RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 IL1RAPL1Q9NZN1 696 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 SPATA7Q9P0W8 599 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 KLHL42Q9P2K6 505 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 SLC39A10Q9ULF5 831 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 POLHQ9Y253 713 aa12.7□□□□□ -0.38
ERCC3-209ENST00000494464 TCRBV9S1A1TA0A576 114 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 E5RI56 91 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 MATN4O95460 622 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 FURINP09958 794 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 RAB40ALP0C0E4 278 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 PGAM1P18669 254 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 BDKRB1P46663 353 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 SLC18A1P54219 525 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 RPS15P62841 145 aaKnown RBP12.69□□□□□ -0.38
ERCC3-209ENST00000494464 NFATC3Q12968 1075 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 ERV3-1Q14264 604 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 DEFB110Q30KQ9 67 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 DEFB109BQ30KR1 87 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 ZNF385CQ66K41 422 aaPredicted RBP12.69□□□□□ -0.38
ERCC3-209ENST00000494464 STEAP4Q687X5 459 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 CNSTQ6PJW8 725 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 ADGRD1Q6QNK2 874 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 FAM198BQ6UWH4 519 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 NEK10Q6ZWH5 1172 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 TRABD2AQ86V40 505 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 DENND6AQ8IWF6 608 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.69□□□□□ -0.38
ERCC3-209ENST00000494464 SKA2Q8WVK7 121 aaPredicted RBP12.69□□□□□ -0.38
ERCC3-209ENST00000494464 N4BP2L2Q92802 583 aaPredicted RBP12.69□□□□□ -0.38
ERCC3-209ENST00000494464 KCNJ9Q92806 393 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 CLIP3Q96DZ5 547 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 IL17FQ96PD4 163 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 PAFAH2Q99487 392 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 SELENOSQ9BQE4 189 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 FAM167BQ9BTA0 163 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 CHST8Q9H2A9 424 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 INTS7Q9NVH2 962 aaKnown RBP12.69□□□□□ -0.38
ERCC3-209ENST00000494464 ZC3H7BQ9UGR2 993 aaKnown RBP12.69□□□□□ -0.38
ERCC3-209ENST00000494464 RUVBL2Q9Y230 463 aaKnown RBP12.69□□□□□ -0.38
ERCC3-209ENST00000494464 KCNMB2Q9Y691 235 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 MAD1L1Q9Y6D9 718 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 COMMD10Q9Y6G5 202 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 AP1M2Q9Y6Q5 423 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 FAM169AQ9Y6X4 670 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 ZNF462Q96JM2 2506 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 FER1L5A0AVI2 2057 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 POC1B-GALNT4F8VUJ3 575 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 ZNF749O43361 778 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 PRICKLE3O43900 615 aaPredicted RBP12.69□□□□□ -0.38
ERCC3-209ENST00000494464 OR2B3O76000 313 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 C1QAP02745 245 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 CAPN1P07384 714 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 ERGP11308 486 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 CHRM3P20309 590 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 MAGP20916 626 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 SLC1A2P43004 574 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 CLCN7P51798 805 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 CRYMQ14894 314 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 UGT8Q16880 541 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 TTLL9Q3SXZ7 439 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 RHBDD2Q6NTF9 364 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 TLDC1Q6P9B6 456 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 CAPN12Q6ZSI9 719 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 CYP4X1Q8N118 509 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 DNAJC22Q8N4W6 341 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 PROKR1Q8TCW9 393 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 DENND1AQ8TEH3 1009 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 DCAKDQ8WVC6 231 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 FAM136AQ96C01 138 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 NLNQ9BYT8 704 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 SLC7A5P2Q9GIP4 190 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 CCDC68Q9H2F9 335 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 CCDC134Q9H6E4 229 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 PLAC1Q9HBJ0 212 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 SSU72Q9NP77 194 aaKnown RBP12.69□□□□□ -0.38
ERCC3-209ENST00000494464 FBXO6Q9NRD1 293 aaPredicted RBP12.69□□□□□ -0.38
ERCC3-209ENST00000494464 C20orf96Q9NUD7 363 aaPredicted RBP12.69□□□□□ -0.38
ERCC3-209ENST00000494464 CIDEBQ9UHD4 219 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 ZNF180Q9UJW8 692 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 SRPK3Q9UPE1 567 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 PLCL2Q9UPR0 1127 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 FARSAQ9Y285 508 aaKnown RBP12.69□□□□□ -0.38
ERCC3-209ENST00000494464 MED16Q9Y2X0 877 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 KLK4Q9Y5K2 254 aa12.69□□□□□ -0.38
ERCC3-209ENST00000494464 TLN1Q9Y490 2541 aaKnown RBP12.68□□□□□ -0.38
ERCC3-209ENST00000494464 SPTBP11277 2137 aa12.68□□□□□ -0.38
ERCC3-209ENST00000494464 CDC14CA4D256 554 aa12.68□□□□□ -0.38
ERCC3-209ENST00000494464 ZSCAN9O15535 394 aaPredicted RBP12.68□□□□□ -0.38
ERCC3-209ENST00000494464 HCRTR1O43613 425 aa12.68□□□□□ -0.38
ERCC3-209ENST00000494464 PSIP1O75475 530 aaKnown RBP12.68□□□□□ -0.38
ERCC3-209ENST00000494464 CHN1P15882 459 aa12.68□□□□□ -0.38
ERCC3-209ENST00000494464 MSH2P43246 934 aa12.68□□□□□ -0.38
ERCC3-209ENST00000494464 RPS18P62269 152 aaKnown RBP12.68□□□□□ -0.38
ERCC3-209ENST00000494464 CTBP1Q13363 440 aa12.68□□□□□ -0.38
ERCC3-209ENST00000494464 EFTUD2Q15029 972 aaKnown RBP eCLIP12.68□□□□□ -0.385e-6■■□□□ 13
ERCC3-209ENST00000494464 NCF4Q15080 339 aa12.68□□□□□ -0.38
ERCC3-209ENST00000494464 CYP2A13Q16696 494 aa12.68□□□□□ -0.38
ERCC3-209ENST00000494464 CCSMST1Q4G0I0 132 aa12.68□□□□□ -0.38
ERCC3-209ENST00000494464 ACSBG2Q5FVE4 666 aa12.68□□□□□ -0.38
ERCC3-209ENST00000494464 TAX1BP1Q86VP1 789 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms