RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 DLG1Q12959 904 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 NAA30Q147X3 362 aaPredicted RBP12□□□□□ -0.49
TRA2A-209ENST00000494255 TGFBIQ15582 683 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 OR4D1Q15615 310 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 LARP7Q4G0J3 582 aaKnown RBP eCLIP12□□□□□ -0.49
TRA2A-209ENST00000494255 ZC3H12BQ5HYM0 836 aaKnown RBP12□□□□□ -0.49
TRA2A-209ENST00000494255 CDKL4Q5MAI5 379 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 C17orf64Q86WR6 236 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 TCAIMQ8N3R3 496 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 OR56A3Q8NH54 315 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 SNIP1Q8TAD8 396 aaKnown RBP12□□□□□ -0.49
TRA2A-209ENST00000494255 EXT2Q93063 718 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 PMEPA1Q969W9 287 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 PTERQ96BW5 349 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 CNTNAP3BQ96NU0 1288 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 FCRL4Q96PJ5 515 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 HAUS8Q9BT25 410 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 DPH7Q9BTV6 452 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 SGPP1Q9BX95 441 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 CNTNAP3Q9BZ76 1288 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 ANKMY1Q9P2S6 941 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 TBK1Q9UHD2 729 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 SNX7Q9UNH6 387 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 PLCL2Q9UPR0 1127 aa12□□□□□ -0.49
TRA2A-209ENST00000494255 SYCE1LA8MT33 242 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 SUPT3HB4E1H0 165 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 STMND1H3BQB6 276 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 SUPT3HO75486 399 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 CAPNS1P04632 268 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 COL6A2P12110 1019 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 HRH2P25021 359 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 SLCO1A2P46721 670 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 GLRBP48167 497 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 ITGA1P56199 1179 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 ACAP2Q15057 778 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 TSNAXIP1Q2TAA8 658 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 DEFB110Q30KQ9 67 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 FCRL6Q6DN72 434 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 SULT1C3Q6IMI6 304 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 LCTLQ6UWM7 567 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 TIFABQ6ZNK6 161 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 ADCK2Q7Z695 626 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 ISCA2Q86U28 154 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 PROSER1Q86XN7 944 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 TDRPQ86YL5 185 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 TMEM126BQ8IUX1 230 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 GPR135Q8IZ08 494 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 DNAJC22Q8N4W6 341 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 KDF1Q8NAX2 398 aaPredicted RBP11.99□□□□□ -0.49
TRA2A-209ENST00000494255 ZNF248Q8NDW4 579 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 PYCR2Q96C36 320 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 RHBDF1Q96CC6 855 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 ULBP3Q9BZM4 244 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 CNOT10Q9H9A5 744 aaKnown RBP11.99□□□□□ -0.49
TRA2A-209ENST00000494255 FAM60AQ9NP50 221 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 SLC6A20Q9NP91 592 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 IRAK4Q9NWZ3 460 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 WWOXQ9NZC7 414 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 NUDT4Q9NZJ9 180 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 ACSL6Q9UKU0 697 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 KLK4Q9Y5K2 254 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 SPEGQ15772 3267 aa11.99□□□□□ -0.49
TRA2A-209ENST00000494255 RRP8O43159 456 aaKnown RBP11.98□□□□□ -0.49
TRA2A-209ENST00000494255 TLX3O43711 291 aaPredicted RBP11.98□□□□□ -0.49
TRA2A-209ENST00000494255 KERAO60938 352 aa11.98□□□□□ -0.49
TRA2A-209ENST00000494255 CDH16O75309 829 aa11.98□□□□□ -0.49
TRA2A-209ENST00000494255 ERLIN1O75477 346 aa11.98□□□□□ -0.49
TRA2A-209ENST00000494255 STK17BO94768 372 aa11.98□□□□□ -0.49
TRA2A-209ENST00000494255 MT-ND3P03897 115 aa11.98□□□□□ -0.49
TRA2A-209ENST00000494255 NUDT17P0C025 328 aa11.98□□□□□ -0.49
TRA2A-209ENST00000494255 PTCHD3Q3KNS1 767 aa11.98□□□□□ -0.49
TRA2A-209ENST00000494255 ZFAND4Q86XD8 727 aa11.98□□□□□ -0.49
TRA2A-209ENST00000494255 MCATQ8IVS2 390 aaKnown RBP11.98□□□□□ -0.49
TRA2A-209ENST00000494255 MREGQ8N565 214 aa11.98□□□□□ -0.49
TRA2A-209ENST00000494255 RHEBL1Q8TAI7 183 aa11.98□□□□□ -0.49
TRA2A-209ENST00000494255 EPS8L3Q8TE67 593 aaKnown RBP11.98□□□□□ -0.49
TRA2A-209ENST00000494255 KCNE4Q8WWG9 221 aa11.98□□□□□ -0.49
TRA2A-209ENST00000494255 ZNF501Q96CX3 271 aaPredicted RBP11.98□□□□□ -0.49
TRA2A-209ENST00000494255 SCYL1Q96KG9 808 aa11.98□□□□□ -0.49
TRA2A-209ENST00000494255 PLCD4Q9BRC7 762 aa11.98□□□□□ -0.49
TRA2A-209ENST00000494255 PCMTD2Q9NV79 361 aa11.98□□□□□ -0.49
TRA2A-209ENST00000494255 DYRK1BQ9Y463 629 aa11.98□□□□□ -0.49
TRA2A-209ENST00000494255 OR2A25A4D2G3 310 aa11.97□□□□□ -0.49
TRA2A-209ENST00000494255 RFPL1O75677 317 aa11.97□□□□□ -0.49
TRA2A-209ENST00000494255 OR2B3O76000 313 aa11.97□□□□□ -0.49
TRA2A-209ENST00000494255 IPO13O94829 963 aaKnown RBP11.97□□□□□ -0.49
TRA2A-209ENST00000494255 KIAA0754O94854 1291 aa11.97□□□□□ -0.49
TRA2A-209ENST00000494255 RBP1P09455 135 aa11.97□□□□□ -0.49
TRA2A-209ENST00000494255 KRT15P19012 456 aa11.97□□□□□ -0.49
TRA2A-209ENST00000494255 YBX1P67809 324 aaKnown RBP11.97□□□□□ -0.49
TRA2A-209ENST00000494255 RASA2Q15283 850 aa11.97□□□□□ -0.49
TRA2A-209ENST00000494255 LRRC69Q6ZNQ3 347 aa11.97□□□□□ -0.49
TRA2A-209ENST00000494255 THOC6Q86W42 341 aaKnown RBP11.97□□□□□ -0.49
TRA2A-209ENST00000494255 RIBC1Q8N443 379 aaPredicted RBP11.97□□□□□ -0.49
TRA2A-209ENST00000494255 PDPRQ8NCN5 879 aa11.97□□□□□ -0.49
TRA2A-209ENST00000494255 OR1L3Q8NH93 324 aa11.97□□□□□ -0.49
TRA2A-209ENST00000494255 ACMSDQ8TDX5 336 aa11.97□□□□□ -0.49
TRA2A-209ENST00000494255 NAF1Q96HR8 494 aaKnown RBP11.97□□□□□ -0.49
TRA2A-209ENST00000494255 DCBLD2Q96PD2 775 aa11.97□□□□□ -0.49
TRA2A-209ENST00000494255 ATOH8Q96SQ7 321 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms