1CO00159 1063 aa12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 PFDN6O15212 129 aa12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 SRPX2O60687 465 aaPredicted RBP12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 SEMA7AO75326 666 aa12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 PSIP1O75475 530 aaKnown RBP12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 IPO13O94829 963 aaKnown RBP12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 AGFG2O95081 481 aa12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 F7P08709 466 aaPredicted RBP12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 RNF224P0DH78 156 aa12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 OR1D4P47884 311 aa12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 WASHC2DQ5SRD0 308 aa12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 ZNF470Q6ECI4 717 aa12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 NEPROQ6NW34 567 aa12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 KIRREL2Q6UWL6 708 aa12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 SHISA6Q6ZSJ9 500 aa12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 SPNS2Q8IVW8 549 aa12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 IQCKQ8N0W5 287 aa12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 OR4N4Q8N0Y3 316 aa12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 SNRNP40Q96DI7 357 aaKnown RBP12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 C10orf90Q96M02 699 aa12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 ZFYVE21Q9BQ24 234 aa12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 MESP1Q9BRJ9 268 aa12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 ACAT2Q9BWD1 397 aa12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 SOX17Q9H6I2 414 aaPredicted RBP12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 ATP13A2Q9NQ11 1180 aa12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 INTS10Q9NVR2 710 aaKnown RBP12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 NXT1Q9UKK6 140 aaKnown RBP12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 PPP2R2CQ9Y2T4 447 aa12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 MED16Q9Y2X0 877 aa12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 MAU2Q9Y6X3 613 aa12.43□□□□□ -0.42
HMGCS1-205ENST00000508319 IGKV1-8A0A0C4DH67 115 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 ZCWPW2A0A1B0GU75 182 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 HYKKA2RU49 373 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 VSTM2BA6NLU5 285 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 KLHL41O60662 606 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 KRT14P02533 472 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 PIM1P11309 404 aaPredicted RBP12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 PKMP14618 531 aaKnown RBP12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 PAMP19021 973 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 CHRM3P20309 590 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 ITGA3P26006 1051 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 VARSP26640 1264 aaKnown RBP12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 MAGEA3P43357 314 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 CLCN7P51798 805 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 SARNPP82979 210 aaKnown RBP12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 DHX34Q14147 1143 aaKnown RBP12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 PRTGQ2VWP7 1150 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 KLHL38Q2WGJ6 581 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 FAM214AQ32MH5 1076 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 ANKRD20A4Q4UJ75 823 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 CRB2Q5IJ48 1285 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 PRAMEF13Q5VWM6 474 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 CASC4Q6P4E1 433 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 SUSD1Q6UWL2 747 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 Q6ZS92 163 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 AGGF1Q8N302 714 aaeCLIP12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 RASGEF1CQ8N431 466 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 MCUQ8NE86 351 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 OR11G2Q8NGC1 345 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 OR9A1PQ8NGU1 263 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 ZNF669Q96BR6 464 aaPredicted RBP12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 SERPINB12Q96P63 405 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 SLC30A3Q99726 388 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 DPH7Q9BTV6 452 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 SLC29A3Q9BZD2 475 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 SAMD15Q9P1V8 674 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 MAP10Q9P2G4 905 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 VPS9D1Q9Y2B5 631 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 NEU2Q9Y3R4 380 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 CSAG2Q9Y5P2 127 aa12.42□□□□□ -0.42
HMGCS1-205ENST00000508319 E5RI56 91 aa12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 USP1O94782 785 aa12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 MLNP12872 115 aa12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 CMPK1P30085 196 aa12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 KLC1Q07866 573 aa12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 ARHGAP19Q14CB8 494 aa12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 NAA25Q14CX7 972 aa12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 CYP1B1Q16678 543 aa12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 EIF2S3LQ2VIR3 472 aaKnown RBP12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 TUBB8Q3ZCM7 444 aa12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 ZNF425Q6IV72 752 aa12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 PRMT9Q6P2P2 845 aa12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 FBXO42Q6P3S6 717 aa12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 CUZD1Q86UP6 607 aa12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 DENND6AQ8IWF6 608 aa12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 REXO1L1PQ8IX06 675 aa12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 CISD2Q8N5K1 135 aaKnown RBP12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 SSC4DQ8WTU2 575 aa12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 SMPDL3AQ92484 453 aa12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 TM9SF4Q92544 642 aa12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 KCNJ9Q92806 393 aa12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 MS4A14Q96JA4 679 aa12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 BARD1Q99728 777 aaKnown RBP12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 PLCD4Q9BRC7 762 aa12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 ILKAPQ9H0C8 392 aaPredicted RBP12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 LRRC4CQ9HCJ2 640 aa12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 XAB2Q9HCS7 855 aaKnown RBP12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 FAM114A2Q9NRY5 505 aa12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 SEMA3GQ9NS98 782 aa12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 ASF1BQ9NVP2 202 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms