RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 MED26O95402 600 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 MATN4O95460 622 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 ONECUT2O95948 504 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 ERVK-10P10266 1014 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 PKMP14618 531 aaKnown RBP12.38□□□□□ -0.43
FN1-226ENST00000496542 VARSP26640 1264 aaKnown RBP12.38□□□□□ -0.43
FN1-226ENST00000496542 CMPK1P30085 196 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 RPA3P35244 121 aaPredicted RBP12.38□□□□□ -0.43
FN1-226ENST00000496542 MAGEA6P43360 314 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 YBX1P67809 324 aaKnown RBP12.38□□□□□ -0.43
FN1-226ENST00000496542 CCZ1BP86790 482 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 CCZ1P86791 482 aaPredicted RBP12.38□□□□□ -0.43
FN1-226ENST00000496542 DHX34Q14147 1143 aaKnown RBP12.38□□□□□ -0.43
FN1-226ENST00000496542 GBX1Q14549 363 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 RBBP7Q16576 425 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 FAM214AQ32MH5 1076 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.38□□□□□ -0.43
FN1-226ENST00000496542 TTC27Q6P3X3 843 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 SUSD1Q6UWL2 747 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 CENPUQ71F23 418 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 RNF44Q7L0R7 432 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 CAND1Q86VP6 1230 aaKnown RBP12.38□□□□□ -0.43
FN1-226ENST00000496542 CILP2Q8IUL8 1156 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 LRRC8AQ8IWT6 810 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 PRSS58Q8IYP2 241 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 OR4N4Q8N0Y3 316 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 ZADH2Q8N4Q0 377 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 CISD2Q8N5K1 135 aaKnown RBP12.38□□□□□ -0.43
FN1-226ENST00000496542 OR2A1Q8NGT9 310 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 OR9A1PQ8NGU1 263 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 DPH7Q9BTV6 452 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 SLC26A1Q9H2B4 701 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 ZBTB20Q9HC78 741 aaPredicted RBP12.38□□□□□ -0.43
FN1-226ENST00000496542 FAM114A2Q9NRY5 505 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 STOX2Q9P2F5 926 aaPredicted RBP12.38□□□□□ -0.43
FN1-226ENST00000496542 ZC3H7BQ9UGR2 993 aaKnown RBP12.38□□□□□ -0.43
FN1-226ENST00000496542 NXT1Q9UKK6 140 aaKnown RBP12.38□□□□□ -0.43
FN1-226ENST00000496542 VPS9D1Q9Y2B5 631 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 PPP2R2CQ9Y2T4 447 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 KLK4Q9Y5K2 254 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 HS3ST3B1Q9Y662 390 aa12.38□□□□□ -0.43
FN1-226ENST00000496542 CTAGE9A4FU28 777 aa12.37□□□□□ -0.43
FN1-226ENST00000496542 GOLGA8MH3BSY2 632 aa12.37□□□□□ -0.43
FN1-226ENST00000496542 MYO1CO00159 1063 aa12.37□□□□□ -0.43
FN1-226ENST00000496542 NRDCO43847 1150 aa12.37□□□□□ -0.43
FN1-226ENST00000496542 SEMA7AO75326 666 aa12.37□□□□□ -0.43
FN1-226ENST00000496542 USP1O94782 785 aa12.37□□□□□ -0.43
FN1-226ENST00000496542 CATP04040 527 aaKnown RBP12.37□□□□□ -0.43
FN1-226ENST00000496542 ADARP55265 1226 aaKnown RBP12.37□□□□□ -0.43
FN1-226ENST00000496542 THOC5Q13769 683 aaKnown RBP12.37□□□□□ -0.43
FN1-226ENST00000496542 NAA25Q14CX7 972 aa12.37□□□□□ -0.43
FN1-226ENST00000496542 NR6A1Q15406 480 aa12.37□□□□□ -0.43
FN1-226ENST00000496542 EIF2S3LQ2VIR3 472 aaKnown RBP12.37□□□□□ -0.43
FN1-226ENST00000496542 KLHL38Q2WGJ6 581 aa12.37□□□□□ -0.43
FN1-226ENST00000496542 ANKRD20A4Q4UJ75 823 aa12.37□□□□□ -0.43
FN1-226ENST00000496542 IRAK1BP1Q5VVH5 260 aa12.37□□□□□ -0.43
FN1-226ENST00000496542 PRAMEF13Q5VWM6 474 aa12.37□□□□□ -0.43
FN1-226ENST00000496542 IGFL3Q6UXB1 125 aa12.37□□□□□ -0.43
FN1-226ENST00000496542 SPNS2Q8IVW8 549 aa12.37□□□□□ -0.43
FN1-226ENST00000496542 PRR7Q8TB68 274 aa12.37□□□□□ -0.43
FN1-226ENST00000496542 SMPDL3AQ92484 453 aa12.37□□□□□ -0.43
FN1-226ENST00000496542 MAGOHBQ96A72 148 aaKnown RBP12.37□□□□□ -0.43
FN1-226ENST00000496542 NACC2Q96BF6 587 aa12.37□□□□□ -0.43
FN1-226ENST00000496542 SNRNP40Q96DI7 357 aaKnown RBP12.37□□□□□ -0.43
FN1-226ENST00000496542 MS4A14Q96JA4 679 aa12.37□□□□□ -0.43
FN1-226ENST00000496542 CABS1Q96KC9 395 aa12.37□□□□□ -0.43
FN1-226ENST00000496542 ZFYVE21Q9BQ24 234 aa12.37□□□□□ -0.43
FN1-226ENST00000496542 CRB3Q9BUF7 120 aa12.37□□□□□ -0.43
FN1-226ENST00000496542 XAB2Q9HCS7 855 aaKnown RBP12.37□□□□□ -0.43
FN1-226ENST00000496542 ZNF304Q9HCX3 659 aa12.37□□□□□ -0.43
FN1-226ENST00000496542 MRPS30Q9NP92 439 aaKnown RBP12.37□□□□□ -0.43
FN1-226ENST00000496542 FBXO6Q9NRD1 293 aaPredicted RBP12.37□□□□□ -0.43
FN1-226ENST00000496542 ASF1BQ9NVP2 202 aa12.37□□□□□ -0.43
FN1-226ENST00000496542 INTS10Q9NVR2 710 aaKnown RBP12.37□□□□□ -0.43
FN1-226ENST00000496542 ZGRF1Q86YA3 2104 aa12.37□□□□□ -0.43
FN1-226ENST00000496542 FAM237BA0A1B0GVD1 139 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 OR2A25A4D2G3 310 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 SDR42E2A6NKP2 422 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 H0YGG7 62 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 PSIP1O75475 530 aaKnown RBP12.36□□□□□ -0.43
FN1-226ENST00000496542 ERGP11308 486 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 FBLP22087 321 aaKnown RBP12.36□□□□□ -0.43
FN1-226ENST00000496542 CLCN7P51798 805 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 SOX8P57073 446 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 ARF3P61204 181 aaPredicted RBP12.36□□□□□ -0.43
FN1-226ENST00000496542 OCA2Q04671 838 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 CUL1Q13616 776 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 HIF1AQ16665 826 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 TTLL9Q3SXZ7 439 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 TUBB8Q3ZCM7 444 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 ARMC3Q5W041 872 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 HIST2H2BCQ6DN03 193 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 KIRREL2Q6UWL6 708 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 DENND6AQ8IWF6 608 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 REXO1L1PQ8IX06 675 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 PARP9Q8IXQ6 854 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 OR11G2Q8NGC1 345 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 GIMAP7Q8NHV1 300 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 SSC4DQ8WTU2 575 aa12.36□□□□□ -0.43
FN1-226ENST00000496542 INPP5DQ92835 1189 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms