RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 SPSB1Q96BD6 273 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 CENPTQ96BT3 561 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 POM121L2Q96KW2 1035 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 ZNF558Q96NG5 402 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 LRRC3BQ96PB8 259 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 EGLN1Q9GZT9 426 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 TRPV4Q9HBA0 871 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 MAN2C1Q9NTJ4 1040 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 EXOGQ9Y2C4 368 aaKnown RBP3.36□□□□□ -1.87
CHD1-203ENST00000505657 A0A1W2PR80 420 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 CLDN4O14493 209 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 ARHGEF9O43307 516 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 PLOD3O60568 738 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 GLRA3O75311 464 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 ATP6AP2O75787 350 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 TBX6O95947 436 aaPredicted RBP3.35□□□□□ -1.87
CHD1-203ENST00000505657 GSRP00390 522 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 EPCAMP16422 314 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 LHCGRP22888 699 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 VAMP7P51809 220 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 LUMP51884 338 aaPredicted RBP3.35□□□□□ -1.87
CHD1-203ENST00000505657 CAMK2DQ13557 499 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 KCTD2Q14681 263 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 PHKG1Q16816 387 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 GPR33Q49SQ1 333 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 TLK2Q86UE8 772 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 HOGA1Q86XE5 327 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 TTC30BQ8N4P2 665 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 ZNF485Q8NCK3 441 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 MAPK1IP1LQ8NDC0 245 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 ROBO4Q8WZ75 1007 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 RMDN1Q96DB5 314 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 ZNF486Q96H40 463 aaPredicted RBP3.35□□□□□ -1.87
CHD1-203ENST00000505657 C4orf45Q96LM5 186 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 CFAP57Q96MR6 1250 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 NECTIN4Q96NY8 510 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 CLEC7AQ9BXN2 247 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 FZD8Q9H461 694 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 OR6C2Q9NZP2 312 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 NFKBIL1Q9UBC1 381 aaPredicted RBP3.35□□□□□ -1.87
CHD1-203ENST00000505657 R4GN57 208 aa3.35□□□□□ -1.87
CHD1-203ENST00000505657 TRBV5-5A0A0J9YX44 114 aa3.34□□□□□ -1.87
CHD1-203ENST00000505657 SNURFLB1AK76 121 aa3.34□□□□□ -1.87
CHD1-203ENST00000505657 CDK2AP2O75956 126 aa3.34□□□□□ -1.87
CHD1-203ENST00000505657 BAG3O95817 575 aa3.34□□□□□ -1.87
CHD1-203ENST00000505657 SAGP10523 405 aaPredicted RBP3.34□□□□□ -1.87
CHD1-203ENST00000505657 TYMPP19971 482 aa3.34□□□□□ -1.87
CHD1-203ENST00000505657 CYP2A7P20853 494 aa3.34□□□□□ -1.87
CHD1-203ENST00000505657 PAX9P55771 341 aa3.34□□□□□ -1.87
CHD1-203ENST00000505657 GSDMDP57764 484 aa3.34□□□□□ -1.87
CHD1-203ENST00000505657 CSNK2BP67870 215 aa3.34□□□□□ -1.87
CHD1-203ENST00000505657 KLC1Q07866 573 aa3.34□□□□□ -1.87
CHD1-203ENST00000505657 MZT1Q08AG7 82 aa3.34□□□□□ -1.87
CHD1-203ENST00000505657 RASGEF1BQ0VAM2 473 aa3.34□□□□□ -1.87
CHD1-203ENST00000505657 DRP2Q13474 957 aa3.34□□□□□ -1.87
CHD1-203ENST00000505657 PDLIM3Q53GG5 364 aaPredicted RBP3.34□□□□□ -1.87
CHD1-203ENST00000505657 CST9LP1Q5W188 147 aa3.34□□□□□ -1.87
CHD1-203ENST00000505657 KRT80Q6KB66 452 aa3.34□□□□□ -1.87
CHD1-203ENST00000505657 MAML2Q8IZL2 1156 aaPredicted RBP3.34□□□□□ -1.87
CHD1-203ENST00000505657 ZNF614Q8N883 585 aa3.34□□□□□ -1.87
CHD1-203ENST00000505657 NIPA2Q8N8Q9 360 aa3.34□□□□□ -1.87
CHD1-203ENST00000505657 Q8NFD4 153 aa3.34□□□□□ -1.87
CHD1-203ENST00000505657 GPRC5AQ8NFJ5 357 aa3.34□□□□□ -1.87
CHD1-203ENST00000505657 APOBEC4Q8WW27 367 aaKnown RBP3.34□□□□□ -1.87
CHD1-203ENST00000505657 TAF15Q92804 592 aaKnown RBP eCLIP3.34□□□□□ -1.87
CHD1-203ENST00000505657 C18orf12Q96KH6 178 aa3.34□□□□□ -1.87
CHD1-203ENST00000505657 LINC00479Q96M42 142 aa3.34□□□□□ -1.87
CHD1-203ENST00000505657 SPATA33Q96N06 139 aa3.34□□□□□ -1.87
CHD1-203ENST00000505657 NAA11Q9BSU3 229 aaPredicted RBP3.34□□□□□ -1.87
CHD1-203ENST00000505657 PRRG4Q9BZD6 226 aa3.34□□□□□ -1.87
CHD1-203ENST00000505657 ZMYND12Q9H0C1 365 aa3.34□□□□□ -1.87
CHD1-203ENST00000505657 CCDC177Q9NQR7 707 aaPredicted RBP3.34□□□□□ -1.87
CHD1-203ENST00000505657 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.34□□□□□ -1.87
CHD1-203ENST00000505657 ERAP1Q9NZ08 941 aa3.34□□□□□ -1.87
CHD1-203ENST00000505657 TBC1D7Q9P0N9 293 aa3.34□□□□□ -1.87
CHD1-203ENST00000505657 MYH15Q9Y2K3 1946 aa3.33□□□□□ -1.88
CHD1-203ENST00000505657 MEX3AA1L020 520 aaKnown RBP3.33□□□□□ -1.88
CHD1-203ENST00000505657 C15orf61A6NNL5 157 aa3.33□□□□□ -1.88
CHD1-203ENST00000505657 HMGB1P1B2RPK0 211 aaPredicted RBP3.33□□□□□ -1.88
CHD1-203ENST00000505657 EPHB6O15197 1021 aa3.33□□□□□ -1.88
CHD1-203ENST00000505657 EXTL3O43909 919 aa3.33□□□□□ -1.88
CHD1-203ENST00000505657 ZSCAN5DPP0CG00 497 aa3.33□□□□□ -1.88
CHD1-203ENST00000505657 GP1BBP13224 206 aa3.33□□□□□ -1.88
CHD1-203ENST00000505657 ALDH1B1P30837 517 aa3.33□□□□□ -1.88
CHD1-203ENST00000505657 MMP12P39900 470 aa3.33□□□□□ -1.88
CHD1-203ENST00000505657 KRTAP10-12P60413 245 aa3.33□□□□□ -1.88
CHD1-203ENST00000505657 COG2Q14746 738 aa3.33□□□□□ -1.88
CHD1-203ENST00000505657 NONOQ15233 471 aaKnown RBP eCLIP3.33□□□□□ -1.88
CHD1-203ENST00000505657 E2F5Q15329 346 aa3.33□□□□□ -1.88
CHD1-203ENST00000505657 ZNF74Q16587 644 aa3.33□□□□□ -1.88
CHD1-203ENST00000505657 CTU2Q2VPK5 515 aaKnown RBP3.33□□□□□ -1.88
CHD1-203ENST00000505657 LCN1P1Q5VSP4 162 aa3.33□□□□□ -1.88
CHD1-203ENST00000505657 OR4A47Q6IF82 309 aa3.33□□□□□ -1.88
CHD1-203ENST00000505657 FIP1L1Q6UN15 594 aaKnown RBP3.33□□□□□ -1.88
CHD1-203ENST00000505657 PPP1R21Q6ZMI0 780 aa3.33□□□□□ -1.88
CHD1-203ENST00000505657 G2E3Q7L622 706 aa3.33□□□□□ -1.88
CHD1-203ENST00000505657 LSMEM2Q8N112 164 aa3.33□□□□□ -1.88
CHD1-203ENST00000505657 RASGEF1AQ8N9B8 481 aa3.33□□□□□ -1.88
CHD1-203ENST00000505657 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.33□□□□□ -1.88
CHD1-203ENST00000505657 CAMKVQ8NCB2 501 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms