RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 TRAP1Q12931 704 aaKnown RBP21.29■■□□□ 1
PTPN13-205ENST00000502971 TRIM25Q14258 630 aaKnown RBP21.29■■□□□ 1
PTPN13-205ENST00000502971 TIGD2Q4W5G0 525 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 PYCR3Q53H96 274 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 ATG9BQ674R7 924 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 DPP10Q8N608 796 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 RNF148Q8N7C7 305 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 EFCAB11Q9BUY7 163 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 TRIT1Q9H3H1 467 aaKnown RBP21.29■■□□□ 1
PTPN13-205ENST00000502971 DUSP12Q9UNI6 340 aa21.29■■□□□ 1
PTPN13-205ENST00000502971 ACOT8O14734 319 aa21.28■■□□□ 1
PTPN13-205ENST00000502971 ANPEPP15144 967 aa21.28■■□□□ 1
PTPN13-205ENST00000502971 PTDSS1P48651 473 aaKnown RBP21.28■■□□□ 1
PTPN13-205ENST00000502971 CLCNKAP51800 687 aa21.28■■□□□ 1
PTPN13-205ENST00000502971 MS4A2Q01362 244 aa21.28■■□□□ 1
PTPN13-205ENST00000502971 PTGR1Q14914 329 aa21.28■■□□□ 1
PTPN13-205ENST00000502971 PAGE2BQ5JRK9 111 aa21.28■■□□□ 1
PTPN13-205ENST00000502971 PAGE3Q5JUK9 113 aa21.28■■□□□ 1
PTPN13-205ENST00000502971 PRR23BQ6ZRT6 265 aa21.28■■□□□ 1
PTPN13-205ENST00000502971 TMPRSS11BQ86T26 416 aa21.28■■□□□ 1
PTPN13-205ENST00000502971 TBC1D21Q8IYX1 336 aa21.28■■□□□ 1
PTPN13-205ENST00000502971 SLC5A11Q8WWX8 675 aa21.28■■□□□ 1
PTPN13-205ENST00000502971 FCRL1Q96LA6 429 aa21.28■■□□□ 1
PTPN13-205ENST00000502971 HAUS8Q9BT25 410 aa21.28■■□□□ 1
PTPN13-205ENST00000502971 IL1RL2Q9HB29 575 aa21.28■■□□□ 1
PTPN13-205ENST00000502971 SPATA6Q9NWH7 488 aaPredicted RBP21.28■■□□□ 1
PTPN13-205ENST00000502971 SPATA7Q9P0W8 599 aa21.28■■□□□ 1
PTPN13-205ENST00000502971 SUFUQ9UMX1 484 aa21.28■■□□□ 1
PTPN13-205ENST00000502971 MYO10Q9HD67 2058 aa21.28■■□□□ 1
PTPN13-205ENST00000502971 PRORSD1PA6NEY8 169 aa21.27■■□□□ 1
PTPN13-205ENST00000502971 FPGTO14772 594 aa21.27■■□□□ 1
PTPN13-205ENST00000502971 IL6P05231 212 aa21.27■■□□□ 1
PTPN13-205ENST00000502971 C1GALT1C1LP0DN25 315 aa21.27■■□□□ 1
PTPN13-205ENST00000502971 AMD1P17707 334 aa21.27■■□□□ 1
PTPN13-205ENST00000502971 ACSL1P33121 698 aa21.27■■□□□ 1
PTPN13-205ENST00000502971 CLDN8P56748 225 aa21.27■■□□□ 1
PTPN13-205ENST00000502971 LAPTM5Q13571 262 aa21.27■■□□□ 1
PTPN13-205ENST00000502971 TSTA3Q13630 321 aaPredicted RBP21.27■■□□□ 1
PTPN13-205ENST00000502971 MED27Q6P2C8 311 aa21.27■■□□□ 1
PTPN13-205ENST00000502971 SUSD1Q6UWL2 747 aa21.27■■□□□ 1
PTPN13-205ENST00000502971 LCTLQ6UWM7 567 aa21.27■■□□□ 1
PTPN13-205ENST00000502971 APIPQ96GX9 242 aa21.27■■□□□ 1
PTPN13-205ENST00000502971 SLC39A3Q9BRY0 314 aa21.27■■□□□ 1
PTPN13-205ENST00000502971 POLMQ9NP87 494 aaPredicted RBP21.27■■□□□ 1
PTPN13-205ENST00000502971 VPS29Q9UBQ0 182 aa21.27■■□□□ 1
PTPN13-205ENST00000502971 TDRKHQ9Y2W6 561 aaKnown RBP21.27■■□□□ 1
PTPN13-205ENST00000502971 DOCK9Q9BZ29 2069 aa21.27■■□□□ 1
PTPN13-205ENST00000502971 PRR19A6NJB7 356 aa21.26■□□□□ 0.99
PTPN13-205ENST00000502971 MAP3K7O43318 606 aa21.26■□□□□ 0.99
PTPN13-205ENST00000502971 CD72P21854 359 aa21.26■□□□□ 0.99
PTPN13-205ENST00000502971 SLC6A2P23975 617 aa21.26■□□□□ 0.99
PTPN13-205ENST00000502971 ERFP50548 548 aa21.26■□□□□ 0.99
PTPN13-205ENST00000502971 CYP2A13Q16696 494 aa21.26■□□□□ 0.99
PTPN13-205ENST00000502971 HIST2H2ACQ16777 129 aaPredicted RBP21.26■□□□□ 0.99
PTPN13-205ENST00000502971 HIST2H2AA3Q6FI13 130 aa21.26■□□□□ 0.99
PTPN13-205ENST00000502971 SLC15A3Q8IY34 581 aa21.26■□□□□ 0.99
PTPN13-205ENST00000502971 HIPK4Q8NE63 616 aa21.26■□□□□ 0.99
PTPN13-205ENST00000502971 OR7G3Q8NG95 312 aa21.26■□□□□ 0.99
PTPN13-205ENST00000502971 CLMPQ9H6B4 373 aa21.26■□□□□ 0.99
PTPN13-205ENST00000502971 CD93Q9NPY3 652 aa21.26■□□□□ 0.99
PTPN13-205ENST00000502971 NDRG2Q9UN36 371 aaKnown RBP21.26■□□□□ 0.99
PTPN13-205ENST00000502971 C15orf38-AP3S2A0A0A6YYH1 394 aa21.26■□□□□ 0.99
PTPN13-205ENST00000502971 C19orf67A6NJJ6 358 aa21.26■□□□□ 0.99
PTPN13-205ENST00000502971 TCN1P20061 433 aaPredicted RBP21.26■□□□□ 0.99
PTPN13-205ENST00000502971 HNRNPA2B1P22626 353 aaKnown RBP21.26■□□□□ 0.99
PTPN13-205ENST00000502971 RPL10P27635 214 aaKnown RBP21.26■□□□□ 0.99
PTPN13-205ENST00000502971 CLNS1AP54105 237 aaKnown RBP21.26■□□□□ 0.99
PTPN13-205ENST00000502971 MLF2Q15773 248 aaPredicted RBP21.26■□□□□ 0.99
PTPN13-205ENST00000502971 PRAMEF14Q5SWL7 426 aa21.26■□□□□ 0.99
PTPN13-205ENST00000502971 PRAMEF13Q5VWM6 474 aa21.26■□□□□ 0.99
PTPN13-205ENST00000502971 NXPE4Q6UWF7 544 aa21.26■□□□□ 0.99
PTPN13-205ENST00000502971 ARPINQ7Z6K5 226 aa21.26■□□□□ 0.99
PTPN13-205ENST00000502971 PYDC1Q8WXC3 89 aa21.26■□□□□ 0.99
PTPN13-205ENST00000502971 IL17FQ96PD4 163 aa21.26■□□□□ 0.99
PTPN13-205ENST00000502971 MYOCQ99972 504 aa21.26■□□□□ 0.99
PTPN13-205ENST00000502971 OSGEPL1Q9H4B0 414 aa21.26■□□□□ 0.99
PTPN13-205ENST00000502971 MOSPD1Q9UJG1 213 aa21.26■□□□□ 0.99
PTPN13-205ENST00000502971 GPSM3Q9Y4H4 160 aa21.26■□□□□ 0.99
PTPN13-205ENST00000502971 PCDHA9Q9Y5H5 950 aa21.26■□□□□ 0.99
PTPN13-205ENST00000502971 IDSP22304 550 aa21.25■□□□□ 0.99
PTPN13-205ENST00000502971 MSX2P35548 267 aaPredicted RBP21.25■□□□□ 0.99
PTPN13-205ENST00000502971 SESN3P58005 492 aa21.25■□□□□ 0.99
PTPN13-205ENST00000502971 CAPRIN1Q14444 709 aaKnown RBP21.25■□□□□ 0.99
PTPN13-205ENST00000502971 CATSPEREQ5SY80 951 aa21.25■□□□□ 0.99
PTPN13-205ENST00000502971 THEMIS2Q5TEJ8 643 aa21.25■□□□□ 0.99
PTPN13-205ENST00000502971 ZFP1Q6P2D0 407 aa21.25■□□□□ 0.99
PTPN13-205ENST00000502971 SLC2A7Q6PXP3 512 aa21.25■□□□□ 0.99
PTPN13-205ENST00000502971 ZNF852Q6ZMS4 543 aa21.25■□□□□ 0.99
PTPN13-205ENST00000502971 LPCAT2Q7L5N7 544 aa21.25■□□□□ 0.99
PTPN13-205ENST00000502971 LAS2Q8IYD9 372 aa21.25■□□□□ 0.99
PTPN13-205ENST00000502971 RAB42Q8N4Z0 105 aa21.25■□□□□ 0.99
PTPN13-205ENST00000502971 BHLHE22Q8NFJ8 381 aaPredicted RBP21.25■□□□□ 0.99
PTPN13-205ENST00000502971 HMGB4Q8WW32 186 aa21.25■□□□□ 0.99
PTPN13-205ENST00000502971 INSM2Q96T92 566 aaPredicted RBP21.25■□□□□ 0.99
PTPN13-205ENST00000502971 MTERF1Q99551 399 aaKnown RBP21.25■□□□□ 0.99
PTPN13-205ENST00000502971 PCBD2Q9H0N5 130 aa21.25■□□□□ 0.99
PTPN13-205ENST00000502971 USP36Q9P275 1121 aaKnown RBP21.25■□□□□ 0.99
PTPN13-205ENST00000502971 PLAGL1Q9UM63 463 aa21.25■□□□□ 0.99
PTPN13-205ENST00000502971 KCNK6Q9Y257 313 aa21.25■□□□□ 0.99
PTPN13-205ENST00000502971 DLGAP4Q9Y2H0 992 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms