RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 VEGFCP49767 419 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 NT5C2P49902 561 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 KIAA1024LP59773 190 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 ST8SIA6P61647 398 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 HNRNPKP61978 463 aaKnown RBP eCLIP2.2□□□□□ -2.06
LMNB1-207ENST00000494185 IL1RL1Q01638 556 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 NPRL3Q12980 569 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 CBX3Q13185 183 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 ITGA9Q13797 1035 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 PPA1Q15181 289 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 RPS6KA1Q15418 735 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 SLC39A12Q504Y0 691 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 TECRLQ5HYJ1 363 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 RNASEH2BQ5TBB1 312 aaKnown RBP2.2□□□□□ -2.06
LMNB1-207ENST00000494185 ARHGEF16Q5VV41 709 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 TXNRD3NBQ6F5E7 133 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 NHLRC1Q6VVB1 395 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 STXBP4Q6ZWJ1 553 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 RABEPKQ7Z6M1 372 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 TLK2Q86UE8 772 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 DZIP1Q86YF9 867 aaKnown RBP2.2□□□□□ -2.06
LMNB1-207ENST00000494185 KLHL7Q8IXQ5 586 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 LMNTD2Q8IXW0 634 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 CLYBLQ8N0X4 340 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 RYBPQ8N488 228 aaPredicted RBP2.2□□□□□ -2.06
LMNB1-207ENST00000494185 HDDC3Q8N4P3 179 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 L3MBTL4Q8NA19 623 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 OR2T12Q8NG77 320 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 SEPT1Q8WYJ6 367 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 SUSD6Q92537 303 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 RAD54LQ92698 747 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 BCL2L2Q92843 193 aaPredicted RBP2.2□□□□□ -2.06
LMNB1-207ENST00000494185 TMEM143Q96AN5 459 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 SNRNP40Q96DI7 357 aaKnown RBP2.2□□□□□ -2.06
LMNB1-207ENST00000494185 ALG14Q96F25 216 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 EEF2KMTQ96G04 330 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 SGK494Q96LW2 274 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 ZNF582Q96NG8 517 aaPredicted RBP2.2□□□□□ -2.06
LMNB1-207ENST00000494185 OR6C1Q96RD1 312 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 FEVQ99581 238 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 OLFM1Q99784 485 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 CACNG6Q9BXT2 260 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 SLC5A7Q9GZV3 580 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 FN3KQ9H479 309 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 SLA2Q9H6Q3 261 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 LMAN1LQ9HAT1 526 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 PPANQ9NQ55 473 aaKnown RBP2.2□□□□□ -2.06
LMNB1-207ENST00000494185 PDRG1Q9NUG6 133 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 HPF1Q9NWY4 346 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 COMMD8Q9NX08 183 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 POLLQ9UGP5 575 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 ATP6V0A2Q9Y487 856 aa2.2□□□□□ -2.06
LMNB1-207ENST00000494185 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 RNF103-CHMP3A0A140T963 221 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 HEPACAM2A8MVW5 462 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 FAM86B1E9PN63 330 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 RNF103O00237 685 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 CPLX1O14810 134 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 KLF11O14901 512 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 PRPSAP2O60256 369 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 OR10H2O60403 315 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 PRKRAO75569 313 aaKnown RBP2.19□□□□□ -2.06
LMNB1-207ENST00000494185 MOCS3O95396 460 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 EML2O95834 649 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 SLC16A8O95907 504 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 RLN1P04808 185 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 HMBSP08397 361 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 FAM86B2P0C5J1 330 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 LIFP15018 202 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 DESP17661 470 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 GAP43P17677 238 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 ACAT1P24752 427 aaKnown RBP2.19□□□□□ -2.06
LMNB1-207ENST00000494185 MAPK3P27361 379 aaPredicted RBP2.19□□□□□ -2.06
LMNB1-207ENST00000494185 EPHA2P29317 976 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 CRKLP46109 303 aaKnown RBP2.19□□□□□ -2.06
LMNB1-207ENST00000494185 ATP12AP54707 1039 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 SLC12A3P55017 1021 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 EVCP57679 992 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 TAF7Q15545 349 aaPredicted RBP2.19□□□□□ -2.06
LMNB1-207ENST00000494185 TEAD2Q15562 447 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 SGSM1Q2NKQ1 1148 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 TMEM30BQ3MIR4 351 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 DNAJC21Q5F1R6 531 aaKnown RBP2.19□□□□□ -2.06
LMNB1-207ENST00000494185 MDH1BQ5I0G3 518 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 WDR38Q5JTN6 314 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 TOR1AIP1Q5JTV8 583 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 CCDC158Q5M9N0 1113 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 ZNF790Q6PG37 636 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 FIGLAQ6QHK4 219 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 TMEM270Q6UE05 265 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 ENPP7Q6UWV6 458 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 ABRAXAS1Q6UWZ7 409 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 RBMS3Q6XE24 437 aaKnown RBP2.19□□□□□ -2.06
LMNB1-207ENST00000494185 ZBTB49Q6ZSB9 765 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 SH2D5Q6ZV89 423 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 USP43Q70EL4 1123 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 DGLUCYQ7Z3D6 616 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 PHLDB2Q86SQ0 1253 aa2.19□□□□□ -2.06
LMNB1-207ENST00000494185 TRPT1Q86TN4 253 aaKnown RBP2.19□□□□□ -2.06
LMNB1-207ENST00000494185 CNTN4Q8IWV2 1026 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms