RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, human

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VTI1A-209	ENST00000496445	NAV2	Q8IVL1	2488 aa		13.65	□□□□□ -0.22
VTI1A-209	ENST00000496445	MAGEB16	A2A368	324 aa		13.65	□□□□□ -0.22
VTI1A-209	ENST00000496445	CTAGE9	A4FU28	777 aa		13.65	□□□□□ -0.22
VTI1A-209	ENST00000496445	TTLL8	A6PVC2	850 aa		13.65	□□□□□ -0.22
VTI1A-209	ENST00000496445	ALOX12B	O75342	701 aa		13.65	□□□□□ -0.22
VTI1A-209	ENST00000496445	OR1D4	P47884	311 aa		13.65	□□□□□ -0.22
VTI1A-209	ENST00000496445	MPP1	Q00013	466 aa		13.65	□□□□□ -0.22
VTI1A-209	ENST00000496445	THOC5	Q13769	683 aa	Known RBP	13.65	□□□□□ -0.22
VTI1A-209	ENST00000496445	UBAP2L	Q14157	1087 aa	Known RBP	13.65	□□□□□ -0.22
VTI1A-209	ENST00000496445	WASHC2D	Q5SRD0	308 aa		13.65	□□□□□ -0.22
VTI1A-209	ENST00000496445	RNASEH2B	Q5TBB1	312 aa	Known RBP	13.65	□□□□□ -0.22
VTI1A-209	ENST00000496445	VWA5B1	Q5TIE3	1220 aa		13.65	□□□□□ -0.22
VTI1A-209	ENST00000496445	SLC6A19	Q695T7	634 aa		13.65	□□□□□ -0.22
VTI1A-209	ENST00000496445	SUSD1	Q6UWL2	747 aa		13.65	□□□□□ -0.22
VTI1A-209	ENST00000496445	OVCH1	Q7RTY7	1134 aa		13.65	□□□□□ -0.22
VTI1A-209	ENST00000496445	GALNT16	Q8N428	558 aa		13.65	□□□□□ -0.22
VTI1A-209	ENST00000496445	CD200R1	Q8TD46	325 aa		13.65	□□□□□ -0.22
VTI1A-209	ENST00000496445	KCNJ9	Q92806	393 aa		13.65	□□□□□ -0.22
VTI1A-209	ENST00000496445	PTER	Q96BW5	349 aa		13.65	□□□□□ -0.22
VTI1A-209	ENST00000496445	C10orf90	Q96M02	699 aa		13.65	□□□□□ -0.22
VTI1A-209	ENST00000496445	NAP1L3	Q99457	506 aa	Predicted RBP	13.65	□□□□□ -0.22
VTI1A-209	ENST00000496445	ACAT2	Q9BWD1	397 aa		13.65	□□□□□ -0.22
VTI1A-209	ENST00000496445	WDR54	Q9H977	334 aa		13.65	□□□□□ -0.22
VTI1A-209	ENST00000496445	SNX12	Q9UMY4	172 aa		13.65	□□□□□ -0.22
VTI1A-209	ENST00000496445	FAM169A	Q9Y6X4	670 aa		13.65	□□□□□ -0.22
VTI1A-209	ENST00000496445	AGPS	O00116	658 aa		13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	PEX12	O00623	359 aa		13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	SOCS6	O14544	535 aa		13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	SRPX2	O60687	465 aa	Predicted RBP	13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	ALB	P02768	609 aa		13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	CAT	P04040	527 aa	Known RBP	13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	LONRF1	Q17RB8	773 aa		13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	SHISA6	Q6ZSJ9	500 aa		13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	NEK10	Q6ZWH5	1172 aa		13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	ATCAY	Q86WG3	371 aa		13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	HPS6	Q86YV9	775 aa		13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	PPIL6	Q8IXY8	311 aa		13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	CLEC1A	Q8NC01	280 aa		13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	PPFIBP2	Q8ND30	876 aa		13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	GRK7	Q8WTQ7	553 aa		13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	ZNF480	Q8WV37	535 aa		13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	SMPDL3A	Q92484	453 aa		13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	PNPLA2	Q96AD5	504 aa		13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	FER1L6-AS2	Q96M78	137 aa		13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	GPR21	Q99679	349 aa		13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	ZFYVE21	Q9BQ24	234 aa		13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	DPH7	Q9BTV6	452 aa		13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	SOX17	Q9H6I2	414 aa	Predicted RBP	13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	ZNF552	Q9H707	407 aa	Predicted RBP	13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	C20orf96	Q9NUD7	363 aa	Predicted RBP	13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	STOX2	Q9P2F5	926 aa	Predicted RBP	13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	ANKMY1	Q9P2S6	941 aa		13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	G3BP2	Q9UN86	482 aa	Known RBP	13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	MAP4K5	Q9Y4K4	846 aa		13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	MAU2	Q9Y6X3	613 aa		13.64	□□□□□ -0.23
VTI1A-209	ENST00000496445	VSTM2B	A6NLU5	285 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	CES2	O00748	559 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	BANF1	O75531	89 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	HAUS5	O94927	633 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	SLC16A8	O95907	504 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	MMP11	P24347	488 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	CMPK1	P30085	196 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	PNLIPRP1	P54315	467 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	TIAL1	Q01085	375 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	MYBPC3	Q14896	1274 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	ARHGAP19	Q14CB8	494 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	PRTG	Q2VWP7	1150 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	TTLL9	Q3SXZ7	439 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	ZNF425	Q6IV72	752 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	FBXO42	Q6P3S6	717 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	CYHR1	Q6ZMK1	362 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	PAQR7	Q86WK9	346 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	LRRC56	Q8IYG6	542 aa	Predicted RBP	13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	CPNE9	Q8IYJ1	553 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	FAM26E	Q8N5C1	309 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	FBXO15	Q8NCQ5	510 aa	Predicted RBP	13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	GALNT11	Q8NCW6	608 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	ASB11	Q8WXH4	323 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	PLCD4	Q9BRC7	762 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	MESP1	Q9BRJ9	268 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	GRPEL1	Q9HAV7	217 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	ZBTB20	Q9HC78	741 aa	Predicted RBP	13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	MRPS30	Q9NP92	439 aa	Known RBP	13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	FAM114A2	Q9NRY5	505 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	C5AR2	Q9P296	337 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	KLHL42	Q9P2K6	505 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	ZC3H7B	Q9UGR2	993 aa	Known RBP	13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	TAC3	Q9UHF0	121 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	CDC23	Q9UJX2	597 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	FBXL4	Q9UKA2	621 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	FBXO5	Q9UKT4	447 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	DHRS7	Q9Y394	339 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	HS3ST3B1	Q9Y662	390 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	MAD1L1	Q9Y6D9	718 aa		13.63	□□□□□ -0.23
VTI1A-209	ENST00000496445	GOLGA6L10	A0A0M3HER8	536 aa		13.62	□□□□□ -0.23
VTI1A-209	ENST00000496445	HYKK	A2RU49	373 aa		13.62	□□□□□ -0.23
VTI1A-209	ENST00000496445		E7ENX8	843 aa		13.62	□□□□□ -0.23
VTI1A-209	ENST00000496445		H0YGG7	62 aa		13.62	□□□□□ -0.23
VTI1A-209	ENST00000496445	GFY	I3L273	518 aa		13.62	□□□□□ -0.23
VTI1A-209	ENST00000496445	DNALI1	O14645	258 aa	Predicted RBP	13.62	□□□□□ -0.23

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