RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 FAM81BQ96LP2 452 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 RBM4BQ9BQ04 359 aaKnown RBP3.7□□□□□ -1.82
TRIM4-205ENST00000496896 SRSF8Q9BRL6 282 aaKnown RBP3.7□□□□□ -1.82
TRIM4-205ENST00000496896 TRIM15Q9C019 465 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 PPIL3Q9H2H8 161 aaKnown RBP3.7□□□□□ -1.82
TRIM4-205ENST00000496896 ARRDC1-AS1Q9H2J1 176 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 HRH4Q9H3N8 390 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 TAS2R14Q9NYV8 317 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 KLHL8Q9P2G9 620 aaPredicted RBP3.7□□□□□ -1.82
TRIM4-205ENST00000496896 CLIP2Q9UDT6 1046 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 SEC63Q9UGP8 760 aaKnown RBP3.7□□□□□ -1.82
TRIM4-205ENST00000496896 OSGIN1Q9UJX0 560 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 NME7Q9Y5B8 376 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 NPHP4O75161 1426 aaPredicted RBP3.7□□□□□ -1.82
TRIM4-205ENST00000496896 WDR19Q8NEZ3 1342 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 SH3TC1Q8TE82 1336 aa3.7□□□□□ -1.82
TRIM4-205ENST00000496896 KIF1AQ12756 1690 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 ADCY9O60503 1353 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 PALLDQ8WX93 1383 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 E9PI62 339 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 H3BQV1 296 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 H7C423 109 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 DNM1LO00429 736 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 KLF11O14901 512 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 PFKFB2O60825 505 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 RNASEH1O60930 286 aaKnown RBP3.69□□□□□ -1.82
TRIM4-205ENST00000496896 PTP4A3O75365 173 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 KHDRBS3O75525 346 aaKnown RBP3.69□□□□□ -1.82
TRIM4-205ENST00000496896 TRMUO75648 421 aaKnown RBP3.69□□□□□ -1.82
TRIM4-205ENST00000496896 TPOP07202 933 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 MMP9P14780 707 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 CA6P23280 308 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 ARSEP51690 589 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 SIRPAP78324 504 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 NCBP1Q09161 790 aaKnown RBP3.69□□□□□ -1.82
TRIM4-205ENST00000496896 PTPN14Q15678 1187 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 TPD52L1Q16890 204 aaPredicted RBP3.69□□□□□ -1.82
TRIM4-205ENST00000496896 FAM98BQ52LJ0 330 aaKnown RBP3.69□□□□□ -1.82
TRIM4-205ENST00000496896 MDH1BQ5I0G3 518 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 PLEKHS1Q5SXH7 462 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 ARHGEF16Q5VV41 709 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 TMED8Q6PL24 325 aaPredicted RBP3.69□□□□□ -1.82
TRIM4-205ENST00000496896 RSRC2Q7L4I2 434 aaKnown RBP3.69□□□□□ -1.82
TRIM4-205ENST00000496896 LRRC8AQ8IWT6 810 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 HPSE2Q8WWQ2 592 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 ANKRD9Q96BM1 317 aaPredicted RBP3.69□□□□□ -1.82
TRIM4-205ENST00000496896 ZNF274Q96GC6 653 aaPredicted RBP3.69□□□□□ -1.82
TRIM4-205ENST00000496896 NSL1Q96IY1 281 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 NEK1Q96PY6 1258 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 OR6C1Q96RD1 312 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 ATOH8Q96SQ7 321 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 BTBD10Q9BSF8 475 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 VN1R1Q9GZP7 353 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 CHMP1AQ9HD42 196 aaPredicted RBP3.69□□□□□ -1.82
TRIM4-205ENST00000496896 IL1RAPL2Q9NP60 686 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 ZNF701Q9NV72 531 aaPredicted RBP3.69□□□□□ -1.82
TRIM4-205ENST00000496896 ARGLU1Q9NWB6 273 aaPredicted RBP3.69□□□□□ -1.82
TRIM4-205ENST00000496896 CTNNA3Q9UI47 895 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 EXOGQ9Y2C4 368 aaKnown RBP3.69□□□□□ -1.82
TRIM4-205ENST00000496896 V9GYY5 206 aaPredicted RBP3.69□□□□□ -1.82
TRIM4-205ENST00000496896 PARP4Q9UKK3 1724 aaKnown RBP3.69□□□□□ -1.82
TRIM4-205ENST00000496896 PHLPP2Q6ZVD8 1323 aa3.69□□□□□ -1.82
TRIM4-205ENST00000496896 CARMIL3Q8ND23 1372 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 LOC101059948A0A1B0GTJ6 334 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 SLU7O95391 586 aaKnown RBP3.68□□□□□ -1.82
TRIM4-205ENST00000496896 YEATS4O95619 227 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 ZFYP08048 801 aaPredicted RBP3.68□□□□□ -1.82
TRIM4-205ENST00000496896 MAGEA11P43364 429 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 SUOXP51687 545 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 PNLIPRP2P54317 469 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 MFAP4P55083 255 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 EVCP57679 992 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 SNRPD1P62314 119 aaKnown RBP3.68□□□□□ -1.82
TRIM4-205ENST00000496896 IRF3Q14653 427 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 DLG2Q15700 870 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 C1orf141Q5JVX7 400 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 DCAF10Q5QP82 559 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 TEX35Q5T0J7 233 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 KRT79Q5XKE5 535 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 PWWP2BQ6NUJ5 590 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 BHLHB9Q6PI77 547 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 CCDC186Q7Z3E2 898 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 AACSQ86V21 672 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 SPEM1Q8N4L4 309 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 PI4KAP1Q8N8J0 262 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 TEX19Q8NA77 164 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 OR2T6Q8NHC8 308 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 RNF128Q8TEB7 428 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 DYRK2Q92630 601 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 PRAC1Q96KF2 57 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 TIGD1Q96MW7 591 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 TREX2Q9BQ50 279 aaPredicted RBP3.68□□□□□ -1.82
TRIM4-205ENST00000496896 C16orf70Q9BSU1 422 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 UBXN6Q9BZV1 441 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 LAT2Q9GZY6 243 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 SPATC1LQ9H0A9 340 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 KCNK15Q9H427 330 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 SMARCAD1Q9H4L7 1026 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 PLCXD1Q9NUJ7 323 aa3.68□□□□□ -1.82
TRIM4-205ENST00000496896 LARSQ9P2J5 1176 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms