RNA–Protein interactions for RNA: ENST00000507655.5

SSBP2-208, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-208ENST00000507655 OR2A25A4D2G3 310 aa17.3■□□□□ 0.36
SSBP2-208ENST00000507655 CTAGE15A4D2H0 777 aa17.3■□□□□ 0.36
SSBP2-208ENST00000507655 ZSCAN9O15535 394 aaPredicted RBP17.3■□□□□ 0.36
SSBP2-208ENST00000507655 CTSVO60911 334 aa17.3■□□□□ 0.36
SSBP2-208ENST00000507655 CAPN1P07384 714 aa17.3■□□□□ 0.36
SSBP2-208ENST00000507655 CTAGE8P0CG41 777 aa17.3■□□□□ 0.36
SSBP2-208ENST00000507655 ZNF37AP17032 561 aaPredicted RBP17.3■□□□□ 0.36
SSBP2-208ENST00000507655 RPA3P35244 121 aaPredicted RBP17.3■□□□□ 0.36
SSBP2-208ENST00000507655 PRDX1Q06830 199 aaKnown RBP17.3■□□□□ 0.36
SSBP2-208ENST00000507655 TBR1Q16650 682 aa17.3■□□□□ 0.36
SSBP2-208ENST00000507655 PHKG1Q16816 387 aa17.3■□□□□ 0.36
SSBP2-208ENST00000507655 TAF1BQ53T94 588 aaPredicted RBP17.3■□□□□ 0.36
SSBP2-208ENST00000507655 ICE2Q659A1 982 aa17.3■□□□□ 0.36
SSBP2-208ENST00000507655 TMEM207Q6UWW9 146 aa17.3■□□□□ 0.36
SSBP2-208ENST00000507655 RNF44Q7L0R7 432 aa17.3■□□□□ 0.36
SSBP2-208ENST00000507655 CTAGE6Q86UF2 777 aa17.3■□□□□ 0.36
SSBP2-208ENST00000507655 CTAGE4Q8IX94 777 aa17.3■□□□□ 0.36
SSBP2-208ENST00000507655 SLC39A7Q92504 469 aa17.3■□□□□ 0.36
SSBP2-208ENST00000507655 EXTL1Q92935 676 aa17.3■□□□□ 0.36
SSBP2-208ENST00000507655 CCDC138Q96M89 665 aa17.3■□□□□ 0.36
SSBP2-208ENST00000507655 CPNE1Q99829 537 aa17.3■□□□□ 0.36
SSBP2-208ENST00000507655 DPH7Q9BTV6 452 aa17.3■□□□□ 0.36
SSBP2-208ENST00000507655 SLC7A5P2Q9GIP4 190 aa17.3■□□□□ 0.36
SSBP2-208ENST00000507655 LRRC4CQ9HCJ2 640 aa17.3■□□□□ 0.36
SSBP2-208ENST00000507655 MRPS30Q9NP92 439 aaKnown RBP17.3■□□□□ 0.36
SSBP2-208ENST00000507655 STOX2Q9P2F5 926 aaPredicted RBP17.3■□□□□ 0.36
SSBP2-208ENST00000507655 TAC3Q9UHF0 121 aa17.3■□□□□ 0.36
SSBP2-208ENST00000507655 DMGDHQ9UI17 866 aaKnown RBP17.3■□□□□ 0.36
SSBP2-208ENST00000507655 SRPK3Q9UPE1 567 aa17.3■□□□□ 0.36
SSBP2-208ENST00000507655 IGKV1-8A0A0C4DH67 115 aa17.29■□□□□ 0.36
SSBP2-208ENST00000507655 NRP2O60462 931 aa17.29■□□□□ 0.36
SSBP2-208ENST00000507655 KATNA1O75449 491 aa17.29■□□□□ 0.36
SSBP2-208ENST00000507655 CREG1O75629 220 aa17.29■□□□□ 0.36
SSBP2-208ENST00000507655 CCNDBP1O95273 360 aa17.29■□□□□ 0.36
SSBP2-208ENST00000507655 RAB40ALP0C0E4 278 aa17.29■□□□□ 0.36
SSBP2-208ENST00000507655 PTPN4P29074 926 aa17.29■□□□□ 0.36
SSBP2-208ENST00000507655 TAS2R39P59534 338 aa17.29■□□□□ 0.36
SSBP2-208ENST00000507655 TCTE1Q5JU00 501 aa17.29■□□□□ 0.36
SSBP2-208ENST00000507655 FAM198BQ6UWH4 519 aa17.29■□□□□ 0.36
SSBP2-208ENST00000507655 ZNF655Q8N720 491 aaPredicted RBP17.29■□□□□ 0.36
SSBP2-208ENST00000507655 PROKR1Q8TCW9 393 aa17.29■□□□□ 0.36
SSBP2-208ENST00000507655 PLCD4Q9BRC7 762 aa17.29■□□□□ 0.36
SSBP2-208ENST00000507655 FAM129AQ9BZQ8 928 aa17.29■□□□□ 0.36
SSBP2-208ENST00000507655 ACTL8Q9H568 366 aa17.29■□□□□ 0.36
SSBP2-208ENST00000507655 POPDC3Q9HBV1 291 aa17.29■□□□□ 0.36
SSBP2-208ENST00000507655 BSNQ9UPA5 3926 aa17.28■□□□□ 0.36
SSBP2-208ENST00000507655 SRPX2O60687 465 aaPredicted RBP17.28■□□□□ 0.36
SSBP2-208ENST00000507655 PRKAR1AP10644 381 aa17.28■□□□□ 0.36
SSBP2-208ENST00000507655 RPS15P62841 145 aaKnown RBP17.28■□□□□ 0.36
SSBP2-208ENST00000507655 ABATP80404 500 aa17.28■□□□□ 0.36
SSBP2-208ENST00000507655 TSTA3Q13630 321 aaPredicted RBP17.28■□□□□ 0.36
SSBP2-208ENST00000507655 ZNF460Q14592 562 aa17.28■□□□□ 0.36
SSBP2-208ENST00000507655 PTCHD3Q3KNS1 767 aa17.28■□□□□ 0.36
SSBP2-208ENST00000507655 GLE1Q53GS7 698 aaKnown RBP17.28■□□□□ 0.36
SSBP2-208ENST00000507655 ZNF425Q6IV72 752 aa17.28■□□□□ 0.36
SSBP2-208ENST00000507655 C16orf46Q6P387 395 aa17.28■□□□□ 0.36
SSBP2-208ENST00000507655 MBOAT1Q6ZNC8 495 aa17.28■□□□□ 0.36
SSBP2-208ENST00000507655 CEP97Q8IW35 865 aa17.28■□□□□ 0.36
SSBP2-208ENST00000507655 ANKRD7Q92527 254 aa17.28■□□□□ 0.36
SSBP2-208ENST00000507655 GBP5Q96PP8 586 aa17.28■□□□□ 0.36
SSBP2-208ENST00000507655 RBBP8Q99708 897 aa17.28■□□□□ 0.36
SSBP2-208ENST00000507655 SELENOSQ9BQE4 189 aa17.28■□□□□ 0.36
SSBP2-208ENST00000507655 NLNQ9BYT8 704 aa17.28■□□□□ 0.36
SSBP2-208ENST00000507655 FARSAQ9Y285 508 aaKnown RBP17.28■□□□□ 0.36
SSBP2-208ENST00000507655 MTO1Q9Y2Z2 717 aaKnown RBP17.28■□□□□ 0.36
SSBP2-208ENST00000507655 SCN3AQ9NY46 2000 aa17.28■□□□□ 0.36
SSBP2-208ENST00000507655 KALRNO60229 2985 aa17.27■□□□□ 0.36
SSBP2-208ENST00000507655 A0A0J9YVX5 310 aa17.27■□□□□ 0.36
SSBP2-208ENST00000507655 FITM1A5D6W6 292 aa17.27■□□□□ 0.36
SSBP2-208ENST00000507655 WISP3O95389 354 aaPredicted RBP17.27■□□□□ 0.36
SSBP2-208ENST00000507655 ENO2P09104 434 aaPredicted RBP17.27■□□□□ 0.36
SSBP2-208ENST00000507655 FURINP09958 794 aa17.27■□□□□ 0.36
SSBP2-208ENST00000507655 HIST1H2AGP0C0S8 130 aaPredicted RBP17.27■□□□□ 0.36
SSBP2-208ENST00000507655 HIST1H2ADP20671 130 aa17.27■□□□□ 0.36
SSBP2-208ENST00000507655 AGXTP21549 392 aa17.27■□□□□ 0.36
SSBP2-208ENST00000507655 SAT1P21673 171 aa17.27■□□□□ 0.36
SSBP2-208ENST00000507655 STX2P32856 288 aa17.27■□□□□ 0.36
SSBP2-208ENST00000507655 GP5P40197 560 aa17.27■□□□□ 0.36
SSBP2-208ENST00000507655 AP1S2P56377 157 aa17.27■□□□□ 0.36
SSBP2-208ENST00000507655 RPS18P62269 152 aaKnown RBP17.27■□□□□ 0.36
SSBP2-208ENST00000507655 TBPL1P62380 186 aa17.27■□□□□ 0.36
SSBP2-208ENST00000507655 POU4F1Q01851 419 aa17.27■□□□□ 0.36
SSBP2-208ENST00000507655 RELAQ04206 551 aa17.27■□□□□ 0.36
SSBP2-208ENST00000507655 LY6DQ14210 128 aa17.27■□□□□ 0.36
SSBP2-208ENST00000507655 KBTBD12Q3ZCT8 623 aa17.27■□□□□ 0.36
SSBP2-208ENST00000507655 ATP1A1-AS1Q5TC04 95 aa17.27■□□□□ 0.36
SSBP2-208ENST00000507655 YOD1Q5VVQ6 348 aaPredicted RBP17.27■□□□□ 0.36
SSBP2-208ENST00000507655 FRMPD2BQ6IN97 320 aa17.27■□□□□ 0.36
SSBP2-208ENST00000507655 FBXO42Q6P3S6 717 aa17.27■□□□□ 0.36
SSBP2-208ENST00000507655 BORAQ6PGQ7 559 aa17.27■□□□□ 0.36
SSBP2-208ENST00000507655 AGTRAPQ6RW13 159 aa17.27■□□□□ 0.36
SSBP2-208ENST00000507655 SBSNQ6UWP8 590 aa17.27■□□□□ 0.36
SSBP2-208ENST00000507655 SYVN1Q86TM6 617 aa17.27■□□□□ 0.36
SSBP2-208ENST00000507655 PAQR7Q86WK9 346 aa17.27■□□□□ 0.36
SSBP2-208ENST00000507655 RELL1Q8IUW5 271 aa17.27■□□□□ 0.36
SSBP2-208ENST00000507655 NKAPQ8N5F7 415 aaKnown RBP17.27■□□□□ 0.36
SSBP2-208ENST00000507655 FBF1Q8TES7 1133 aa17.27■□□□□ 0.36
SSBP2-208ENST00000507655 HIST1H2AHQ96KK5 128 aa17.27■□□□□ 0.36
SSBP2-208ENST00000507655 GPR22Q99680 433 aa17.27■□□□□ 0.36
SSBP2-208ENST00000507655 HIST1H2AJQ99878 128 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms