RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 H2AFVQ71UI9 128 aa15.66■□□□□ 0.1
VIM-208ENST00000497849 BZW1Q7L1Q6 419 aaKnown RBP15.66■□□□□ 0.1
VIM-208ENST00000497849 TAX1BP1Q86VP1 789 aa15.66■□□□□ 0.1
VIM-208ENST00000497849 DOLPP1Q86YN1 238 aa15.66■□□□□ 0.1
VIM-208ENST00000497849 CCDC170Q8IYT3 715 aa15.66■□□□□ 0.1
VIM-208ENST00000497849 ACRBPQ8NEB7 543 aa15.66■□□□□ 0.1
VIM-208ENST00000497849 ELMO1Q92556 727 aa15.66■□□□□ 0.1
VIM-208ENST00000497849 FOXC2Q99958 501 aa15.66■□□□□ 0.1
VIM-208ENST00000497849 C19orf43Q9BQ61 176 aa15.66■□□□□ 0.1
VIM-208ENST00000497849 DESI2Q9BSY9 194 aa15.66■□□□□ 0.1
VIM-208ENST00000497849 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.66■□□□□ 0.1
VIM-208ENST00000497849 STOX2Q9P2F5 926 aaPredicted RBP15.66■□□□□ 0.1
VIM-208ENST00000497849 LCMT1Q9UIC8 334 aa15.66■□□□□ 0.1
VIM-208ENST00000497849 LOC102723996A0A087X1L8 192 aa15.65■□□□□ 0.1
VIM-208ENST00000497849 A0A0U1RQJ8 604 aa15.65■□□□□ 0.1
VIM-208ENST00000497849 NPIPA5E9PKD4 350 aa15.65■□□□□ 0.1
VIM-208ENST00000497849 E9PLN8 166 aa15.65■□□□□ 0.1
VIM-208ENST00000497849 FFAR3O14843 346 aa15.65■□□□□ 0.1
VIM-208ENST00000497849 GPR42O15529 346 aa15.65■□□□□ 0.1
VIM-208ENST00000497849 SRPX2O60687 465 aaPredicted RBP15.65■□□□□ 0.1
VIM-208ENST00000497849 AP2A2O94973 939 aa15.65■□□□□ 0.1
VIM-208ENST00000497849 CRTAMO95727 393 aa15.65■□□□□ 0.1
VIM-208ENST00000497849 CD9P21926 228 aa15.65■□□□□ 0.1
VIM-208ENST00000497849 ALDH6A1Q02252 535 aaKnown RBP15.65■□□□□ 0.1
VIM-208ENST00000497849 GRB7Q14451 532 aa15.65■□□□□ 0.1
VIM-208ENST00000497849 SIAH3Q8IW03 269 aa15.65■□□□□ 0.1
VIM-208ENST00000497849 PIANPQ8IYJ0 282 aa15.65■□□□□ 0.1
VIM-208ENST00000497849 DNAAF3Q8N9W5 541 aa15.65■□□□□ 0.1
VIM-208ENST00000497849 IMMP1LQ96LU5 166 aa15.65■□□□□ 0.1
VIM-208ENST00000497849 IL17FQ96PD4 163 aa15.65■□□□□ 0.1
VIM-208ENST00000497849 VKORC1Q9BQB6 163 aa15.65■□□□□ 0.1
VIM-208ENST00000497849 HES7Q9BYE0 225 aa15.65■□□□□ 0.1
VIM-208ENST00000497849 NPDC1Q9NQX5 325 aaPredicted RBP15.65■□□□□ 0.1
VIM-208ENST00000497849 CIDEBQ9UHD4 219 aa15.65■□□□□ 0.1
VIM-208ENST00000497849 NPIPA1Q9UND3 350 aa15.65■□□□□ 0.1
VIM-208ENST00000497849 PCDHA13Q9Y5I0 950 aa15.65■□□□□ 0.1
VIM-208ENST00000497849 LOC105369274A0A096LPK9 316 aa15.64■□□□□ 0.09
VIM-208ENST00000497849 LOC102723532A0A0G2JNH3 316 aa15.64■□□□□ 0.09
VIM-208ENST00000497849 ASPDHA6ND91 283 aa15.64■□□□□ 0.09
VIM-208ENST00000497849 TMEM200CA6NKL6 621 aa15.64■□□□□ 0.09
VIM-208ENST00000497849 KDM1AO60341 852 aa15.64■□□□□ 0.09
VIM-208ENST00000497849 NRP2O60462 931 aa15.64■□□□□ 0.09
VIM-208ENST00000497849 CST8O60676 142 aa15.64■□□□□ 0.09
VIM-208ENST00000497849 S1PR4O95977 384 aa15.64■□□□□ 0.09
VIM-208ENST00000497849 EFNA3P52797 238 aa15.64■□□□□ 0.09
VIM-208ENST00000497849 GEMP55040 296 aa15.64■□□□□ 0.09
VIM-208ENST00000497849 CCZ1BP86790 482 aa15.64■□□□□ 0.09
VIM-208ENST00000497849 CCZ1P86791 482 aaPredicted RBP15.64■□□□□ 0.09
VIM-208ENST00000497849 HSF1Q00613 529 aa15.64■□□□□ 0.09
VIM-208ENST00000497849 TAZQ16635 292 aa15.64■□□□□ 0.09
VIM-208ENST00000497849 DBN1Q16643 649 aa15.64■□□□□ 0.09
VIM-208ENST00000497849 TAS2R42Q7RTR8 314 aa15.64■□□□□ 0.09
VIM-208ENST00000497849 OR4N4Q8N0Y3 316 aa15.64■□□□□ 0.09
VIM-208ENST00000497849 MDS2Q8NDY4 140 aa15.64■□□□□ 0.09
VIM-208ENST00000497849 SLC22A18Q96BI1 424 aa15.64■□□□□ 0.09
VIM-208ENST00000497849 DNAJC1Q96KC8 554 aaKnown RBP15.64■□□□□ 0.09
VIM-208ENST00000497849 C10orf90Q96M02 699 aa15.64■□□□□ 0.09
VIM-208ENST00000497849 SIGLEC12Q96PQ1 595 aa15.64■□□□□ 0.09
VIM-208ENST00000497849 TRIM51Q9BSJ1 452 aa15.64■□□□□ 0.09
VIM-208ENST00000497849 ZNF700Q9H0M5 742 aa15.64■□□□□ 0.09
VIM-208ENST00000497849 DLL4Q9NR61 685 aa15.64■□□□□ 0.09
VIM-208ENST00000497849 INTS7Q9NVH2 962 aaKnown RBP15.64■□□□□ 0.09
VIM-208ENST00000497849 ZC3H7BQ9UGR2 993 aaKnown RBP15.64■□□□□ 0.09
VIM-208ENST00000497849 RCCD1A6NED2 376 aa15.63■□□□□ 0.09
VIM-208ENST00000497849 TTI1O43156 1089 aa15.63■□□□□ 0.09
VIM-208ENST00000497849 ASNA1O43681 348 aa15.63■□□□□ 0.09
VIM-208ENST00000497849 SLCO2B1O94956 709 aa15.63■□□□□ 0.09
VIM-208ENST00000497849 ABOP16442 354 aa15.63■□□□□ 0.09
VIM-208ENST00000497849 FBLP22087 321 aaKnown RBP15.63■□□□□ 0.09
VIM-208ENST00000497849 CDKN2BP42772 138 aa15.63■□□□□ 0.09
VIM-208ENST00000497849 SPA17Q15506 151 aa15.63■□□□□ 0.09
VIM-208ENST00000497849 SF1Q15637 639 aaKnown RBP15.63■□□□□ 0.09
VIM-208ENST00000497849 DENND5AQ6IQ26 1287 aa15.63■□□□□ 0.09
VIM-208ENST00000497849 TMEM200AQ86VY9 491 aa15.63■□□□□ 0.09
VIM-208ENST00000497849 CHDHQ8NE62 594 aaPredicted RBP15.63■□□□□ 0.09
VIM-208ENST00000497849 CTNNBL1Q8WYA6 563 aaPredicted RBP15.63■□□□□ 0.09
VIM-208ENST00000497849 ZUFSPQ96AP4 578 aa15.63■□□□□ 0.09
VIM-208ENST00000497849 FRMD6Q96NE9 622 aa15.63■□□□□ 0.09
VIM-208ENST00000497849 QKIQ96PU8 341 aaKnown RBP eCLIP15.63■□□□□ 0.09
VIM-208ENST00000497849 GBA3Q9H227 469 aa15.63■□□□□ 0.09
VIM-208ENST00000497849 KCNF1Q9H3M0 494 aa15.63■□□□□ 0.09
VIM-208ENST00000497849 KLHL1Q9NR64 748 aa15.63■□□□□ 0.09
VIM-208ENST00000497849 SMARCAL1Q9NZC9 954 aa15.63■□□□□ 0.09
VIM-208ENST00000497849 TRHDEQ9UKU6 1024 aa15.63■□□□□ 0.09
VIM-208ENST00000497849 PPT2Q9UMR5 302 aa15.63■□□□□ 0.09
VIM-208ENST00000497849 RPH3AQ9Y2J0 694 aaPredicted RBP15.63■□□□□ 0.09
VIM-208ENST00000497849 ASB1Q9Y576 335 aa15.63■□□□□ 0.09
VIM-208ENST00000497849 NSD1Q96L73 2696 aaPredicted RBP15.63■□□□□ 0.09
VIM-208ENST00000497849 A0A0J9YVX5 310 aa15.62■□□□□ 0.09
VIM-208ENST00000497849 TARM1B6A8C7 271 aa15.62■□□□□ 0.09
VIM-208ENST00000497849 H7C0S8 307 aa15.62■□□□□ 0.09
VIM-208ENST00000497849 ANXA9O76027 345 aa15.62■□□□□ 0.09
VIM-208ENST00000497849 MLYCDO95822 493 aa15.62■□□□□ 0.09
VIM-208ENST00000497849 TMEM253P0C7T8 217 aa15.62■□□□□ 0.09
VIM-208ENST00000497849 ICAM2P13598 275 aa15.62■□□□□ 0.09
VIM-208ENST00000497849 PPP2R2AP63151 447 aa15.62■□□□□ 0.09
VIM-208ENST00000497849 TFF3Q07654 80 aa15.62■□□□□ 0.09
VIM-208ENST00000497849 FOXD4Q12950 439 aaPredicted RBP15.62■□□□□ 0.09
VIM-208ENST00000497849 TUBA3CQ13748 450 aa15.62■□□□□ 0.09
VIM-208ENST00000497849 TFDP2Q14188 446 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms