RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 GPR78Q96P69 363 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 FCRL4Q96PJ5 515 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 PSMC3IPQ9P2W1 217 aaPredicted RBP24.16■■□□□ 1.46
LSM6-202ENST00000502781 ANKRD12Q6UB98 2062 aa24.15■■□□□ 1.46
LSM6-202ENST00000502781 IGKV1-8A0A0C4DH67 115 aa24.15■■□□□ 1.46
LSM6-202ENST00000502781 KLHL2O95198 593 aa24.15■■□□□ 1.46
LSM6-202ENST00000502781 CCNDBP1O95273 360 aa24.15■■□□□ 1.46
LSM6-202ENST00000502781 ANXA5P08758 320 aa24.15■■□□□ 1.46
LSM6-202ENST00000502781 NUDT17P0C025 328 aa24.15■■□□□ 1.46
LSM6-202ENST00000502781 TFEBP19484 476 aa24.15■■□□□ 1.46
LSM6-202ENST00000502781 CCND1P24385 295 aa24.15■■□□□ 1.46
LSM6-202ENST00000502781 KCNC1P48547 511 aa24.15■■□□□ 1.46
LSM6-202ENST00000502781 PCBP4P57723 403 aaKnown RBP24.15■■□□□ 1.46
LSM6-202ENST00000502781 NAA25Q14CX7 972 aa24.15■■□□□ 1.46
LSM6-202ENST00000502781 PPP1R3BQ86XI6 285 aa24.15■■□□□ 1.46
LSM6-202ENST00000502781 MREGQ8N565 214 aa24.15■■□□□ 1.46
LSM6-202ENST00000502781 MZB1Q8WU39 189 aa24.15■■□□□ 1.46
LSM6-202ENST00000502781 RHBDF1Q96CC6 855 aa24.15■■□□□ 1.46
LSM6-202ENST00000502781 PCBD2Q9H0N5 130 aa24.15■■□□□ 1.46
LSM6-202ENST00000502781 SLC6A20Q9NP91 592 aa24.15■■□□□ 1.46
LSM6-202ENST00000502781 MRPS30Q9NP92 439 aaKnown RBP24.15■■□□□ 1.46
LSM6-202ENST00000502781 EURLQ9NYK6 297 aa24.15■■□□□ 1.46
LSM6-202ENST00000502781 ANKMY1Q9P2S6 941 aa24.15■■□□□ 1.46
LSM6-202ENST00000502781 RARRES3Q9UL19 164 aa24.15■■□□□ 1.46
LSM6-202ENST00000502781 MAP1BP46821 2468 aaKnown RBP24.14■■□□□ 1.46
LSM6-202ENST00000502781 URB1O60287 2271 aaKnown RBP24.14■■□□□ 1.45
LSM6-202ENST00000502781 OR2A25A4D2G3 310 aa24.14■■□□□ 1.45
LSM6-202ENST00000502781 HCRTR1O43613 425 aa24.14■■□□□ 1.45
LSM6-202ENST00000502781 RFPL1O75677 317 aa24.14■■□□□ 1.45
LSM6-202ENST00000502781 HNMTP50135 292 aa24.14■■□□□ 1.45
LSM6-202ENST00000502781 TSTA3Q13630 321 aaPredicted RBP24.14■■□□□ 1.45
LSM6-202ENST00000502781 FAM83EQ2M2I3 478 aa24.14■■□□□ 1.45
LSM6-202ENST00000502781 LCTLQ6UWM7 567 aa24.14■■□□□ 1.45
LSM6-202ENST00000502781 FRA10AC1Q70Z53 315 aa24.14■■□□□ 1.45
LSM6-202ENST00000502781 DTX1Q86Y01 620 aa24.14■■□□□ 1.45
LSM6-202ENST00000502781 GPSM1Q86YR5 675 aa24.14■■□□□ 1.45
LSM6-202ENST00000502781 RHEBL1Q8TAI7 183 aa24.14■■□□□ 1.45
LSM6-202ENST00000502781 STAG3L4Q8TBR4 150 aa24.14■■□□□ 1.45
LSM6-202ENST00000502781 ATOH8Q96SQ7 321 aa24.14■■□□□ 1.45
LSM6-202ENST00000502781 DPH7Q9BTV6 452 aa24.14■■□□□ 1.45
LSM6-202ENST00000502781 ALG9Q9H6U8 611 aa24.14■■□□□ 1.45
LSM6-202ENST00000502781 RRAGDQ9NQL2 400 aaPredicted RBP24.14■■□□□ 1.45
LSM6-202ENST00000502781 TMEM184BQ9Y519 407 aaPredicted RBP24.14■■□□□ 1.45
LSM6-202ENST00000502781 IQANK1A0A1B0GTG1 560 aa24.13■■□□□ 1.45
LSM6-202ENST00000502781 H3BMH7 237 aa24.13■■□□□ 1.45
LSM6-202ENST00000502781 ACAP2Q15057 778 aa24.13■■□□□ 1.45
LSM6-202ENST00000502781 PRAMEF13Q5VWM6 474 aa24.13■■□□□ 1.45
LSM6-202ENST00000502781 ZNF425Q6IV72 752 aa24.13■■□□□ 1.45
LSM6-202ENST00000502781 CAPN13Q6MZZ7 669 aaPredicted RBP24.13■■□□□ 1.45
LSM6-202ENST00000502781 PLD6Q8N2A8 252 aaKnown RBP24.13■■□□□ 1.45
LSM6-202ENST00000502781 VPS11Q9H270 941 aa24.13■■□□□ 1.45
LSM6-202ENST00000502781 ENAMQ9NRM1 1142 aa24.13■■□□□ 1.45
LSM6-202ENST00000502781 KERAO60938 352 aa24.12■■□□□ 1.45
LSM6-202ENST00000502781 TIAF1O95411 115 aa24.12■■□□□ 1.45
LSM6-202ENST00000502781 COL6A2P12110 1019 aa24.12■■□□□ 1.45
LSM6-202ENST00000502781 NPPBP16860 134 aa24.12■■□□□ 1.45
LSM6-202ENST00000502781 PCM1Q15154 2024 aa24.12■■□□□ 1.45
LSM6-202ENST00000502781 PTCHD3Q3KNS1 767 aa24.12■■□□□ 1.45
LSM6-202ENST00000502781 THEMIS2Q5TEJ8 643 aa24.12■■□□□ 1.45
LSM6-202ENST00000502781 PWWP2BQ6NUJ5 590 aa24.12■■□□□ 1.45
LSM6-202ENST00000502781 PAQR7Q86WK9 346 aa24.12■■□□□ 1.45
LSM6-202ENST00000502781 KLHDC8AQ8IYD2 350 aa24.12■■□□□ 1.45
LSM6-202ENST00000502781 PDPRQ8NCN5 879 aa24.12■■□□□ 1.45
LSM6-202ENST00000502781 ZNF248Q8NDW4 579 aa24.12■■□□□ 1.45
LSM6-202ENST00000502781 OR1L3Q8NH93 324 aa24.12■■□□□ 1.45
LSM6-202ENST00000502781 PYCR2Q96C36 320 aa24.12■■□□□ 1.45
LSM6-202ENST00000502781 MED8Q96G25 268 aa24.12■■□□□ 1.45
LSM6-202ENST00000502781 OR4K3Q96R72 315 aa24.12■■□□□ 1.45
LSM6-202ENST00000502781 EGFL8Q99944 293 aa24.12■■□□□ 1.45
LSM6-202ENST00000502781 PLCD4Q9BRC7 762 aa24.12■■□□□ 1.45
LSM6-202ENST00000502781 FANCEQ9HB96 536 aa24.12■■□□□ 1.45
LSM6-202ENST00000502781 PILRAQ9UKJ1 303 aa24.12■■□□□ 1.45
LSM6-202ENST00000502781 RNF112Q9ULX5 631 aa24.12■■□□□ 1.45
LSM6-202ENST00000502781 TMEM150CB9EJG8 249 aa24.11■■□□□ 1.45
LSM6-202ENST00000502781 NRP2O60462 931 aa24.11■■□□□ 1.45
LSM6-202ENST00000502781 CTSVO60911 334 aa24.11■■□□□ 1.45
LSM6-202ENST00000502781 DLGAP3O95886 979 aa24.11■■□□□ 1.45
LSM6-202ENST00000502781 GGT5P36269 586 aa24.11■■□□□ 1.45
LSM6-202ENST00000502781 EIF2S3P41091 472 aaKnown RBP24.11■■□□□ 1.45
LSM6-202ENST00000502781 SLC6A12P48065 614 aa24.11■■□□□ 1.45
LSM6-202ENST00000502781 RELAQ04206 551 aa24.11■■□□□ 1.45
LSM6-202ENST00000502781 ZFAND4Q86XD8 727 aa24.11■■□□□ 1.45
LSM6-202ENST00000502781 ZNF285Q96NJ3 590 aa24.11■■□□□ 1.45
LSM6-202ENST00000502781 CUEDC1Q9NWM3 386 aaPredicted RBP24.11■■□□□ 1.45
LSM6-202ENST00000502781 PLCL2Q9UPR0 1127 aa24.11■■□□□ 1.45
LSM6-202ENST00000502781 RAXQ9Y2V3 346 aa24.11■■□□□ 1.45
LSM6-202ENST00000502781 SDK2Q58EX2 2172 aa24.11■■□□□ 1.45
LSM6-202ENST00000502781 STMND1H3BQB6 276 aa24.1■■□□□ 1.45
LSM6-202ENST00000502781 STK17BO94768 372 aa24.1■■□□□ 1.45
LSM6-202ENST00000502781 MTHFD2P13995 350 aa24.1■■□□□ 1.45
LSM6-202ENST00000502781 ZNF28P17035 718 aa24.1■■□□□ 1.45
LSM6-202ENST00000502781 HRH2P25021 359 aa24.1■■□□□ 1.45
LSM6-202ENST00000502781 DEFB110Q30KQ9 67 aa24.1■■□□□ 1.45
LSM6-202ENST00000502781 ZC3H12BQ5HYM0 836 aaKnown RBP24.1■■□□□ 1.45
LSM6-202ENST00000502781 RNF44Q7L0R7 432 aa24.1■■□□□ 1.45
LSM6-202ENST00000502781 TCAIMQ8N3R3 496 aa24.1■■□□□ 1.45
LSM6-202ENST00000502781 CABS1Q96KC9 395 aa24.1■■□□□ 1.45
LSM6-202ENST00000502781 HAUS8Q9BT25 410 aa24.1■■□□□ 1.45
LSM6-202ENST00000502781 ABCF3Q9NUQ8 709 aa24.1■■□□□ 1.45
LSM6-202ENST00000502781 SERTAD3Q9UJW9 196 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms