RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-210	ENST00000496840	PRICKLE1	Q96MT3	831 aa	Predicted RBP	4.91	□□□□□ -1.62
TARDBP-210	ENST00000496840	TRIM6	Q9C030	488 aa	Predicted RBP	4.91	□□□□□ -1.62
TARDBP-210	ENST00000496840	PDE7B	Q9NP56	450 aa		4.91	□□□□□ -1.62
TARDBP-210	ENST00000496840	CHST11	Q9NPF2	352 aa		4.91	□□□□□ -1.62
TARDBP-210	ENST00000496840	TEX10	Q9NXF1	929 aa	Predicted RBP	4.91	□□□□□ -1.62
TARDBP-210	ENST00000496840	NSMCE4A	Q9NXX6	385 aa		4.91	□□□□□ -1.62
TARDBP-210	ENST00000496840	ARPC2	O15144	300 aa		4.9	□□□□□ -1.63
TARDBP-210	ENST00000496840	TRUB2	O95900	331 aa	Known RBP	4.9	□□□□□ -1.63
TARDBP-210	ENST00000496840	RAB40AL	P0C0E4	278 aa		4.9	□□□□□ -1.63
TARDBP-210	ENST00000496840	MPZ	P25189	248 aa		4.9	□□□□□ -1.63
TARDBP-210	ENST00000496840	PTGER3	P43115	390 aa		4.9	□□□□□ -1.63
TARDBP-210	ENST00000496840	HNRNPK	P61978	463 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
TARDBP-210	ENST00000496840	UBXN2A	P68543	259 aa		4.9	□□□□□ -1.63
TARDBP-210	ENST00000496840	ITGA7	Q13683	1181 aa		4.9	□□□□□ -1.63
TARDBP-210	ENST00000496840	ZNF74	Q16587	644 aa		4.9	□□□□□ -1.63
TARDBP-210	ENST00000496840	PHKG1	Q16816	387 aa		4.9	□□□□□ -1.63
TARDBP-210	ENST00000496840	MTHFSD	Q2M296	383 aa	Known RBP	4.9	□□□□□ -1.63
TARDBP-210	ENST00000496840	MMD2	Q8IY49	270 aa		4.9	□□□□□ -1.63
TARDBP-210	ENST00000496840		Q8NBF4	154 aa		4.9	□□□□□ -1.63
TARDBP-210	ENST00000496840	PIGB	Q92521	554 aa		4.9	□□□□□ -1.63
TARDBP-210	ENST00000496840	PTER	Q96BW5	349 aa		4.9	□□□□□ -1.63
TARDBP-210	ENST00000496840	PRMT7	Q9NVM4	692 aa	Predicted RBP	4.9	□□□□□ -1.63
TARDBP-210	ENST00000496840	DDX25	Q9UHL0	483 aa	Known RBP	4.9	□□□□□ -1.63
TARDBP-210	ENST00000496840	SERINC4	A6NH21	518 aa		4.89	□□□□□ -1.63
TARDBP-210	ENST00000496840		A8MV72	311 aa	Predicted RBP	4.89	□□□□□ -1.63
TARDBP-210	ENST00000496840	ERAL1	O75616	437 aa	Known RBP	4.89	□□□□□ -1.63
TARDBP-210	ENST00000496840	C22orf31	O95567	290 aa		4.89	□□□□□ -1.63
TARDBP-210	ENST00000496840	TSFM	P43897	325 aa	Known RBP	4.89	□□□□□ -1.63
TARDBP-210	ENST00000496840	PGF	P49763	221 aa		4.89	□□□□□ -1.63
TARDBP-210	ENST00000496840	ZNF774	Q6NX45	483 aa		4.89	□□□□□ -1.63
TARDBP-210	ENST00000496840	LEKR1	Q6ZMV7	388 aa		4.89	□□□□□ -1.63
TARDBP-210	ENST00000496840	KIF6	Q6ZMV9	814 aa		4.89	□□□□□ -1.63
TARDBP-210	ENST00000496840	NUP54	Q7Z3B4	507 aa		4.89	□□□□□ -1.63
TARDBP-210	ENST00000496840	SYT2	Q8N9I0	419 aa	Predicted RBP	4.89	□□□□□ -1.63
TARDBP-210	ENST00000496840	NXNL1	Q96CM4	212 aa		4.89	□□□□□ -1.63
TARDBP-210	ENST00000496840	C4orf45	Q96LM5	186 aa		4.89	□□□□□ -1.63
TARDBP-210	ENST00000496840	TLE6	Q9H808	572 aa		4.89	□□□□□ -1.63
TARDBP-210	ENST00000496840	ANKZF1	Q9H8Y5	726 aa		4.89	□□□□□ -1.63
TARDBP-210	ENST00000496840	MYNN	Q9NPC7	610 aa		4.89	□□□□□ -1.63
TARDBP-210	ENST00000496840	NDE1	Q9NXR1	346 aa		4.89	□□□□□ -1.63
TARDBP-210	ENST00000496840	TERF2IP	Q9NYB0	399 aa		4.89	□□□□□ -1.63
TARDBP-210	ENST00000496840	MUTYH	Q9UIF7	546 aa		4.89	□□□□□ -1.63
TARDBP-210	ENST00000496840	PCDHGB4	Q9UN71	923 aa		4.89	□□□□□ -1.63
TARDBP-210	ENST00000496840	PPIE	Q9UNP9	301 aa	Known RBP	4.89	□□□□□ -1.63
TARDBP-210	ENST00000496840	TMED3	Q9Y3Q3	217 aa		4.89	□□□□□ -1.63
TARDBP-210	ENST00000496840	CSNK1G3	Q9Y6M4	447 aa		4.89	□□□□□ -1.63
TARDBP-210	ENST00000496840	PGM3	O95394	542 aa		4.88	□□□□□ -1.63
TARDBP-210	ENST00000496840	IGHE	P01854	428 aa		4.88	□□□□□ -1.63
TARDBP-210	ENST00000496840	PTGER4	P35408	488 aa		4.88	□□□□□ -1.63
TARDBP-210	ENST00000496840	MAPK12	P53778	367 aa		4.88	□□□□□ -1.63
TARDBP-210	ENST00000496840	SPATA1	Q5VX52	437 aa		4.88	□□□□□ -1.63
TARDBP-210	ENST00000496840	CFAP161	Q6P656	301 aa		4.88	□□□□□ -1.63
TARDBP-210	ENST00000496840	CATSPERD	Q86XM0	798 aa		4.88	□□□□□ -1.63
TARDBP-210	ENST00000496840	NDUFAF2	Q8N183	169 aa		4.88	□□□□□ -1.63
TARDBP-210	ENST00000496840	TDRD5	Q8NAT2	981 aa	Known RBP	4.88	□□□□□ -1.63
TARDBP-210	ENST00000496840	RASL10A	Q92737	203 aa		4.88	□□□□□ -1.63
TARDBP-210	ENST00000496840	THOC1	Q96FV9	657 aa	Known RBP	4.88	□□□□□ -1.63
TARDBP-210	ENST00000496840	SPAG5	Q96R06	1193 aa		4.88	□□□□□ -1.63
TARDBP-210	ENST00000496840	LPAR4	Q99677	370 aa		4.88	□□□□□ -1.63
TARDBP-210	ENST00000496840	CCDC68	Q9H2F9	335 aa		4.88	□□□□□ -1.63
TARDBP-210	ENST00000496840	SNX8	Q9Y5X2	465 aa		4.88	□□□□□ -1.63
TARDBP-210	ENST00000496840	TEX28	O15482	410 aa		4.87	□□□□□ -1.63
TARDBP-210	ENST00000496840	GFPT2	O94808	682 aa		4.87	□□□□□ -1.63
TARDBP-210	ENST00000496840	LDHC	P07864	332 aa		4.87	□□□□□ -1.63
TARDBP-210	ENST00000496840	PAX8	Q06710	450 aa		4.87	□□□□□ -1.63
TARDBP-210	ENST00000496840	MCMDC2	Q4G0Z9	681 aa		4.87	□□□□□ -1.63
TARDBP-210	ENST00000496840	NOTUM	Q6P988	496 aa		4.87	□□□□□ -1.63
TARDBP-210	ENST00000496840	FRRS1	Q6ZNA5	592 aa		4.87	□□□□□ -1.63
TARDBP-210	ENST00000496840	LGI2	Q8N0V4	545 aa		4.87	□□□□□ -1.63
TARDBP-210	ENST00000496840	OR2L2	Q8NH16	312 aa		4.87	□□□□□ -1.63
TARDBP-210	ENST00000496840	ZNF830	Q96NB3	372 aa	Predicted RBP	4.87	□□□□□ -1.63
TARDBP-210	ENST00000496840	GAL3ST4	Q96RP7	486 aa		4.87	□□□□□ -1.63
TARDBP-210	ENST00000496840	RAB11FIP5	Q9BXF6	653 aa		4.87	□□□□□ -1.63
TARDBP-210	ENST00000496840	GOLPH3L	Q9H4A5	285 aa		4.87	□□□□□ -1.63
TARDBP-210	ENST00000496840		Q9H8V8	135 aa		4.87	□□□□□ -1.63
TARDBP-210	ENST00000496840	SWAP70	Q9UH65	585 aa		4.87	□□□□□ -1.63
TARDBP-210	ENST00000496840	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
TARDBP-210	ENST00000496840	AGRN	O00468	2067 aa		4.86	□□□□□ -1.63
TARDBP-210	ENST00000496840	LOC105371242	A0A075B767	164 aa		4.86	□□□□□ -1.63
TARDBP-210	ENST00000496840	HMGB1P1	B2RPK0	211 aa	Predicted RBP	4.86	□□□□□ -1.63
TARDBP-210	ENST00000496840	CEACAM4	O75871	244 aa		4.86	□□□□□ -1.63
TARDBP-210	ENST00000496840	BEST1	O76090	585 aa		4.86	□□□□□ -1.63
TARDBP-210	ENST00000496840	IRF2	P14316	349 aa		4.86	□□□□□ -1.63
TARDBP-210	ENST00000496840	OR4K1	Q8NGD4	311 aa		4.86	□□□□□ -1.63
TARDBP-210	ENST00000496840	MOB3A	Q96BX8	217 aa		4.86	□□□□□ -1.63
TARDBP-210	ENST00000496840	AGAP4	Q96P64	663 aa		4.86	□□□□□ -1.63
TARDBP-210	ENST00000496840	DGAT2	Q96PD7	388 aa		4.86	□□□□□ -1.63
TARDBP-210	ENST00000496840	SOST	Q9BQB4	213 aa		4.86	□□□□□ -1.63
TARDBP-210	ENST00000496840	ZMYND12	Q9H0C1	365 aa		4.86	□□□□□ -1.63
TARDBP-210	ENST00000496840	OLAH	Q9NV23	265 aa		4.86	□□□□□ -1.63
TARDBP-210	ENST00000496840	WIPI2	Q9Y4P8	454 aa		4.86	□□□□□ -1.63
TARDBP-210	ENST00000496840	PTGES	O14684	152 aa		4.85	□□□□□ -1.63
TARDBP-210	ENST00000496840	IGHV3-13	P01766	116 aa		4.85	□□□□□ -1.63
TARDBP-210	ENST00000496840	LMAN1	P49257	510 aa		4.85	□□□□□ -1.63
TARDBP-210	ENST00000496840	VAMP7	P51809	220 aa		4.85	□□□□□ -1.63
TARDBP-210	ENST00000496840	MYL7	Q01449	175 aa		4.85	□□□□□ -1.63
TARDBP-210	ENST00000496840	PRKG2	Q13237	762 aa		4.85	□□□□□ -1.63
TARDBP-210	ENST00000496840	MTF1	Q14872	753 aa		4.85	□□□□□ -1.63
TARDBP-210	ENST00000496840	TAB1	Q15750	504 aa		4.85	□□□□□ -1.63
TARDBP-210	ENST00000496840	EXT1	Q16394	746 aa		4.85	□□□□□ -1.63

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