RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 PTPN14Q15678 1187 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 UGP2Q16851 508 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 ODF4Q2M2E3 257 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 ITPRIPL2Q3MIP1 535 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 MCMDC2Q4G0Z9 681 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 ZC2HC1CQ53FD0 456 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 TCTE1Q5JU00 501 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 SPDYCQ5MJ68 293 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 ALKBH5Q6P6C2 394 aaKnown RBP2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 IYDQ6PHW0 289 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 ABRAXAS1Q6UWZ7 409 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 C11orf57Q6ZUT1 292 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 TRMT1LQ7Z2T5 733 aaKnown RBP2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 NUDT13Q86X67 352 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 DCUN1D3Q8IWE4 304 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 ZNF619Q8N2I2 560 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 STPG4Q8N801 248 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 WDSUB1Q8N9V3 476 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 KLHDC9Q8NEP7 349 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 OR11H4Q8NGC9 324 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 CTCFLQ8NI51 663 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 LRRC8CQ8TDW0 803 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 TM9SF4Q92544 642 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 EXOC4Q96A65 974 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 TMEM143Q96AN5 459 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 RMDN2Q96LZ7 410 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 NODALQ96S42 347 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 RAD9AQ99638 391 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 URM1Q9BTM9 101 aaKnown RBP2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 FSD1Q9BTV5 496 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 THUMPD3Q9BV44 507 aaKnown RBP2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 ACAT2Q9BWD1 397 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 GTPBP2Q9BX10 602 aaKnown RBP2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 PRRG4Q9BZD6 226 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 LAT2Q9GZY6 243 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 MIS12Q9H081 205 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 MMP28Q9H239 520 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 CDH20Q9HBT6 801 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 ZNF334Q9HCZ1 680 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 CHCHD3Q9NX63 227 aaKnown RBP2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 POLLQ9UGP5 575 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 ZDHHC2Q9UIJ5 367 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 RIPK3Q9Y572 518 aa2.23□□□□□ -2.05
HMGB1P35-201ENST00000503360 IGLV9-49A0A0B4J1Y8 123 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 TRAV34A0A0B4J273 112 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 LOC101059948A0A1B0GTJ6 334 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 A0A1W2PN81 502 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 TRIM64CA6NLI5 447 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 CCDC188H7C350 402 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 CLIC2O15247 247 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 ZBTB14O43829 449 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 TPM2P07951 284 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 IRF2P14316 349 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 TCF4P15884 667 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 EFNA1P20827 205 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 CDH3P22223 829 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 CA4P22748 312 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 ACAT1P24752 427 aaKnown RBP2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 CDC25CP30307 473 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 HOXC8P31273 242 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 TLX1P31314 330 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 TCF7P36402 384 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 CHRNA7P36544 502 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 PRKCIP41743 596 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 CD86P42081 329 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 BMXP51813 675 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 LINC01547P58512 204 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 B3GALT5-AS1P59052 145 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 ITGA7Q13683 1181 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 TAF7Q15545 349 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 SMU1Q2TAY7 513 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 UGT3A2Q3SY77 523 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 C6orf136Q5SQH8 315 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 CYP4A22Q5TCH4 519 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 SFMBT2Q5VUG0 894 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 SLC35E4Q6ICL7 350 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 RAB12Q6IQ22 244 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 ENPP7Q6UWV6 458 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 RBMS3Q6XE24 437 aaKnown RBP2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 PIWIL3Q7Z3Z3 882 aaKnown RBP2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 SH2D6Q7Z4S9 175 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 SPATA21Q7Z572 469 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 GLRX5Q86SX6 157 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 TRPT1Q86TN4 253 aaKnown RBP2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 ISCA2Q86U28 154 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 RTN4RL2Q86UN3 420 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 FAM219AQ8IW50 185 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 MMD2Q8IY49 270 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 LGI2Q8N0V4 545 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 EID3Q8N140 333 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 ZNF843Q8N446 348 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 MAPKAPK5-AS1Q8N8E1 139 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 ZNF383Q8NA42 475 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 VANGL1Q8TAA9 524 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 PHLDA1Q8WV24 401 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 FCAMRQ8WWV6 532 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 TAF4BQ92750 862 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 PTP4A1Q93096 173 aa2.22□□□□□ -2.05
HMGB1P35-201ENST00000503360 CABS1Q96KC9 395 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms