RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 Q9H521 79 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 VPS37BQ9H9H4 285 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 NLE1Q9NVX2 485 aaPredicted RBP7.8□□□□□ -1.16
SCN1A-207ENST00000507401 KLHL3Q9UH77 587 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 RIMKLBQ9ULI2 386 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 PACSIN2Q9UNF0 486 aaPredicted RBP7.8□□□□□ -1.16
SCN1A-207ENST00000507401 R3HDM2Q9Y2K5 976 aaKnown RBP7.8□□□□□ -1.16
SCN1A-207ENST00000507401 HEBP2Q9Y5Z4 205 aa7.8□□□□□ -1.16
SCN1A-207ENST00000507401 A0A1W2PNR3 127 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 TCRBV7S2A1N4TA0A589 114 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 OR5K3A6NET4 321 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 ZNF891A8MT65 544 aaPredicted RBP7.79□□□□□ -1.16
SCN1A-207ENST00000507401 QSOX1O00391 747 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 GPR39O43194 453 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 LIASO43766 372 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 CIB2O75838 187 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 STK17BO94768 372 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 PSMG1O95456 288 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 TTC4O95801 387 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 DLGAP3O95886 979 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 RECKO95980 971 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 MT-ND3P03897 115 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 LYNP07948 512 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 SLC35G4P0C7Q5 338 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 LIFP15018 202 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 TPH1P17752 444 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 WT1P19544 449 aaPredicted RBP7.79□□□□□ -1.16
SCN1A-207ENST00000507401 TAC1P20366 129 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 MC4RP32245 332 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 FDFT1P37268 417 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 LEPRP48357 1165 aaKnown RBP7.79□□□□□ -1.16
SCN1A-207ENST00000507401 PRLHRP49683 370 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 HSD11B2P80365 405 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 TMPRSS15P98073 1019 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 MC1RQ01726 317 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 CACNG1Q06432 222 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 ASPHQ12797 758 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 CDH17Q12864 832 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 RPA4Q13156 261 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 SRSF6Q13247 344 aaKnown RBP7.79□□□□□ -1.16
SCN1A-207ENST00000507401 DCTN2Q13561 401 aaKnown RBP7.79□□□□□ -1.16
SCN1A-207ENST00000507401 LY6DQ14210 128 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 OASLQ15646 514 aaKnown RBP7.79□□□□□ -1.16
SCN1A-207ENST00000507401 CCNG2Q16589 344 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 TBR1Q16650 682 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 ZNF449Q6P9G9 518 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 ZDHHC24Q6UX98 284 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 C4orf22Q6V702 233 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 NLRP9Q7RTR0 991 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 TIPARPQ7Z3E1 657 aaKnown RBP7.79□□□□□ -1.16
SCN1A-207ENST00000507401 ZNF554Q86TJ5 538 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 SLC13A5Q86YT5 568 aaPredicted RBP7.79□□□□□ -1.16
SCN1A-207ENST00000507401 TMEM126BQ8IUX1 230 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 EXD3Q8N9H8 876 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 FBXO25Q8TCJ0 367 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 HM13Q8TCT9 377 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 C17orf50Q8WW18 174 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 JPH3Q8WXH2 748 aaPredicted RBP7.79□□□□□ -1.16
SCN1A-207ENST00000507401 JADE3Q92613 823 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 RSC1A1Q92681 617 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 PEX13Q92968 403 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 UTP4Q969X6 686 aaKnown RBP7.79□□□□□ -1.16
SCN1A-207ENST00000507401 MCUR1Q96AQ8 359 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 ERP27Q96DN0 273 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 SLC41A2Q96JW4 573 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 CTRCQ99895 268 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 AP1M1Q9BXS5 423 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 WWP1Q9H0M0 922 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 ADNPQ9H2P0 1102 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 TFB2MQ9H5Q4 396 aaKnown RBP7.79□□□□□ -1.16
SCN1A-207ENST00000507401 KIR3DX1Q9H7L2 352 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 APMAPQ9HDC9 416 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 PDE7BQ9NP56 450 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 ENAMQ9NRM1 1142 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 IMP3Q9NV31 184 aaKnown RBP7.79□□□□□ -1.16
SCN1A-207ENST00000507401 HRASLS2Q9NWW9 162 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 GRHL1Q9NZI5 618 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 SLC24A2Q9UI40 661 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 PSMD13Q9UNM6 376 aa7.79□□□□□ -1.16
SCN1A-207ENST00000507401 DRG1Q9Y295 367 aaKnown RBP7.79□□□□□ -1.16
SCN1A-207ENST00000507401 MTO1Q9Y2Z2 717 aaKnown RBP7.79□□□□□ -1.16
SCN1A-207ENST00000507401 ZNF462Q96JM2 2506 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 AP3B1O00203 1094 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 MATN2O00339 956 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 PEX1O43933 1283 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 EDF1O60869 148 aaKnown RBP7.78□□□□□ -1.16
SCN1A-207ENST00000507401 POLBP06746 335 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 HOXB4P17483 251 aaPredicted RBP7.78□□□□□ -1.16
SCN1A-207ENST00000507401 ADRA1DP25100 572 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 ACRV1P26436 265 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 NSG1P42857 185 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 SEPHS1P49903 392 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 PLOD1Q02809 727 aaPredicted RBP7.78□□□□□ -1.16
SCN1A-207ENST00000507401 ACY1Q03154 408 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 TNP2Q05952 138 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 FOXM1Q08050 763 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 POU6F1Q14863 301 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 PLCL1Q15111 1095 aa7.78□□□□□ -1.16
SCN1A-207ENST00000507401 ZNF658BQ4V348 819 aaPredicted RBP7.78□□□□□ -1.16
SCN1A-207ENST00000507401 ZRANB3Q5FWF4 1079 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms